Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36985 Trifolium pratense HOM05D001325 ORTHO05D001540 9.9e-80 300.1 152 100.0
Hund27587 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.3e-14 82.0 62 72.6
Hund27666 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.3e-14 82.0 62 72.6
Hund27817 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.3e-14 82.0 62 72.6
Hund28083 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.3e-14 82.0 62 72.6
Hund28867 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.3e-14 82.0 62 72.6
Hund28882 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.3e-14 82.0 62 72.6
Hund29085 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.3e-14 82.0 62 72.6
Hund29471 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.3e-14 82.0 62 72.6
Hund29893 Selenicereus undatus HOM05D001325 ORTHO05D001540 4.3e-14 82.0 62 72.6
Sc03g0005010 Simmondsia chinensis HOM05D001325 ORTHO05D001540 4.3e-14 82.0 62 72.6
Sc04g0005520 Simmondsia chinensis HOM05D001325 ORTHO05D001540 4.3e-14 82.0 62 72.6
arahy.Tifrunner.gnm1.ann1.KX3NGM Arachis hypogaea HOM05D001325 ORTHO05D001540 2.8e-13 79.3 46 87.0
arahy.Tifrunner.gnm1.ann1.2YD7KU Arachis hypogaea HOM05D001325 ORTHO05D001540 6.1e-13 78.2 62 71.0
arahy.Tifrunner.gnm1.ann1.6A3TYM Arachis hypogaea HOM05D007194 ORTHO05D009182 6.1e-13 78.2 62 71.0
arahy.Tifrunner.gnm1.ann1.TPY4ZQ Arachis hypogaea HOM05D001325 ORTHO05D001540 6.1e-13 78.2 62 71.0
arahy.Tifrunner.gnm1.ann1.UX1VFS Arachis hypogaea HOM05D007194 ORTHO05D009182 6.1e-13 78.2 62 71.0
arahy.Tifrunner.gnm1.ann1.XXM48B Arachis hypogaea HOM05D001325 ORTHO05D001540 6.1e-13 78.2 62 71.0
LjContig00315g0013534 Lotus japonicus HOM05D001325 ORTHO05D001540 6.1e-13 78.2 62 71.0
Aqoxy12s039 Aquilegia oxysepala HOM05D001325 ORTHO05D001540 1.0e-12 77.4 62 69.4
DCAR_016146 Daucus carota HOM05D001325 ORTHO05D001540 1.0e-12 77.4 62 69.4
DCAR_032436 Daucus carota HOM05D001325 ORTHO05D001540 1.0e-12 77.4 62 69.4
HanXRQChr00c0055g0571461 Helianthus annuus HOM05D001325 ORTHO05D001540 1.0e-12 77.4 46 84.8
HanXRQChr01g0017121 Helianthus annuus HOM05D001325 ORTHO05D001540 1.0e-12 77.4 46 84.8
HanXRQChr10g0305211 Helianthus annuus HOM05D001325 ORTHO05D001540 1.0e-12 77.4 46 84.8
HanXRQChr16g0504411 Helianthus annuus HOM05D001325 ORTHO05D001540 1.0e-12 77.4 46 84.8
HanXRQMTg0579641 Helianthus annuus HOM05D001325 ORTHO05D001540 1.0e-12 77.4 46 84.8
Lsat_1_v5_gn_1_24001 Lactuca sativa HOM05D001325 ORTHO05D001540 1.0e-12 77.4 46 84.8
MBI05_g05342_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 1.0e-12 77.4 46 84.8
MBI06_g25391_MAGBIO Magnolia biondii HOM05D001750 ORTHO05D001825 1.0e-12 77.4 46 84.8
COL.COLO4_04481 Corchorus olitorius HOM05D001325 ORTHO05D001540 1.8e-12 76.6 62 69.4
