Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37258 Trifolium pratense HOM05D006064 ORTHO05D007619 3.5e-83 311.6 162 100.0
Medtr2g101770 Medicago truncatula HOM05D006064 ORTHO05D007619 4.2e-52 208.4 151 76.2
Ca_01132_v3 Cicer arietinum L. HOM05D006064 ORTHO05D007619 1.8e-50 203.0 164 69.5
Lalb_Chr22g0351371 Lupinus albus HOM05D006064 ORTHO05D007619 2.2e-40 169.5 150 64.0
Potri.001G184000 Populus trichocarpa HOM05D006064 ORTHO05D007619 4.5e-38 161.8 144 63.2
Manes.04G130000 Manihot esculenta HOM05D006064 ORTHO05D007619 7.7e-38 161.0 144 60.4
Prupe.3G067300 Prunus persica HOM05D006064 ORTHO05D007619 1.7e-37 159.8 148 60.1
arahy.Tifrunner.gnm1.ann1.MEX591 Arachis hypogaea HOM05D006064 ORTHO05D007619 2.2e-37 159.5 152 59.2
CiPaw.02G148800 Carya illinoinensis HOM05D006064 ORTHO05D007619 5.0e-37 158.3 153 60.1
Haze_16361 Corylus avellana HOM05D006064 ORTHO05D007619 5.0e-37 158.3 153 60.1
Gorai.011G074400 Gossypium raimondii HOM05D006064 ORTHO05D007619 8.5e-37 157.5 141 61.7
MELO3C024255.2 Cucumis melo HOM05D006064 ORTHO05D007619 1.9e-36 156.4 157 57.3
CsaV3_7G033420 Cucumis sativus L. HOM05D006064 ORTHO05D007619 1.9e-36 156.4 159 57.9
Gohir.D10G070100 Gossypium hirsutum HOM05D006064 ORTHO05D007619 1.9e-36 156.4 141 61.7
QL05p021654 Quercus lobata HOM05D006064 ORTHO05D007619 1.9e-36 156.4 155 59.4
Cfa002095 Carpinus fangiana HOM05D006064 ORTHO05D007619 4.2e-36 155.2 153 59.5
CANSAT56G1509 Cannabis sativa HOM05D006064 ORTHO05D007619 5.5e-36 154.8 158 56.3
PGR102G3343 Punica granatum HOM05D006064 ORTHO05D007619 7.2e-36 154.5 152 59.9
Gohir.A05G131800 Gossypium hirsutum HOM05D006064 ORTHO05D007619 1.2e-35 153.7 153 58.8
Lj3g0008796 Lotus japonicus HOM05D006064 ORTHO05D007619 1.2e-35 153.7 148 58.1
Sabra01G0155400 Salix brachista HOM05D006064 ORTHO05D007619 1.2e-35 153.7 140 63.6
GSVIVG01017072001 Vitis vinifera HOM05D006064 ORTHO05D007619 1.6e-35 153.3 141 61.0
Phvul.005G168800 Phaseolus vulgaris HOM05D006064 ORTHO05D007619 2.1e-35 152.9 151 57.0
ClCG09G001940 Citrullus lanatus HOM05D006064 ORTHO05D007619 2.7e-35 152.5 159 56.0
Thecc.06G092400 Theobroma cacao HOM05D006064 ORTHO05D007619 3.6e-35 152.1 144 58.3
Gohir.D05G131300 Gossypium hirsutum HOM05D006064 ORTHO05D007619 4.7e-35 151.8 152 58.6
Gorai.009G135000 Gossypium raimondii HOM05D006064 ORTHO05D007619 4.7e-35 151.8 152 58.6
Duzib160G0510 Durio zibethinus HOM05D006064 ORTHO05D007619 6.1e-35 151.4 144 58.3
Duzib235G0379 Durio zibethinus HOM05D006064 ORTHO05D007619 7.9e-35 151.0 144 59.0
TAR626G0023 Trochodendron aralioides HOM05D006064 ORTHO05D007619 7.9e-35 151.0 152 59.9
Ah.01g021630 Amaranthus hybridus HOM05D006064 ORTHO05D007619 1.0e-34 150.6 148 55.4
Ciclev10026679m.g Citrus clementina HOM05D006064 ORTHO05D007619 1.0e-34 150.6 146 58.9
