Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3791 Trifolium pratense HOM05D003792 ORTHO05D003195 2.5e-93 345.5 183 100.0
Medtr1g019360 Medicago truncatula HOM05D003792 ORTHO05D003195 2.7e-71 272.3 181 77.3
Psat6g012520 Pisum sativum HOM05D003792 ORTHO05D003195 4.4e-50 201.8 184 65.8
Glyma.14G083000 Glycine max HOM05D003792 ORTHO05D003195 8.1e-44 181.0 189 58.2
Glyma.17G242100 Glycine max HOM05D003792 ORTHO05D003195 2.4e-43 179.5 189 57.7
Lj5g0016368 Lotus japonicus HOM05D003792 ORTHO05D003195 2.9e-41 172.6 180 56.7
VMungo0647G0635 Vigna mungo HOM05D003792 ORTHO05D003195 4.9e-41 171.8 179 58.1
Phvul.001G022200 Phaseolus vulgaris HOM05D003792 ORTHO05D003195 2.4e-40 169.5 194 55.7
Lalb_Chr14g0368651 Lupinus albus HOM05D003792 ORTHO05D003195 3.3e-37 159.1 190 51.6
Lalb_Chr22g0355111 Lupinus albus HOM05D003792 ORTHO05D003195 5.6e-37 158.3 187 51.9
arahy.Tifrunner.gnm1.ann1.ND8QY1 Arachis hypogaea HOM05D003792 ORTHO05D003195 8.4e-33 144.4 192 50.0
arahy.Tifrunner.gnm1.ann1.V1SQNE Arachis hypogaea HOM05D003792 ORTHO05D003195 8.4e-33 144.4 192 50.0
FAN15G1261 Fragaria x ananassa HOM05D003792 ORTHO05D003195 8.7e-30 134.4 191 46.1
FvH4_2g34400 Fragaria vesca HOM05D003792 ORTHO05D003195 1.5e-29 133.7 191 46.6
RcHm_v2.0_Chr6g0307971 Rosa chinensis HOM05D003792 ORTHO05D003195 4.3e-29 132.1 191 46.1
QL02p004753 Quercus lobata HOM05D003792 ORTHO05D003195 2.4e-27 126.3 186 43.5
Prupe.1G435100 Prunus persica HOM05D003792 ORTHO05D003195 3.1e-27 125.9 195 43.1
MD08G1101100 Malus domestica HOM05D003792 ORTHO05D003195 9.0e-27 124.4 187 42.8
MD15G1082300 Malus domestica HOM05D003792 ORTHO05D003195 9.0e-27 124.4 198 42.4
Dinv39314 Davidia involucrata HOM05D003792 ORTHO05D003195 5.5e-24 115.2 194 40.2
GSVIVG01009490001 Vitis vinifera HOM05D003792 ORTHO05D003195 9.3e-24 114.4 193 40.4
TAR381G1051 Trochodendron aralioides HOM05D003792 ORTHO05D003195 3.5e-23 112.5 192 43.2
CiPaw.16G043500 Carya illinoinensis HOM05D003792 ORTHO05D003195 5.1e-22 108.6 191 40.8
Cfa018558 Carpinus fangiana HOM05D000207 ORTHO05D000606 1.5e-21 107.1 180 41.7
Potri.014G029000 Populus trichocarpa HOM05D003792 ORTHO05D003195 2.5e-21 106.3 190 37.9
Actinidia22631 Actinidia chinensis HOM05D003792 ORTHO05D003195 7.4e-21 104.8 197 41.1
TWI36G0999 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 7.4e-21 104.8 190 38.4
CSS0021091 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 1.3e-20 104.0 194 38.7
Dinv35957 Davidia involucrata HOM05D003792 ORTHO05D003195 1.3e-20 104.0 192 35.9
COL.COLO4_26514 Corchorus olitorius HOM05D003792 ORTHO05D003195 1.6e-20 103.6 179 40.2