arahy.Tifrunner.gnm1.ann1.ALHF99 Arachis hypogaea HOM05D001325 ORTHO05D001540 2.3e-12 76.3 46 84.8
Lalb_Chr17g0337391 Lupinus albus HOM05D001325 ORTHO05D001540 4.0e-12 75.5 62 67.7
Medtr0082s0040 Medicago truncatula HOM05D001325 ORTHO05D001540 5.2e-12 75.1 46 82.6
VMungo1309G2626 Vigna mungo HOM05D001325 ORTHO05D001540 8.9e-12 74.3 72 59.7
Sopen00g002640 Solanum pennellii HOM05D001325 ORTHO05D001540 1.2e-11 73.9 62 67.7
HanXRQChr10g0297181 Helianthus annuus HOM05D001325 ORTHO05D001540 1.5e-11 73.6 45 82.2
MBI10_g41321_MAGBIO Magnolia biondii HOM05D001325 ORTHO05D001540 2.0e-11 73.2 48 81.2
Nitab4.5_0001796g0270 Nicotiana tabacum HOM05D001325 ORTHO05D001540 2.0e-11 73.2 94 50.0
MSTRG.3525 Avicennia marina HOM05D001325 ORTHO05D001540 2.6e-11 72.8 46 78.3
PGR028G0006 Punica granatum HOM05D001325 ORTHO05D001540 2.6e-11 72.8 62 67.7
SHI36581 Sapria himalayana HOM05D001325 ORTHO05D001540 2.6e-11 72.8 46 80.4
SHI36771 Sapria himalayana HOM05D001325 ORTHO05D001540 2.6e-11 72.8 46 80.4
SHI36782 Sapria himalayana HOM05D001325 ORTHO05D001540 2.6e-11 72.8 46 80.4
SHI38210 Sapria himalayana HOM05D001325 ORTHO05D001540 2.6e-11 72.8 46 80.4
SHI39812 Sapria himalayana HOM05D001325 ORTHO05D001540 2.6e-11 72.8 46 80.4
SHI51612 Sapria himalayana HOM05D001325 ORTHO05D001540 2.6e-11 72.8 46 80.4
unitig_87.g28032 Utricularia gibba HOM05D001325 ORTHO05D001540 2.6e-11 72.8 46 78.3
Aa31csc464G70 Aethionema arabicum HOM05D001325 ORTHO05D001540 3.4e-11 72.4 46 80.4
CAN.G889.5 Capsicum annuum HOM05D001325 ORTHO05D001540 3.4e-11 72.4 62 66.1
Peaxi162Scf00588g00111 Petunia axillaris HOM05D001325 ORTHO05D005438 3.4e-11 72.4 46 80.4
SHI39476 Sapria himalayana HOM05D001325 ORTHO05D001540 3.4e-11 72.4 45 82.2
SHI49107 Sapria himalayana HOM05D001325 ORTHO05D001540 3.4e-11 72.4 46 80.4
Oeu040255.1 Olea europaea HOM05D001325 ORTHO05D001540 4.4e-11 72.0 46 76.1
Lsat_1_v5_gn_5_16521 Lactuca sativa HOM05D001325 ORTHO05D001540 5.7e-11 71.6 80 53.8
Nitab4.5_0002716g0110 Nicotiana tabacum HOM05D001325 ORTHO05D001540 5.7e-11 71.6 46 80.4
RcHm_v2.0_MTg0498391 Rosa chinensis HOM05D001325 ORTHO05D001540 5.7e-11 71.6 62 66.1
Sed0022288 Sechium edule HOM05D001325 ORTHO05D001540 5.7e-11 71.6 62 66.1
Sed0024579 Sechium edule HOM05D001325 ORTHO05D001540 5.7e-11 71.6 62 66.1
SGA_v2.0_scaffold255G45513 Striga asiatica HOM05D001325 ORTHO05D001540 5.7e-11 71.6 46 76.1
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 7.5e-11 71.2 62 66.1
SHI36629 Sapria himalayana HOM05D001325 ORTHO05D001540 7.5e-11 71.2 77 54.5
SHI39777 Sapria himalayana HOM05D001325 ORTHO05D001540 7.5e-11 71.2 46 78.3
SHI42173 Sapria himalayana HOM05D001325 ORTHO05D001540 7.5e-11 71.2 102 47.1
