Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G35324 Trifolium pratense HOM05D000047 ORTHO05D000589 6.9e-298 1026.5 521 100.0
TPR.G19305 Trifolium pratense HOM05D000047 ORTHO05D000589 2.8e-134 483.0 445 59.3
TPR.G5842 Trifolium pratense HOM05D000047 ORTHO05D000589 2.7e-100 370.2 452 50.0
TPR.G10353 Trifolium pratense HOM05D000014 ORTHO05D000589 4.4e-79 299.7 421 43.2
TPR.G18553 Trifolium pratense HOM05D000047 ORTHO05D000589 7.9e-76 288.9 396 45.2
TPR.G36848 Trifolium pratense HOM05D000047 ORTHO05D000589 1.3e-73 281.6 399 44.4
TPR.G22702 Trifolium pratense HOM05D000047 ORTHO05D000589 2.1e-68 264.2 280 55.0
TPR.G20468 Trifolium pratense HOM05D000047 ORTHO05D000589 2.5e-58 230.7 306 49.3
TPR.G10789 Trifolium pratense HOM05D000047 ORTHO05D000589 6.2e-57 226.1 126 85.7
TPR.G33037 Trifolium pratense HOM05D000047 ORTHO05D000589 7.2e-53 212.6 116 87.9
TPR.G35809 Trifolium pratense HOM05D000047 ORTHO05D000589 1.3e-49 201.8 108 89.8
TPR.G35555 Trifolium pratense HOM05D000047 ORTHO05D000589 6.5e-46 189.5 463 29.4
TPR.G22869 Trifolium pratense HOM05D056069 ORTHO05D010768 5.5e-45 186.4 592 29.9
TPR.G22150 Trifolium pratense HOM05D000047 ORTHO05D000589 3.7e-41 173.7 271 39.5
TPR.G17648 Trifolium pratense HOM05D000047 ORTHO05D000589 1.8e-40 171.4 492 28.0
TPR.G4327 Trifolium pratense HOM05D000047 ORTHO05D000589 5.3e-40 169.9 511 28.4
TPR.G35763 Trifolium pratense HOM05D000047 ORTHO05D000589 3.4e-39 167.2 510 28.2
TPR.G31393 Trifolium pratense HOM05D000047 ORTHO05D000589 6.5e-38 162.9 114 68.4
Ca_05624_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 3.2e-37 160.6 518 26.4
TPR.G35157 Trifolium pratense HOM05D002881 ORTHO05D000589 4.8e-33 146.7 377 27.9
TPR.G13572 Trifolium pratense HOM05D000047 ORTHO05D000589 1.0e-30 139.0 443 27.8
Thecc.10G123500 Theobroma cacao HOM05D000047 ORTHO05D000589 6.3e-25 119.8 307 30.0
Ca_24076_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 8.2e-25 119.4 335 29.6
Ca_12999_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.4e-24 118.6 443 26.2
Duzib205G1183 Durio zibethinus HOM05D000047 ORTHO05D000044 2.4e-24 117.9 533 24.2
TPR.G35080 Trifolium pratense HOM05D000047 ORTHO05D000589 3.1e-24 117.5 458 26.2
Ca_04841_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 3.5e-23 114.0 437 26.8
Duzib041G0625 Durio zibethinus HOM05D000047 ORTHO05D000044 4.5e-23 113.6 537 24.4
Duzib268G0258 Durio zibethinus HOM05D000047 ORTHO05D000589 1.3e-22 112.1 382 25.9
Duzib041G0566 Durio zibethinus HOM05D000047 ORTHO05D000044 3.8e-22 110.5 453 25.2
Ca_20345_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.1e-21 109.0 230 32.6
VMungo0331G0129 Vigna mungo HOM05D000047 ORTHO05D000589 1.5e-21 108.6 311 27.7
Ca_06778_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 7.2e-21 106.3 480 25.2
Duzib160G0848 Durio zibethinus HOM05D000047 ORTHO05D000589 1.2e-20 105.5 393 24.7
TPR.G14980 Trifolium pratense HOM05D000047 ORTHO05D000589 2.7e-20 104.4 198 34.3
Ca_06964_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000589 1.4e-19 102.1 238 31.5
Potri.008G142920 Populus trichocarpa HOM05D000047 ORTHO05D000589 2.3e-19 101.3 484 22.7