Manes.18G037600 Manihot esculenta HOM05D003792 ORTHO05D003195 1.6e-20 103.6 187 38.5
TAR376G0615 Trochodendron aralioides HOM05D003792 ORTHO05D003195 2.8e-20 102.8 188 37.2
Gohir.A06G018700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 3.7e-20 102.4 180 40.6
PSO210G6487 Papaver somniferum HOM05D003792 ORTHO05D003195 1.8e-19 100.1 193 39.4
Gohir.D06G017100 Gossypium hirsutum HOM05D003792 ORTHO05D003195 4.0e-19 99.0 163 41.7
Gorai.010G020000 Gossypium raimondii HOM05D003792 ORTHO05D003195 4.0e-19 99.0 163 41.7
DCAR_019451 Daucus carota HOM05D003792 ORTHO05D003195 5.3e-19 98.6 181 39.2
Rhsim07G0228200 Rhododendron simsii HOM05D003792 ORTHO05D003195 6.9e-19 98.2 230 33.9
GSVIVG01024176001 Vitis vinifera HOM05D003792 ORTHO05D003195 6.9e-19 98.2 182 38.5
Duzib093G2220 Durio zibethinus HOM05D003792 ORTHO05D003195 1.2e-18 97.4 180 38.3
Cpa.g.sc49.18 Carica papaya HOM05D003792 ORTHO05D003195 2.0e-18 96.7 185 35.7
MSTRG.24332 Avicennia marina HOM05D003792 ORTHO05D003195 2.6e-18 96.3 187 38.0
Rhsim06G0050200 Rhododendron simsii HOM05D003792 ORTHO05D003195 2.6e-18 96.3 197 35.0
Migut.N02709 Erythranthe guttata HOM05D003792 ORTHO05D003195 3.4e-18 95.9 177 37.9
TWI36G1706 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 3.4e-18 95.9 190 35.8
Duzib116G0066 Durio zibethinus HOM05D003792 ORTHO05D003195 5.8e-18 95.1 180 38.3
Gohir.D05G205900 Gossypium hirsutum HOM05D003792 ORTHO05D003195 5.8e-18 95.1 178 41.6
Gorai.009G212200 Gossypium raimondii HOM05D003792 ORTHO05D003195 5.8e-18 95.1 178 41.0
Thecc.08G006700 Theobroma cacao HOM05D003792 ORTHO05D003195 5.8e-18 95.1 168 40.5
Sabra14G0019900 Salix brachista HOM05D003792 ORTHO05D003195 7.6e-18 94.7 191 36.1
Nn5g30305 Nelumbo nucifera HOM05D003792 ORTHO05D003195 1.0e-17 94.4 177 37.3
Ciclev10002531m.g Citrus clementina HOM05D003792 ORTHO05D003195 1.3e-17 94.0 174 36.8
Lsat_1_v5_gn_4_125741 Lactuca sativa HOM05D003792 ORTHO05D003195 1.3e-17 94.0 188 35.6
Gohir.D01G108300 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.7e-17 93.6 156 39.7
TAR628G0921 Trochodendron aralioides HOM05D003792 ORTHO05D003195 2.2e-17 93.2 180 35.0
Potri.002G125900 Populus trichocarpa HOM05D003792 ORTHO05D003195 2.9e-17 92.8 190 35.8
Actinidia38059 Actinidia chinensis HOM05D004168 ORTHO05D004999 3.8e-17 92.4 197 35.0
ECA246G0047 Erigeron canadensis HOM05D003792 ORTHO05D003195 3.8e-17 92.4 185 36.8
Actinidia23277 Actinidia chinensis HOM05D003792 ORTHO05D003195 8.4e-17 91.3 196 36.2
CANSAT25G2784 Cannabis sativa HOM05D003792 ORTHO05D003195 1.1e-16 90.9 181 34.3
Gorai.002G132500 Gossypium raimondii HOM05D003792 ORTHO05D003195 1.1e-16 90.9 156 39.1
