Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 2.3e-224 781.9 398 100.0
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 1.6e-206 722.6 400 91.8
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 3.7e-203 711.4 400 91.2
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 1.2e-201 706.4 401 91.0
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 5.3e-181 637.9 397 81.6
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 6.7e-176 620.9 415 77.6
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 8.7e-176 620.5 399 80.2
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 5.6e-175 617.8 418 77.0
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 6.2e-174 614.4 400 78.8
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 5.3e-173 611.3 400 78.5
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 1.7e-171 606.3 400 78.0
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 8.4e-163 577.4 412 72.6
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.2e-161 573.5 414 72.7
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 1.0e-160 570.5 413 72.2
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 1.3e-160 570.1 413 72.2
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.3e-160 570.1 414 72.5
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 1.8e-160 569.7 408 73.3
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 3.9e-160 568.5 416 72.1
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 7.4e-159 564.3 410 71.2
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 2.8e-158 562.4 413 70.9
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 1.1e-157 560.5 417 70.7
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 1.1e-157 560.5 412 70.6
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 1.1e-157 560.5 416 70.7
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 1.8e-157 559.7 411 71.3
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 4.1e-157 558.5 407 69.8
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 9.0e-157 557.4 416 70.0
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 1.2e-156 557.0 413 70.0
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 1.5e-156 556.6 418 70.6
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.0e-156 556.2 439 68.3
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 2.6e-156 555.8 416 69.7
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 3.4e-156 555.4 416 69.5
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 4.5e-156 555.1 416 69.7
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 5.9e-156 554.7 414 69.1
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 7.7e-156 554.3 415 68.7
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 3.8e-155 552.0 412 70.1
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 6.5e-155 551.2 412 70.9
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 8.5e-155 550.8 425 67.3
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 1.9e-154 549.7 416 68.5
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 4.2e-154 548.5 415 68.7
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 1.6e-153 546.6 409 68.2
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 2.1e-153 546.2 409 68.0
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 2.1e-153 546.2 408 70.3
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 4.6e-153 545.0 417 68.1
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 1.8e-152 543.1 398 69.6
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 6.7e-152 541.2 402 68.7
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 3.3e-151 538.9 416 67.8
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 3.3e-151 538.9 415 68.0
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 4.3e-151 538.5 415 68.0
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 5.7e-151 538.1 402 68.4
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 9.7e-151 537.3 415 67.2
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 1.7e-150 536.6 417 67.9
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 6.3e-150 534.6 399 70.4
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 8.2e-150 534.3 409 68.7
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 8.2e-150 534.3 409 68.7
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 8.2e-150 534.3 409 68.7
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 1.4e-149 533.5 416 67.5
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 2.4e-149 532.7 416 66.6
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 2.4e-149 532.7 415 67.0
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 3.1e-149 532.3 401 67.8
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 3.1e-149 532.3 413 67.8
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 5.3e-149 531.6 395 69.6
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 5.3e-149 531.6 395 69.6
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 6.9e-149 531.2 411 68.4
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 6.9e-149 531.2 413 67.8
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 1.5e-148 530.0 395 68.1
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 1.5e-148 530.0 413 67.8
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 2.6e-148 529.3 394 68.3
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 2.6e-148 529.3 395 69.4
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 2.2e-147 526.2 415 65.1
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 2.9e-147 525.8 415 65.3
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 6.5e-147 524.6 413 66.8
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 2.6e-140 502.7 418 63.6
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 4.5e-140 501.9 404 65.6
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 8.5e-139 497.7 406 65.5
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 4.7e-137 491.9 393 65.6
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 1.4e-136 490.3 408 63.7
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 5.2e-136 488.4 392 65.3
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 8.8e-136 487.6 398 64.8
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 1.1e-135 487.3 397 66.0
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 1.2e-132 477.2 390 64.4
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 1.7e-131 473.4 384 64.6
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 2.2e-131 473.0 394 64.2
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 3.2e-130 469.2 404 62.9
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 5.5e-130 468.4 381 64.8
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 5.2e-128 461.8 410 60.5
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 1.0e-123 447.6 470 54.7
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.3e-123 447.2 394 62.2
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 9.4e-122 441.0 408 58.6
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 1.2e-121 440.7 413 59.1
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 1.6e-121 440.3 371 62.5
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 2.1e-121 439.9 405 59.5
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 1.0e-120 437.6 393 60.8
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 3.0e-120 436.0 414 58.0
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 9.5e-114 414.5 393 57.8
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 1.3e-110 404.1 255 79.6
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 5.9e-108 395.2 359 59.1
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 7.5e-103 378.3 256 75.0
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 4.9e-102 375.6 257 76.3
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 4.9e-102 375.6 466 45.9
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 1.0e-99 367.9 235 78.3
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 5.4e-93 345.5 271 68.6
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 7.8e-92 341.7 244 72.5
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 1.9e-90 337.0 398 49.5
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 2.6e-87 326.6 397 48.4
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 3.5e-84 316.2 463 39.1
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 5.6e-82 308.9 464 41.2
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 1.4e-69 267.7 422 38.6
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 5.4e-69 265.8 290 53.1
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 4.5e-63 246.1 182 69.8
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 5.1e-43 179.5 163 52.1
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 4.6e-36 156.4 168 50.0
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 2.2e-33 147.5 188 47.3
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 5.3e-32 142.9 490 25.5
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 5.9e-31 139.4 482 26.8
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 6.7e-27 125.9 432 26.2
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 1.4e-24 118.2 201 35.3
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 1.5e-21 108.2 70 77.1
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 2.1e-20 104.4 98 59.2
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 3.6e-20 103.6 108 50.0
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 4.4e-10 70.1 96 38.5
VMungo0251G0458 Vigna mungo HOM05D006687 ORTHO05D008379 6.5e-06 56.2 57 49.1


User provided reference genes

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