Ca_07062_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 3.0e-19 100.9 275 30.9
TPR.G22842 Trifolium pratense HOM05D000047 ORTHO05D000044 3.0e-19 100.9 445 23.1
Duzib168G2089 Durio zibethinus HOM05D000047 ORTHO05D000589 4.0e-19 100.5 256 30.1
Ca_02998_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 8.8e-19 99.4 383 25.1
Ca_05281_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 2.0e-18 98.2 242 30.6
TPR.G31129 Trifolium pratense HOM05D000047 ORTHO05D000589 3.4e-18 97.4 289 28.7
Ca_15675_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 2.2e-17 94.7 76 53.9
Actinidia34913 Actinidia chinensis HOM05D000047 ORTHO05D000589 2.8e-17 94.4 404 24.3
TPR.G20886 Trifolium pratense HOM05D009185 ORTHO05D010768 2.8e-17 94.4 148 35.1
Ca_01749_v3 Cicer arietinum L. HOM05D011496 ORTHO05D010768 5.4e-16 90.1 96 49.0
TPR.G36275 Trifolium pratense HOM05D000047 ORTHO05D010768 7.7e-15 86.3 197 28.4
Duzib114G0732 Durio zibethinus HOM05D000047 ORTHO05D000589 3.8e-14 84.0 177 32.8
Duzib248G1335 Durio zibethinus HOM05D000047 ORTHO05D000589 5.0e-14 83.6 100 44.0
AUR62037095 Chenopodium quinoa HOM05D009273 ORTHO05D011122 6.5e-14 83.2 312 26.0
Ca_02596_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 6.5e-14 83.2 215 27.9
TPR.G16375 Trifolium pratense HOM05D009185 ORTHO05D010768 8.5e-14 82.8 83 41.0
Ca_27971_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.9e-13 81.6 115 39.1
Thecc.03G050100 Theobroma cacao HOM05D000047 ORTHO05D000589 5.5e-13 80.1 221 28.1
vmacro07682 Vaccinium macrocarpon HOM05D000026 ORTHO05D000127 9.4e-13 79.3 300 25.3
Thecc.02G289400 Theobroma cacao HOM05D000414 ORTHO05D000276 1.2e-12 79.0 124 37.1
Sopen03g017560 Solanum pennellii HOM05D000047 ORTHO05D000044 2.1e-12 78.2 377 26.3
Duzib084G1197 Durio zibethinus HOM05D000047 ORTHO05D000044 4.7e-12 77.0 89 40.4
PGR031G0584 Punica granatum HOM05D000047 ORTHO05D007790 4.7e-12 77.0 392 20.9
PGR083G0363 Punica granatum HOM05D000047 ORTHO05D007790 4.7e-12 77.0 372 22.0
Thecc.05G094500 Theobroma cacao HOM05D000047 ORTHO05D000589 4.7e-12 77.0 50 60.0
COL.COLO4_37417 Corchorus olitorius HOM05D000047 ORTHO05D000589 1.0e-11 75.9 71 47.9
Ca_13231_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.8e-11 75.1 68 48.5
Duzib177G0032 Durio zibethinus HOM05D000047 ORTHO05D000589 5.2e-11 73.6 153 36.6
VMungo1127G1198 Vigna mungo HOM05D000066 ORTHO05D000589 5.2e-11 73.6 75 48.0
Duzib264G0666 Durio zibethinus HOM05D000047 ORTHO05D000589 2.0e-10 71.6 175 28.6
Medtr7g046515 Medicago truncatula HOM05D002881 ORTHO05D002983 2.0e-10 71.6 222 26.1
COL.COLO4_22341 Corchorus olitorius HOM05D000047 ORTHO05D000589 2.6e-10 71.2 50 52.0
Sopen12g009400 Solanum pennellii HOM05D000047 ORTHO05D000589 3.4e-10 70.9 289 24.2
Sopen05g016500 Solanum pennellii HOM05D000047 ORTHO05D000589 4.4e-10 70.5 364 24.2
Sopen12g010430 Solanum pennellii HOM05D000047 ORTHO05D000589 4.4e-10 70.5 313 24.3
Lalb_Chr03g0038251 Lupinus albus HOM05D000047 ORTHO05D000589 5.7e-10 70.1 385 21.8
PGR142G0396 Punica granatum HOM05D000047 ORTHO05D000589 5.7e-10 70.1 316 23.7
COL.COLO4_25238 Corchorus olitorius HOM05D000047 ORTHO05D000589 7.5e-10 69.7 208 28.8
