Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36866 Trifolium pratense HOM05D006460 ORTHO05D008143 3.4e-270 934.5 494 100.0
Psat6g046360 Pisum sativum HOM05D006460 ORTHO05D008143 4.6e-243 844.3 494 83.2
Medtr1g032120 Medicago truncatula HOM05D006460 ORTHO05D008143 2.3e-242 842.0 494 83.6
Ca_12543_v3 Cicer arietinum L. HOM05D006460 ORTHO05D008143 1.2e-238 829.7 491 82.5
VMungo1215G1636 Vigna mungo HOM05D006460 ORTHO05D008143 6.9e-223 777.3 493 77.1
Lj2g0013221 Lotus japonicus HOM05D006460 ORTHO05D008143 2.6e-222 775.4 493 77.1
Glyma.07G170000 Glycine max HOM05D006460 ORTHO05D008143 5.8e-222 774.2 493 76.3
Phvul.003G019300 Phaseolus vulgaris HOM05D006460 ORTHO05D008143 1.0e-218 763.5 495 76.6
Lalb_Chr17g0338451 Lupinus albus HOM05D006460 ORTHO05D008143 7.9e-211 737.3 494 73.5
arahy.Tifrunner.gnm1.ann1.N25L3F Arachis hypogaea HOM05D006460 ORTHO05D008143 4.6e-203 711.4 520 67.5
arahy.Tifrunner.gnm1.ann1.R72PZK Arachis hypogaea HOM05D006460 ORTHO05D008143 3.0e-202 708.8 527 67.0
QL12p034319 Quercus lobata HOM05D006460 ORTHO05D008143 2.9e-173 612.5 502 60.4
Haze_05122 Corylus avellana HOM05D006460 ORTHO05D008143 4.7e-171 605.1 492 61.0
MD09G1293200 Malus domestica HOM05D006460 ORTHO05D008143 1.5e-169 600.1 498 58.2
CiPaw.04G089700 Carya illinoinensis HOM05D006460 ORTHO05D008143 3.4e-169 599.0 496 61.1
Prupe.3G004500 Prunus persica HOM05D006460 ORTHO05D008143 3.4e-169 599.0 501 59.1
Potri.002G189800 Populus trichocarpa HOM05D006460 ORTHO05D008143 2.2e-168 596.3 495 59.8
Atru.chr5.915 Acer truncatum HOM05D006460 ORTHO05D008143 1.1e-167 594.0 488 60.5
Ciclev10001046m.g Citrus clementina HOM05D006460 ORTHO05D008143 4.1e-167 592.0 493 61.1
Sabra02G0165800 Salix brachista HOM05D006460 ORTHO05D008143 5.9e-166 588.2 495 58.8
Duzib138G1376 Durio zibethinus HOM05D006460 ORTHO05D008143 2.1e-163 579.7 492 59.3
Gorai.001G146600 Gossypium raimondii HOM05D006460 ORTHO05D008143 1.5e-161 573.5 495 58.6
Gohir.D07G134900 Gossypium hirsutum HOM05D006460 ORTHO05D008143 3.4e-161 572.4 497 58.4
FvH4_1g26500 Fragaria vesca HOM05D006460 ORTHO05D008143 5.8e-161 571.6 503 55.7
Eucgr.H00886 Eucalyptus grandis HOM05D006460 ORTHO05D008143 7.5e-161 571.2 491 58.9
COL.COLO4_23162 Corchorus olitorius HOM05D006460 ORTHO05D008143 1.3e-160 570.5 491 58.7
GSVIVG01028196001 Vitis vinifera HOM05D006460 ORTHO05D008143 1.3e-160 570.5 493 57.6
FAN28G1427 Fragaria x ananassa HOM05D006460 ORTHO05D008143 2.9e-160 569.3 508 54.5
CANSAT56G1882 Cannabis sativa HOM05D006460 ORTHO05D008143 1.1e-159 567.4 501 57.7
TAR362G0080 Trochodendron aralioides HOM05D006460 ORTHO05D008143 1.1e-159 567.4 511 57.7
RcHm_v2.0_Chr3g0486571 Rosa chinensis HOM05D006460 ORTHO05D008143 2.3e-157 559.7 503 55.5