CiPaw.15G055900 Carya illinoinensis HOM05D003792 ORTHO05D003195 1.4e-16 90.5 191 36.1
CsaV3_4G034340 Cucumis sativus L. HOM05D003792 ORTHO05D003195 1.9e-16 90.1 183 35.0
PGR031G0673 Punica granatum HOM05D003792 ORTHO05D003195 2.5e-16 89.7 186 36.0
vmacro21518 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 4.2e-16 89.0 185 34.1
AT5G42900 Arabidopsis thaliana HOM05D003792 ORTHO05D003195 5.5e-16 88.6 180 35.6
ECA232G3551 Erigeron canadensis HOM05D003792 ORTHO05D003195 5.5e-16 88.6 187 38.0
Eucgr.F00223 Eucalyptus grandis HOM05D003792 ORTHO05D003195 5.5e-16 88.6 190 36.8
Aa31LG9G12960 Aethionema arabicum HOM05D003792 ORTHO05D003195 7.1e-16 88.2 184 37.5
Gohir.A05G202700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 7.1e-16 88.2 180 40.0
CANSAT25G3506 Cannabis sativa HOM05D003792 ORTHO05D003195 9.3e-16 87.8 181 33.7
PGSC0003DMG402007970 Solanum tuberosum HOM05D003792 ORTHO05D003195 9.3e-16 87.8 166 34.3
MELO3C016754.2 Cucumis melo HOM05D003792 ORTHO05D003195 2.1e-15 86.7 174 35.1
Dinv15716 Davidia involucrata HOM05D003792 ORTHO05D003195 3.5e-15 85.9 182 37.9
Nitab4.5_0000287g0270 Nicotiana tabacum HOM05D003792 ORTHO05D003195 3.5e-15 85.9 166 33.7
Peaxi162Scf00252g00410 Petunia axillaris HOM05D003792 ORTHO05D003195 3.5e-15 85.9 187 32.1
BcaB07g31033 Brassica carinata HOM05D003792 ORTHO05D003195 4.6e-15 85.5 171 35.7
ClCG05G019900 Citrullus lanatus HOM05D004168 ORTHO05D004999 4.6e-15 85.5 185 34.1
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 4.6e-15 85.5 181 37.0
Sp2g07640 Schrenkiella parvula HOM05D003792 ORTHO05D003195 4.6e-15 85.5 192 34.4
SpUn0117_0010 Schrenkiella parvula HOM05D003792 ORTHO05D003195 4.6e-15 85.5 192 34.4
AL8G18050 Arabidopsis lyrata HOM05D003792 ORTHO05D003195 6.0e-15 85.1 181 33.7
Haze_17521 Corylus avellana HOM05D000207 ORTHO05D000606 6.0e-15 85.1 179 37.4
Cc10_g04110 Coffea canephora HOM05D003792 ORTHO05D003195 7.9e-15 84.7 170 34.1
HanXRQChr09g0267581 Helianthus annuus HOM05D003792 ORTHO05D003195 1.0e-14 84.3 174 35.6
Nitab4.5_0002760g0070 Nicotiana tabacum HOM05D003792 ORTHO05D003195 1.0e-14 84.3 166 33.7
BolC9t55450H Brassica oleracea HOM05D003792 ORTHO05D003195 1.8e-14 83.6 167 34.1
C04p25040 Brassica napus HOM05D003792 ORTHO05D003195 3.9e-14 82.4 175 37.1
BolC4t24005H Brassica oleracea HOM05D003792 ORTHO05D003195 3.9e-14 82.4 175 37.1
Thhalv10003264m.g Eutrema salsugineum HOM05D003792 ORTHO05D003195 3.9e-14 82.4 183 36.6
MBI03_g13463_MAGBIO Magnolia biondii HOM05D003792 ORTHO05D003195 3.9e-14 82.4 190 33.2
BcaC02g10794 Brassica carinata HOM05D003792 ORTHO05D003195 6.7e-14 81.6 171 36.8