PGSC0003DMG400002547 Solanum tuberosum HOM05D006064 ORTHO05D007619 1.4e-34 150.2 141 58.9
RcHm_v2.0_Chr2g0138941 Rosa chinensis HOM05D006064 ORTHO05D007619 1.8e-34 149.8 144 56.2
Aa31LG4G130 Aethionema arabicum HOM05D006064 ORTHO05D007619 3.9e-34 148.7 141 58.9
Solyc03g120630.4 Solanum lycopersicum HOM05D006064 ORTHO05D007619 3.9e-34 148.7 146 56.2
Aqoxy7G01608 Aquilegia oxysepala HOM05D006064 ORTHO05D007619 6.7e-34 147.9 154 55.2
VMungo1080G0744 Vigna mungo HOM05D006064 ORTHO05D007619 1.1e-33 147.1 126 61.9
Dinv38021 Davidia involucrata HOM05D006064 ORTHO05D007619 4.4e-33 145.2 142 59.9
FAN09G1878 Fragaria x ananassa HOM05D006064 ORTHO05D007619 5.7e-33 144.8 144 56.9
TAR383G1034 Trochodendron aralioides HOM05D006064 ORTHO05D007619 5.7e-33 144.8 153 57.5
Eucgr.F03039 Eucalyptus grandis HOM05D006064 ORTHO05D007619 7.4e-33 144.4 142 55.6
Carub.0002s2765 Capsella rubella HOM05D006064 ORTHO05D007619 9.7e-33 144.1 140 60.7
Sed0002776 Sechium edule HOM05D006064 ORTHO05D007619 9.7e-33 144.1 157 53.5
SGA_v2.0_scaffold69G23360 Striga asiatica HOM05D006064 ORTHO05D007619 9.7e-33 144.1 142 57.0
FvH4_6g31770 Fragaria vesca HOM05D006064 ORTHO05D007619 1.3e-32 143.7 144 56.2
Lsat_1_v5_gn_5_130940 Lactuca sativa HOM05D006064 ORTHO05D007619 2.2e-32 142.9 157 52.9
FAN02G0676 Fragaria x ananassa HOM05D006064 ORTHO05D007619 3.7e-32 142.1 146 56.2
Hma1.2p1_1195F.1_g265790 Hydrangea macrophylla HOM05D006064 ORTHO05D007619 3.7e-32 142.1 141 57.4
Hma1.2p1_3147F.1_g333156 Hydrangea macrophylla HOM05D006064 ORTHO05D007619 3.7e-32 142.1 141 57.4
FAN14G0180 Fragaria x ananassa HOM05D006064 ORTHO05D007619 6.3e-32 141.4 144 56.9
Glyma.15G016400 Glycine max HOM05D006064 ORTHO05D007619 6.3e-32 141.4 155 56.1
THA.LOC104800422 Tarenaya hassleriana HOM05D006064 ORTHO05D007619 6.3e-32 141.4 142 57.0
Thhalv10019289m.g Eutrema salsugineum HOM05D006064 ORTHO05D007619 8.2e-32 141.0 141 58.2
PSO566G0311 Papaver somniferum HOM05D006064 ORTHO05D007619 8.2e-32 141.0 145 56.6
Cpa.g.sc98.5 Carica papaya HOM05D006064 ORTHO05D007619 1.1e-31 140.6 128 60.2
PSO782G0135 Papaver somniferum HOM05D006064 ORTHO05D007619 1.1e-31 140.6 145 56.6
CSS0016455 Camellia sinensis var. sinensis HOM05D006064 ORTHO05D007619 1.4e-31 140.2 154 54.5
AL2G41710 Arabidopsis lyrata HOM05D006064 ORTHO05D007619 2.4e-31 139.4 140 57.1
BcaB07g30746 Brassica carinata HOM05D006064 ORTHO05D007619 2.4e-31 139.4 146 54.8
Cc04_g03040 Coffea canephora HOM05D006064 ORTHO05D007619 2.4e-31 139.4 158 55.1
TWI12G0791 Tripterygium wilfordii HOM05D006064 ORTHO05D007619 2.4e-31 139.4 148 54.7
BolC9t55875H Brassica oleracea HOM05D006064 ORTHO05D007619 4.1e-31 138.7 139 56.8
CDE04G2099 Ceratophyllum demersum HOM05D006064 ORTHO05D007619 5.3e-31 138.3 150 54.0
Glyma.13G357200 Glycine max HOM05D006064 ORTHO05D007619 5.3e-31 138.3 153 56.2