Sc17g0000180 Simmondsia chinensis HOM05D006460 ORTHO05D008143 3.3e-156 555.8 495 57.0
TWI14G0400 Tripterygium wilfordii HOM05D006460 ORTHO05D008143 8.0e-155 551.2 493 57.0
CSS0037090 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 2.0e-153 546.6 518 53.5
Sed0027463 Sechium edule HOM05D006460 ORTHO05D008143 7.5e-153 544.7 492 56.1
PGR083G0788 Punica granatum HOM05D006460 ORTHO05D008143 9.8e-153 544.3 494 56.3
Nn4g25417 Nelumbo nucifera HOM05D006460 ORTHO05D008143 2.9e-152 542.7 512 54.5
Manes.05G010900 Manihot esculenta HOM05D006460 ORTHO05D008143 9.2e-151 537.7 476 57.1
Cpa.g.sc543.2 Carica papaya HOM05D006460 ORTHO05D008143 1.6e-150 537.0 499 54.7
Thhalv10028644m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 2.7e-150 536.2 494 54.0
Thhalv10028645m.g Eutrema salsugineum HOM05D006460 ORTHO05D008143 2.7e-150 536.2 494 54.0
Actinidia21358 Actinidia chinensis HOM05D006460 ORTHO05D008143 3.5e-150 535.8 509 54.4
Thecc.01G322200 Theobroma cacao HOM05D006460 ORTHO05D008143 4.6e-150 535.4 495 56.8
vmacro02372 Vaccinium macrocarpon HOM05D006460 ORTHO05D008143 7.8e-150 534.6 552 51.1
Oeu002575.1 Olea europaea HOM05D006460 ORTHO05D008143 3.9e-149 532.3 498 54.6
Gohir.A07G130500 Gossypium hirsutum HOM05D006460 ORTHO05D008143 5.0e-149 531.9 495 56.0
Lj1C11T12 Lonicera japonica HOM05D006460 ORTHO05D008143 1.1e-148 530.8 508 53.5
PGSC0003DMG400005211 Solanum tuberosum HOM05D006460 ORTHO05D008143 3.3e-148 529.3 494 55.1
Solyc01g068050.3 Solanum lycopersicum HOM05D006460 ORTHO05D008143 4.3e-148 528.9 493 54.2
ClCG09G004700 Citrullus lanatus HOM05D006460 ORTHO05D008143 1.2e-147 527.3 501 53.5
Aqoxy5G02768 Aquilegia oxysepala HOM05D006460 ORTHO05D008143 3.6e-147 525.8 501 52.9
THA.LOC104801320 Tarenaya hassleriana HOM05D006460 ORTHO05D008143 8.1e-147 524.6 489 53.8
FAN26G0500 Fragaria x ananassa HOM05D006460 ORTHO05D008143 1.4e-146 523.9 508 51.8
BcaB01g02385 Brassica carinata HOM05D006460 ORTHO05D008143 6.8e-146 521.5 491 53.0
CAN.G100.27 Capsicum annuum HOM05D006460 ORTHO05D008143 1.5e-145 520.4 494 54.3
DCAR_012316 Daucus carota HOM05D006460 ORTHO05D008143 1.5e-145 520.4 501 52.3
FAN19G0891 Fragaria x ananassa HOM05D006460 ORTHO05D008143 1.5e-145 520.4 503 52.7
Sp6g01720 Schrenkiella parvula HOM05D006460 ORTHO05D008143 2.0e-145 520.0 493 52.7
Carub.0006s3536 Capsella rubella HOM05D006460 ORTHO05D008143 3.4e-145 519.2 493 53.3
Cc01_g21920 Coffea canephora HOM05D006460 ORTHO05D008143 1.3e-144 517.3 500 54.0
CARHR249840 Cardamine hirsuta HOM05D006460 ORTHO05D008143 2.9e-144 516.2 487 53.4
C03p38430 Brassica napus HOM05D006460 ORTHO05D008143 3.7e-144 515.8 495 53.7
A03p31440 Brassica napus HOM05D006460 ORTHO05D008143 4.9e-144 515.4 496 52.6