QL11p035325 Quercus lobata HOM05D003792 ORTHO05D003195 8.7e-14 81.3 189 34.9
A06p48190 Brassica napus HOM05D003792 ORTHO05D003195 1.1e-13 80.9 175 38.3
BraA06t27688Z Brassica rapa HOM05D003792 ORTHO05D003195 1.1e-13 80.9 175 38.3
Os03g0184100 Oryza sativa ssp. japonica HOM05D003792 ORTHO05D003195 1.1e-13 80.9 174 33.9
SalBow7G2289 Salvia bowleyana HOM05D003792 ORTHO05D003195 1.1e-13 80.9 171 36.8
Sopen04g032480 Solanum pennellii HOM05D003792 ORTHO05D003195 1.1e-13 80.9 166 31.3
Carub.0008s0601 Capsella rubella HOM05D003792 ORTHO05D003195 1.5e-13 80.5 177 33.9
Aqoxy6G01313 Aquilegia oxysepala HOM05D003792 ORTHO05D003195 1.9e-13 80.1 203 32.5
Oeu012963.1 Olea europaea HOM05D003792 ORTHO05D003195 1.9e-13 80.1 187 36.4
Gohir.A01G120000 Gossypium hirsutum HOM05D003792 ORTHO05D003195 2.5e-13 79.7 172 34.3
Sed0003020 Sechium edule HOM05D003792 ORTHO05D003195 4.3e-13 79.0 175 31.4
Sc02g0007160 Simmondsia chinensis HOM05D003792 ORTHO05D003195 4.3e-13 79.0 169 33.1
Hund23000 Selenicereus undatus HOM05D003792 ORTHO05D003195 5.7e-13 78.6 113 38.9
Haze_10092 Corylus avellana HOM05D003792 ORTHO05D003195 9.7e-13 77.8 184 33.7
GSVIVG01031734001 Vitis vinifera HOM05D003792 ORTHO05D003195 1.3e-12 77.4 192 29.2
Sc15g0006120 Simmondsia chinensis HOM05D004168 ORTHO05D003195 1.6e-12 77.0 171 35.7
THA.LOC104812575 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 2.2e-12 76.6 209 32.5
CDE04G2954 Ceratophyllum demersum HOM05D000925 ORTHO05D002746 3.7e-12 75.9 180 31.1
Solyc04g078880.3 Solanum lycopersicum HOM05D003792 ORTHO05D003195 6.3e-12 75.1 168 30.4
THA.LOC104822850 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 1.4e-11 73.9 181 30.4
Sabra02G0098600 Salix brachista HOM05D000207 ORTHO05D003195 3.1e-11 72.8 234 28.6
Zm00001eb006310 Zea mays HOM05D003792 ORTHO05D003195 3.1e-11 72.8 176 31.8
MSTRG.25091 Avicennia marina HOM05D003792 ORTHO05D003195 5.3e-11 72.0 180 31.1
Lsat_1_v5_gn_6_111920 Lactuca sativa HOM05D003792 ORTHO05D003195 6.9e-11 71.6 183 32.8
EL10As7g23733 Beta vulgaris HOM05D003792 ORTHO05D003195 1.2e-10 70.9 107 36.4
HanXRQChr05g0150801 Helianthus annuus HOM05D003792 ORTHO05D003195 2.0e-10 70.1 114 39.5
A09p20080 Brassica napus HOM05D003792 ORTHO05D003195 2.6e-10 69.7 168 32.7
BraA09t37621Z Brassica rapa HOM05D003792 ORTHO05D003195 2.6e-10 69.7 168 32.7
Nn1g04847 Nelumbo nucifera HOM05D003792 ORTHO05D003195 2.6e-10 69.7 203 32.5
Actinidia00436 Actinidia chinensis HOM05D003792 ORTHO05D003195 5.9e-10 68.6 191 31.9
Actinidia29872 Actinidia chinensis HOM05D004168 ORTHO05D004999 1.0e-09 67.8 198 32.3