Ah.01g005550 Amaranthus hybridus HOM05D006064 ORTHO05D007619 9.1e-31 137.5 147 57.8
CSS0001890 Camellia sinensis var. sinensis HOM05D006064 ORTHO05D007619 9.1e-31 137.5 154 53.9
A09p23360 Brassica napus HOM05D006064 ORTHO05D007619 1.2e-30 137.1 147 55.1
BraA09t37937Z Brassica rapa HOM05D006064 ORTHO05D007619 1.2e-30 137.1 147 55.1
Oeu033507.1 Olea europaea HOM05D006064 ORTHO05D007619 1.2e-30 137.1 152 55.9
BcaC04g21589 Brassica carinata HOM05D006064 ORTHO05D007619 1.6e-30 136.7 139 56.1
FAN05G4262 Fragaria x ananassa HOM05D006064 ORTHO05D007619 1.6e-30 136.7 144 54.2
MD17G1191100 Malus domestica HOM05D006064 ORTHO05D007619 1.6e-30 136.7 149 56.4
AT1G79850 Arabidopsis thaliana HOM05D006064 ORTHO05D007619 2.0e-30 136.3 141 57.4
CARHR074660 Cardamine hirsuta HOM05D006064 ORTHO05D007619 4.5e-30 135.2 140 56.4
SGA_v2.0_scaffold5G02555 Striga asiatica HOM05D006064 ORTHO05D007619 4.5e-30 135.2 121 60.3
A09p23350 Brassica napus HOM05D006064 ORTHO05D007619 5.9e-30 134.8 139 56.1
C09p30100 Brassica napus HOM05D006064 ORTHO05D007619 5.9e-30 134.8 138 55.8
C09p30110 Brassica napus HOM05D006064 ORTHO05D007619 5.9e-30 134.8 139 55.4
BraA09t37936Z Brassica rapa HOM05D006064 ORTHO05D007619 5.9e-30 134.8 139 56.1
TWI75G0440 Tripterygium wilfordii HOM05D006064 ORTHO05D007619 5.9e-30 134.8 151 53.6
Thhalv10001197m.g Eutrema salsugineum HOM05D006064 ORTHO05D007619 1.7e-29 133.3 141 53.9
CAN.G438.28 Capsicum annuum HOM05D006064 ORTHO05D007619 2.2e-29 132.9 156 50.6
HanXRQChr12g0360791 Helianthus annuus HOM05D006064 ORTHO05D007619 2.2e-29 132.9 144 52.1
BcaC04g21590 Brassica carinata HOM05D006064 ORTHO05D007619 2.9e-29 132.5 138 55.1
BolC9t55874H Brassica oleracea HOM05D006064 ORTHO05D007619 2.9e-29 132.5 138 55.1
EL10Ac9g22030 Beta vulgaris HOM05D006064 ORTHO05D007619 5.0e-29 131.7 104 68.3
AUR62011660 Chenopodium quinoa HOM05D006064 ORTHO05D007619 8.5e-29 131.0 152 53.9
MBI09_g14014_MAGBIO Magnolia biondii HOM05D006064 ORTHO05D007619 8.5e-29 131.0 141 56.7
DCAR_016211 Daucus carota HOM05D006064 ORTHO05D007619 1.1e-28 130.6 101 66.3
AUR62016483 Chenopodium quinoa HOM05D006064 ORTHO05D007619 1.5e-28 130.2 156 52.6
Migut.I00941 Erythranthe guttata HOM05D006064 ORTHO05D007619 3.2e-28 129.0 153 52.9
Lj5C58T14 Lonicera japonica HOM05D006064 ORTHO05D007619 3.2e-28 129.0 103 63.1
Sp2g12850 Schrenkiella parvula HOM05D006064 ORTHO05D007619 4.2e-28 128.6 152 50.7
Gohir.A10G081300 Gossypium hirsutum HOM05D006064 ORTHO05D007619 5.5e-28 128.3 104 61.5
Actinidia21680 Actinidia chinensis HOM05D006064 ORTHO05D007619 7.2e-28 127.9 145 55.2
Sc12g0009460 Simmondsia chinensis HOM05D006064 ORTHO05D007619 1.2e-27 127.1 146 54.8
MSTRG.11053 Avicennia marina HOM05D006064 ORTHO05D007619 3.0e-26 122.5 140 47.9