AUR62024570 Chenopodium quinoa HOM05D006460 ORTHO05D008143 6.4e-144 515.0 489 52.8
HanXRQChr13g0414441 Helianthus annuus HOM05D006460 ORTHO05D008143 6.4e-144 515.0 488 54.7
AT4G01880 Arabidopsis thaliana HOM05D006460 ORTHO05D008143 8.3e-144 514.6 493 53.8
Cfa004883 Carpinus fangiana HOM05D006460 ORTHO05D008143 8.3e-144 514.6 446 58.7
AL6G51420 Arabidopsis lyrata HOM05D006460 ORTHO05D008143 1.1e-143 514.2 494 53.4
BcaC01g06799 Brassica carinata HOM05D006460 ORTHO05D008143 1.1e-143 514.2 495 53.3
BolC3t16117H Brassica oleracea HOM05D006460 ORTHO05D008143 1.1e-143 514.2 495 53.3
BraA03t12325Z Brassica rapa HOM05D006460 ORTHO05D008143 3.2e-143 512.7 493 53.8
SalBow6G2760 Salvia bowleyana HOM05D006460 ORTHO05D008143 5.4e-143 511.9 495 52.5
AUR62011736 Chenopodium quinoa HOM05D006460 ORTHO05D008143 1.6e-142 510.4 489 52.4
Nitab4.5_0000222g0270 Nicotiana tabacum HOM05D006460 ORTHO05D008143 2.3e-141 506.5 525 52.4
Migut.D00030 Erythranthe guttata HOM05D006460 ORTHO05D008143 8.6e-141 504.6 497 53.1
MSTRG.21724 Avicennia marina HOM05D006460 ORTHO05D008143 2.1e-139 500.0 496 52.8
PSO357G0369 Papaver somniferum HOM05D006460 ORTHO05D008143 1.4e-138 497.3 491 51.5
CDE08G1018 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 1.2e-137 494.2 503 52.3
Aa31LG5G1480 Aethionema arabicum HOM05D006460 ORTHO05D008143 2.0e-137 493.4 520 50.0
SGA_v2.0_scaffold417G51258 Striga asiatica HOM05D006460 ORTHO05D008143 7.6e-137 491.5 495 52.7
Hund09677 Selenicereus undatus HOM05D006460 ORTHO05D008143 1.7e-136 490.3 494 51.2
Lsat_1_v5_gn_8_167341 Lactuca sativa HOM05D006460 ORTHO05D008143 6.4e-136 488.4 486 53.7
Rhsim13G0001100 Rhododendron simsii HOM05D006460 ORTHO05D008143 5.4e-135 485.3 448 55.8
ATR0796G118 Amborella trichopoda HOM05D006460 ORTHO05D008143 1.2e-129 467.6 526 46.6
EL10As5g23582 Beta vulgaris HOM05D006460 ORTHO05D008143 5.8e-129 465.3 494 50.4
Eucgr.L00887 Eucalyptus grandis HOM05D006460 ORTHO05D008143 2.1e-123 446.8 381 59.3
ECA236G0789 Erigeron canadensis HOM05D004810 ORTHO05D006272 4.0e-122 442.6 454 52.0
HPP92_010877 Vanilla planifolia HOM05D000746 ORTHO05D000573 9.0e-122 441.4 489 46.6
MELO3C023610.2 Cucumis melo HOM05D006460 ORTHO05D008143 1.5e-121 440.7 475 48.4
Nitab4.5_0002994g0020 Nicotiana tabacum HOM05D006460 ORTHO05D008143 1.7e-120 437.2 521 47.4
CSS0008981 Camellia sinensis var. sinensis HOM05D006460 ORTHO05D008143 1.3e-115 421.0 392 54.6
PSO170G6216 Papaver somniferum HOM05D006460 ORTHO05D008143 4.0e-114 416.0 423 51.1
PSO384G3244 Papaver somniferum HOM05D006460 ORTHO05D008143 5.3e-114 415.6 421 51.1
CsaV3_7G030430 Cucumis sativus L. HOM05D006460 ORTHO05D008143 2.6e-113 413.3 398 53.5