Duzib213G0125 Durio zibethinus HOM05D000047 ORTHO05D000044 9.8e-10 69.3 336 22.6
PGR083G1005 Punica granatum HOM05D000047 ORTHO05D000044 9.8e-10 69.3 209 24.9
Sopen01g012890 Solanum pennellii HOM05D000047 ORTHO05D000044 9.8e-10 69.3 366 21.3
Sopen09g009160 Solanum pennellii HOM05D000047 ORTHO05D000044 9.8e-10 69.3 375 22.9
TPR.G18503 Trifolium pratense HOM05D009185 ORTHO05D010768 9.8e-10 69.3 64 43.8
TPR.G18586 Trifolium pratense HOM05D002881 ORTHO05D000589 1.3e-09 68.9 188 23.4
PGR118G0003 Punica granatum HOM05D000047 ORTHO05D007790 1.7e-09 68.6 209 24.9
Duzib106G2061 Durio zibethinus HOM05D000047 ORTHO05D000044 2.8e-09 67.8 325 22.8
Thecc.02G169500 Theobroma cacao HOM05D000047 ORTHO05D000589 2.8e-09 67.8 50 54.0
Thecc.09G142100 Theobroma cacao HOM05D000047 ORTHO05D000589 3.7e-09 67.4 96 35.4
VMungo0720G0831 Vigna mungo HOM05D000015 ORTHO05D048578 3.7e-09 67.4 65 47.7
AUR62042972 Chenopodium quinoa HOM05D009273 ORTHO05D011122 4.9e-09 67.0 394 22.1
Sopen06g006470 Solanum pennellii HOM05D000047 ORTHO05D000044 4.9e-09 67.0 304 22.7
Duzib268G1526 Durio zibethinus HOM05D000047 ORTHO05D000589 6.3e-09 66.6 53 47.2
Sopen02g008050 Solanum pennellii HOM05D000047 ORTHO05D000589 6.3e-09 66.6 505 20.6
Sopen09g027920 Solanum pennellii HOM05D000047 ORTHO05D000589 6.3e-09 66.6 462 21.6
TWI81G0102 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 6.3e-09 66.6 66 42.4
Sopen10g014590 Solanum pennellii HOM05D000047 ORTHO05D000589 8.3e-09 66.2 359 20.6
TWI15G0372 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 8.3e-09 66.2 65 43.1
TWI18G1396 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 8.3e-09 66.2 66 42.4
PGR031G1099 Punica granatum HOM05D000047 ORTHO05D000589 1.4e-08 65.5 412 21.4
Sopen12g021880 Solanum pennellii HOM05D000047 ORTHO05D000044 1.4e-08 65.5 344 21.2
TWI15G0628 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 1.4e-08 65.5 221 24.9
Sabra01G0123300 Salix brachista HOM05D000047 ORTHO05D000589 1.8e-08 65.1 69 40.6
Sopen04g013020 Solanum pennellii HOM05D000047 ORTHO05D000589 2.4e-08 64.7 249 24.9
Sopen05g021720 Solanum pennellii HOM05D000047 ORTHO05D000589 2.4e-08 64.7 373 22.0
Sopen06g006650 Solanum pennellii HOM05D000047 ORTHO05D000589 3.1e-08 64.3 318 22.6
Sopen11g017540 Solanum pennellii HOM05D000047 ORTHO05D000044 3.1e-08 64.3 336 21.4
Ca_22936_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 4.1e-08 63.9 45 60.0
PGR083G0665 Punica granatum HOM05D000047 ORTHO05D000589 4.1e-08 63.9 409 20.0
Sopen04g014710 Solanum pennellii HOM05D000047 ORTHO05D000044 4.1e-08 63.9 377 24.7
Sopen06g027270 Solanum pennellii HOM05D000047 ORTHO05D000589 4.1e-08 63.9 400 22.2
Sopen12g009930 Solanum pennellii HOM05D000047 ORTHO05D000589 4.1e-08 63.9 356 20.2
Sopen05g029830 Solanum pennellii HOM05D000047 ORTHO05D000589 5.4e-08 63.5 399 21.3
Sopen11g020130 Solanum pennellii HOM05D000047 ORTHO05D000044 7.0e-08 63.2 397 20.9
Sopen11g023720 Solanum pennellii HOM05D000047 ORTHO05D000044 7.0e-08 63.2 505 22.0
Sopen12g019590 Solanum pennellii HOM05D000047 ORTHO05D000589 7.0e-08 63.2 371 23.2
Thecc.K0006900 Theobroma cacao HOM05D002881 ORTHO05D000589 7.0e-08 63.2 146 33.6