COL.COLO4_30435 Corchorus olitorius HOM05D006064 ORTHO05D007619 4.0e-26 122.1 104 59.6
SalBow2G0408 Salvia bowleyana HOM05D006064 ORTHO05D007619 4.0e-26 122.1 100 65.0
Nitab4.5_0007217g0010 Nicotiana tabacum HOM05D006064 ORTHO05D007619 5.2e-26 121.7 103 60.2
Rhsim08G0223400 Rhododendron simsii HOM05D006064 ORTHO05D007619 5.2e-26 121.7 104 61.5
Nitab4.5_0001315g0190 Nicotiana tabacum HOM05D006064 ORTHO05D007619 4.4e-25 118.6 100 61.0
ATR0693G299 Amborella trichopoda HOM05D006064 ORTHO05D007619 9.7e-25 117.5 139 52.5
unitig_46.g18557 Utricularia gibba HOM05D006064 ORTHO05D007619 1.7e-24 116.7 151 49.7
Nn2g11694 Nelumbo nucifera HOM05D006064 ORTHO05D007619 3.7e-24 115.5 100 59.0
SEGI_37104 Sequoiadendron giganteum HOM05D006064 ORTHO05D007619 3.7e-24 115.5 123 52.8
CSS0048088 Camellia sinensis var. sinensis HOM05D006064 ORTHO05D007619 6.3e-24 114.8 101 60.4
unitig_37.g12253 Utricularia gibba HOM05D000346 ORTHO05D000326 1.4e-23 113.6 148 48.6
vmacro18887 Vaccinium macrocarpon HOM05D006064 ORTHO05D007619 1.2e-22 110.5 98 59.2
Os04g0691600 Oryza sativa ssp. japonica HOM05D006064 ORTHO05D007619 4.2e-20 102.1 146 45.9
Zm00001eb367450 Zea mays HOM05D006064 ORTHO05D007619 4.2e-20 102.1 143 45.5
CSS0034695 Camellia sinensis var. sinensis HOM05D006064 ORTHO05D007619 1.6e-19 100.1 101 55.4
AagrBONN_evm.TU.Sc2ySwM_344.4090 Anthoceros agrestis HOM05D006064 ORTHO05D007619 2.7e-19 99.4 102 53.9
AagrBONN_evm.TU.Sc2ySwM_344.4095 Anthoceros agrestis HOM05D006064 ORTHO05D007619 1.8e-18 96.7 137 43.8
Pp3c11_14630 Physcomitrium patens HOM05D006064 ORTHO05D007619 2.3e-18 96.3 75 61.3
Nn3g18074 Nelumbo nucifera HOM05D006064 ORTHO05D007619 4.0e-18 95.5 107 51.4
Pp3c1_12860 Physcomitrium patens HOM05D006064 ORTHO05D007619 7.5e-17 91.3 150 40.0
Zm00001eb434460 Zea mays HOM05D006064 ORTHO05D007619 7.5e-17 91.3 138 43.5
MD09G1209400 Malus domestica HOM05D006064 ORTHO05D007619 9.8e-17 90.9 96 54.2
CBR_g33913 Chara braunii HOM05D006064 ORTHO05D007619 7.0e-15 84.7 81 49.4
Mapoly0027s0119 Marchantia polymorpha HOM05D006064 ORTHO05D007619 5.9e-14 81.6 100 47.0
SMO358G0237 Selaginella moellendorffii HOM05D006064 ORTHO05D007619 1.7e-13 80.1 73 56.2
Actinidia32730 Actinidia chinensis HOM05D006064 ORTHO05D007619 1.1e-12 77.4 102 47.1
Peaxi162Scf00015g00005 Petunia axillaris HOM05D006064 ORTHO05D007619 5.5e-12 75.1 64 60.9
SalBow1G4549 Salvia bowleyana HOM05D006064 ORTHO05D007619 4.4e-09 65.5 76 48.7
Actinidia13476 Actinidia chinensis HOM05D006064 ORTHO05D007619 6.3e-08 61.6 130 34.6
Actinidia35657 Actinidia chinensis HOM05D006064 ORTHO05D007619 3.5e-06 55.8 101 34.7
AagrBONN_evm.TU.Sc2ySwM_362.494 Anthoceros agrestis HOM05D004588 ORTHO05D005365 3.5e-06 55.8 79 39.2


User provided reference genes

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