SHI43533 Sapria himalayana HOM05D001325 ORTHO05D001540 7.5e-11 71.2 46 80.4
SHI43970 Sapria himalayana HOM05D001325 ORTHO05D001540 7.5e-11 71.2 46 76.1
SHI54388 Sapria himalayana HOM05D001325 ORTHO05D001540 7.5e-11 71.2 46 78.3
SHI49994 Sapria himalayana HOM05D001325 ORTHO05D001540 9.8e-11 70.9 77 54.5
SHI50801 Sapria himalayana HOM05D001325 ORTHO05D001540 9.8e-11 70.9 77 54.5
SHI51700 Sapria himalayana HOM05D001325 ORTHO05D001540 9.8e-11 70.9 77 54.5
SHI53190 Sapria himalayana HOM05D001325 ORTHO05D001540 9.8e-11 70.9 77 54.5
SHI53369 Sapria himalayana HOM05D001325 ORTHO05D001540 9.8e-11 70.9 77 54.5
SHI53372 Sapria himalayana HOM05D001325 ORTHO05D001540 9.8e-11 70.9 77 54.5
SHI53577 Sapria himalayana HOM05D001325 ORTHO05D001540 9.8e-11 70.9 77 54.5
PGSC0003DMG400021744 Solanum tuberosum HOM05D001325 ORTHO05D001540 9.8e-11 70.9 62 66.1
SHI36383 Sapria himalayana HOM05D001325 ORTHO05D001540 1.3e-10 70.5 77 54.5
SHI36935 Sapria himalayana HOM05D001325 ORTHO05D001540 1.3e-10 70.5 77 54.5
AL3G44440 Arabidopsis lyrata HOM05D001325 ORTHO05D001540 1.7e-10 70.1 46 78.3
AT2G07675 Arabidopsis thaliana HOM05D001325 ORTHO05D001540 1.7e-10 70.1 46 78.3
ATMG00980 Arabidopsis thaliana HOM05D001325 ORTHO05D001540 1.7e-10 70.1 46 78.3
BNapus_Darmor_BZH_scaffold_234p00060 Brassica napus HOM05D001325 ORTHO05D001540 1.7e-10 70.1 46 78.3
BolSC28t60355H Brassica oleracea HOM05D001325 ORTHO05D001540 1.7e-10 70.1 46 78.3
BraSC48t46256Z Brassica rapa HOM05D001325 ORTHO05D001540 1.7e-10 70.1 46 78.3
BraSC77t46665Z Brassica rapa HOM05D001325 ORTHO05D001540 1.7e-10 70.1 46 78.3
CDE02G2710 Ceratophyllum demersum HOM05D001325 ORTHO05D001540 1.7e-10 70.1 46 76.1
CARHR283240 Cardamine hirsuta HOM05D001325 ORTHO05D001540 2.2e-10 69.7 46 76.1
CARHR287250 Cardamine hirsuta HOM05D001325 ORTHO05D001540 2.2e-10 69.7 46 76.1
SHI49663 Sapria himalayana HOM05D001325 ORTHO05D001540 2.2e-10 69.7 77 54.5
SHI49794 Sapria himalayana HOM05D001325 ORTHO05D001540 2.9e-10 69.3 62 61.3
SHI36142 Sapria himalayana HOM05D001325 ORTHO05D001540 3.7e-10 68.9 76 53.9
SalBow1G5748 Salvia bowleyana HOM05D001325 ORTHO05D001540 4.9e-10 68.6 46 73.9
SHI54160 Sapria himalayana HOM05D001325 ORTHO05D001540 4.9e-10 68.6 77 53.2
Nitab4.5_0001788g0300 Nicotiana tabacum HOM05D001325 ORTHO05D001540 6.4e-10 68.2 91 49.5
PGR031G1129 Punica granatum HOM05D001325 ORTHO05D001540 8.3e-10 67.8 62 61.3
SHI33930 Sapria himalayana HOM05D001325 ORTHO05D001540 1.1e-09 67.4 77 53.2
SHI35326 Sapria himalayana HOM05D001325 ORTHO05D001540 1.1e-09 67.4 77 53.2
SHI44670 Sapria himalayana HOM05D001325 ORTHO05D001540 1.1e-09 67.4 77 53.2
SHI46908 Sapria himalayana HOM05D001325 ORTHO05D001540 1.1e-09 67.4 77 53.2
SHI48150 Sapria himalayana HOM05D001325 ORTHO05D001540 1.1e-09 67.4 77 51.9