Ah.11g045760 Amaranthus hybridus HOM05D006460 ORTHO05D008143 2.3e-109 400.2 494 45.7
Dinv33158 Davidia involucrata HOM05D001974 ORTHO05D001995 2.3e-109 400.2 367 55.6
Pp3c21_16200 Physcomitrium patens HOM05D006460 ORTHO05D008143 2.0e-105 387.1 554 38.1
AagrBONN_evm.TU.Sc2ySwM_228.322 Anthoceros agrestis HOM05D006460 ORTHO05D008143 6.5e-104 382.1 496 40.5
Zm00001eb211340 Zea mays HOM05D006460 ORTHO05D008143 1.2e-102 377.9 411 48.7
AagrBONN_evm.TU.Sc2ySwM_344.3324 Anthoceros agrestis HOM05D006460 ORTHO05D008143 2.3e-101 373.6 497 40.2
Mapoly0095s0050 Marchantia polymorpha HOM05D006460 ORTHO05D008143 4.1e-98 362.8 520 37.7
Sopen01g029980 Solanum pennellii HOM05D006460 ORTHO05D008143 9.7e-92 341.7 290 59.0
SMO010G0007 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 2.0e-89 334.0 493 37.7
Peaxi162Scf00919g00047 Petunia axillaris HOM05D006460 ORTHO05D008143 1.4e-82 311.2 388 45.4
MBI18_g28900_MAGBIO Magnolia biondii HOM05D006460 ORTHO05D008143 2.2e-75 287.3 471 37.2
unitig_578.g16638 Utricularia gibba HOM05D006460 ORTHO05D008143 3.3e-68 263.5 488 33.8
Os03g0833200 Oryza sativa ssp. japonica HOM05D006460 ORTHO05D008143 6.3e-51 206.1 285 41.8
MCO13G012 Micromonas commoda HOM05D006460 ORTHO05D008143 3.5e-49 200.3 496 31.2
SEGI_40178 Sequoiadendron giganteum HOM05D006460 ORTHO05D008143 7.3e-39 166.0 315 34.0
SMO339G0034 Selaginella moellendorffii HOM05D006460 ORTHO05D008143 1.5e-36 158.3 209 41.1
PRCOL_00001885 Prasinoderma coloniale HOM05D006460 ORTHO05D008143 2.6e-36 157.5 510 26.1
AUR62029044 Chenopodium quinoa HOM05D006460 ORTHO05D008143 2.2e-35 154.5 191 45.5
AUR62036055 Chenopodium quinoa HOM05D006460 ORTHO05D008143 3.7e-35 153.7 191 45.0
MD17G1281000 Malus domestica HOM05D006460 ORTHO05D008143 1.9e-34 151.4 272 34.9
CBR_g49426 Chara braunii HOM05D006460 ORTHO05D008143 1.5e-20 105.1 90 52.2
QL04p085746 Quercus lobata HOM05D006460 ORTHO05D008143 4.4e-20 103.6 107 50.5
AagrBONN_evm.TU.Sc2ySwM_228.45 Anthoceros agrestis HOM05D006460 ORTHO05D008143 7.1e-18 96.3 110 46.4
RcHm_v2.0_Chr7g0232271 Rosa chinensis HOM05D006460 ORTHO05D008143 1.1e-15 89.0 78 59.0
Hund09679 Selenicereus undatus HOM05D006460 ORTHO05D008143 1.6e-14 85.1 115 39.1
Cre16.g654992 Chlamydomonas reinhardtii HOM05D006460 ORTHO05D008143 4.2e-10 70.5 102 38.2
QL05p033637 Quercus lobata HOM05D000101 ORTHO05D000089 7.8e-09 66.2 68 47.1
AUR62007801 Chenopodium quinoa HOM05D006460 ORTHO05D008143 3.0e-08 64.3 65 50.8
CDE02G3709 Ceratophyllum demersum HOM05D006460 ORTHO05D008143 1.1e-07 62.4 44 59.1
AUR62043166 Chenopodium quinoa HOM05D006460 ORTHO05D008143 4.3e-07 60.5 64 50.0


User provided reference genes

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