Thecc.02G101400 Theobroma cacao HOM05D003792 ORTHO05D003195 1.0e-09 67.8 190 28.9
PGR083G2840 Punica granatum HOM05D003792 ORTHO05D003195 1.7e-09 67.0 177 37.3
HanXRQChr14g0439641 Helianthus annuus HOM05D003792 ORTHO05D003195 2.9e-09 66.2 165 31.5
SGA_v2.0_scaffold28G11774 Striga asiatica HOM05D000207 ORTHO05D000606 6.5e-09 65.1 182 30.8
Oeu049982.1 Olea europaea HOM05D003792 ORTHO05D003195 8.5e-09 64.7 158 30.4
Ah.11g043080 Amaranthus hybridus HOM05D003792 ORTHO05D003195 1.1e-08 64.3 103 39.8
BcaC06g31740 Brassica carinata HOM05D003792 ORTHO05D003195 1.1e-08 64.3 157 35.7
Manes.10G080100 Manihot esculenta HOM05D003792 ORTHO05D003195 1.1e-08 64.3 131 38.9
CDE08G1351 Ceratophyllum demersum HOM05D003792 ORTHO05D003195 1.4e-08 63.9 98 38.8
arahy.Tifrunner.gnm1.ann1.V9AGNQ Arachis hypogaea HOM05D004168 ORTHO05D003195 1.9e-08 63.5 105 37.1
CiPaw.05G007500 Carya illinoinensis HOM05D003792 ORTHO05D003195 3.2e-08 62.8 114 35.1
Migut.C00575 Erythranthe guttata HOM05D003792 ORTHO05D003195 4.2e-08 62.4 180 31.1
Gohir.D12G024500 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.2e-07 60.8 187 29.4
MD05G1081700 Malus domestica HOM05D003792 ORTHO05D003195 1.6e-07 60.5 181 33.1
C09p25480 Brassica napus HOM05D003792 ORTHO05D003195 3.6e-07 59.3 167 29.9
SEGI_08793 Sequoiadendron giganteum HOM05D019663 ORTHO05D003195 3.6e-07 59.3 106 34.9
BcaC04g21959 Brassica carinata HOM05D003792 ORTHO05D003195 4.6e-07 58.9 167 29.9
CARHR242110 Cardamine hirsuta HOM05D009953 ORTHO05D003195 7.9e-07 58.2 69 42.0
Gorai.008G024800 Gossypium raimondii HOM05D003792 ORTHO05D003195 1.0e-06 57.8 188 28.7
Cpa.g.sc62.6 Carica papaya HOM05D003792 ORTHO05D003195 1.8e-06 57.0 159 30.8
AT4G33980 Arabidopsis thaliana HOM05D009953 ORTHO05D003195 2.3e-06 56.6 67 43.3
arahy.Tifrunner.gnm1.ann1.TVNS6S Arachis hypogaea HOM05D004168 ORTHO05D004999 2.3e-06 56.6 150 27.3
CSS0036112 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 2.3e-06 56.6 195 29.7
PGR042G0828 Punica granatum HOM05D003792 ORTHO05D003195 2.3e-06 56.6 185 29.2
AL7G17410 Arabidopsis lyrata HOM05D009953 ORTHO05D003195 3.0e-06 56.2 69 40.6
CDE10G0229 Ceratophyllum demersum HOM05D000955 ORTHO05D003340 3.9e-06 55.8 176 30.7
Aa31LG2G16400 Aethionema arabicum HOM05D009953 ORTHO05D003195 5.1e-06 55.5 174 28.7
CARHR181240 Cardamine hirsuta HOM05D003792 ORTHO05D003195 5.1e-06 55.5 178 29.8
CSS0015140 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 6.7e-06 55.1 187 30.5
THA.LOC104814167 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 6.7e-06 55.1 179 29.6


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