SHI51228 Sapria himalayana HOM05D001325 ORTHO05D001540 1.1e-09 67.4 77 53.2
SHI27347 Sapria himalayana HOM05D001325 ORTHO05D001540 2.4e-09 66.2 61 60.7
PSO170G5129 Papaver somniferum HOM05D001325 ORTHO05D001540 3.2e-09 65.9 64 59.4
PSO357G0201 Papaver somniferum HOM05D001325 ORTHO05D001540 3.2e-09 65.9 64 59.4
FvH4_5g00530 Fragaria vesca HOM05D001325 ORTHO05D001540 4.1e-09 65.5 62 59.7
FvH4_7g21740 Fragaria vesca HOM05D001325 ORTHO05D001540 4.1e-09 65.5 62 59.7
FAN03G1410 Fragaria x ananassa HOM05D001325 ORTHO05D001540 4.1e-09 65.5 62 59.7
FAN06G1419 Fragaria x ananassa HOM05D001325 ORTHO05D001540 4.1e-09 65.5 62 59.7
FAN06G2328 Fragaria x ananassa HOM05D001325 ORTHO05D001540 4.1e-09 65.5 62 59.7
FAN08G2386 Fragaria x ananassa HOM05D001325 ORTHO05D001540 4.1e-09 65.5 62 59.7
FAN10G4039 Fragaria x ananassa HOM05D001325 ORTHO05D001540 4.1e-09 65.5 62 59.7
FAN18G4430 Fragaria x ananassa HOM05D001325 ORTHO05D001540 4.1e-09 65.5 62 59.7
RcHm_v2.0_Chr5g0080691 Rosa chinensis HOM05D001325 ORTHO05D001540 4.1e-09 65.5 62 59.7
RcHm_v2.0_Chr7g0201871 Rosa chinensis HOM05D001325 ORTHO05D001540 4.1e-09 65.5 62 59.7
SHI38206 Sapria himalayana HOM05D001325 ORTHO05D001540 4.1e-09 65.5 79 51.9
SHI52150 Sapria himalayana HOM05D001325 ORTHO05D001540 4.1e-09 65.5 77 51.9
HanXRQChr08g0236211 Helianthus annuus HOM05D001325 ORTHO05D001540 7.0e-09 64.7 75 52.0
SHI35190 Sapria himalayana HOM05D001325 ORTHO05D001540 9.2e-09 64.3 48 70.8
SHI40461 Sapria himalayana HOM05D001325 ORTHO05D001540 9.2e-09 64.3 62 59.7
FAN13G1785 Fragaria x ananassa HOM05D001325 ORTHO05D001540 1.2e-08 63.9 62 58.1
SHI44576 Sapria himalayana HOM05D001325 ORTHO05D001540 1.2e-08 63.9 95 44.2
SHI51658 Sapria himalayana HOM05D001325 ORTHO05D001540 2.0e-08 63.2 77 51.9
SHI54219 Sapria himalayana HOM05D001325 ORTHO05D001540 2.0e-08 63.2 46 73.9
Medtr7g039790 Medicago truncatula HOM05D000319 ORTHO05D002646 3.5e-08 62.4 68 44.1
Medtr7g445240 Medicago truncatula HOM05D000319 ORTHO05D002646 3.5e-08 62.4 68 44.1
SHI35980 Sapria himalayana HOM05D001325 ORTHO05D001540 4.6e-08 62.0 77 50.6
SHI38315 Sapria himalayana HOM05D001325 ORTHO05D001540 4.6e-08 62.0 79 45.6
SHI35334 Sapria himalayana HOM05D001325 ORTHO05D001540 7.8e-08 61.2 46 71.7
SHI36567 Sapria himalayana HOM05D001325 ORTHO05D001540 1.0e-07 60.8 77 51.9
AagrBONN_evm.TU.Sc2ySwM_344.1250 Anthoceros agrestis HOM05D001325 ORTHO05D001540 1.7e-07 60.1 47 66.0
COL.COLO4_03981 Corchorus olitorius HOM05D001325 ORTHO05D001540 1.7e-07 60.1 32 90.6
Lalb_Chr03g0038861 Lupinus albus HOM05D001325 ORTHO05D001540 6.6e-07 58.2 31 87.1
SHI34630 Sapria himalayana HOM05D001325 ORTHO05D001540 2.5e-06 56.2 66 51.5


User provided reference genes

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