QL08p004401 Quercus lobata HOM05D000047 ORTHO05D000589 9.2e-08 62.8 107 30.8
PGR031G1973 Punica granatum HOM05D000047 ORTHO05D000044 1.2e-07 62.4 229 22.7
TPR.G40716 Trifolium pratense HOM05D000047 ORTHO05D000589 1.2e-07 62.4 61 59.0
Sopen07g009210 Solanum pennellii HOM05D000047 ORTHO05D000044 1.6e-07 62.0 416 21.6
Sopen02g008640 Solanum pennellii HOM05D000047 ORTHO05D000589 2.0e-07 61.6 431 22.5
TWI09G0076 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 2.0e-07 61.6 71 38.0
PGR142G1015 Punica granatum HOM05D000047 ORTHO05D007790 3.5e-07 60.8 195 24.6
Sopen03g019340 Solanum pennellii HOM05D000047 ORTHO05D000589 3.5e-07 60.8 415 21.4
Sopen10g015870 Solanum pennellii HOM05D000047 ORTHO05D000589 3.5e-07 60.8 415 21.4
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 4.5e-07 60.5 407 20.4
Sopen04g006090 Solanum pennellii HOM05D000047 ORTHO05D000589 4.5e-07 60.5 404 20.8
Sopen11g013030 Solanum pennellii HOM05D000047 ORTHO05D000044 4.5e-07 60.5 144 31.2
AUR62041897 Chenopodium quinoa HOM05D009273 ORTHO05D011122 5.9e-07 60.1 178 27.5
Ca_02960_v3 Cicer arietinum L. HOM05D010731 ORTHO05D000589 5.9e-07 60.1 167 28.1
Sopen10g019320 Solanum pennellii HOM05D000047 ORTHO05D000589 5.9e-07 60.1 402 21.4
MBI05_g05358_MAGBIO Magnolia biondii HOM05D057483 ORTHO05D023234 7.7e-07 59.7 84 35.7
Sopen00g005610 Solanum pennellii HOM05D000047 ORTHO05D000044 7.7e-07 59.7 138 29.0
Sopen01g020560 Solanum pennellii HOM05D000047 ORTHO05D000589 7.7e-07 59.7 167 26.9
Sopen04g014060 Solanum pennellii HOM05D000047 ORTHO05D000589 7.7e-07 59.7 393 21.4
Sopen09g020400 Solanum pennellii HOM05D000047 ORTHO05D000589 7.7e-07 59.7 396 21.2
TWI73G1077 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 7.7e-07 59.7 71 36.6
PGR031G3326 Punica granatum HOM05D000047 ORTHO05D000589 1.0e-06 59.3 428 18.7
PGR083G1772 Punica granatum HOM05D000047 ORTHO05D007790 1.3e-06 58.9 168 26.2
Sopen03g006490 Solanum pennellii HOM05D000047 ORTHO05D000589 1.3e-06 58.9 162 26.5
Sopen06g012230 Solanum pennellii HOM05D000047 ORTHO05D000589 1.3e-06 58.9 257 26.5
Sopen08g009730 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-06 58.9 298 19.8
Sopen00g007930 Solanum pennellii HOM05D000047 ORTHO05D000044 1.7e-06 58.5 154 28.6
Sopen03g009440 Solanum pennellii HOM05D000047 ORTHO05D000589 1.7e-06 58.5 162 27.2
Sopen07g005350 Solanum pennellii HOM05D000047 ORTHO05D000589 1.7e-06 58.5 125 28.8
Sopen07g024100 Solanum pennellii HOM05D000047 ORTHO05D000589 1.7e-06 58.5 160 26.2
Sopen10g024610 Solanum pennellii HOM05D000047 ORTHO05D000589 1.7e-06 58.5 395 20.3
Sopen11g013060 Solanum pennellii HOM05D000047 ORTHO05D000589 1.7e-06 58.5 157 26.1
Sopen01g008760 Solanum pennellii HOM05D000047 ORTHO05D000589 2.3e-06 58.2 162 25.9
PGSC0003DMG400013592 Solanum tuberosum HOM05D000047 ORTHO05D000589 2.3e-06 58.2 176 26.1
COL.COLO4_37726 Corchorus olitorius HOM05D000047 ORTHO05D000589 2.9e-06 57.8 90 33.3
Duzib268G0838 Durio zibethinus HOM05D000092 ORTHO05D000042 2.9e-06 57.8 140 29.3
PGR004G0317 Punica granatum HOM05D000047 ORTHO05D007790 2.9e-06 57.8 250 24.0
PGR051G0001 Punica granatum HOM05D000047 ORTHO05D000589 2.9e-06 57.8 108 32.4
Sopen06g007770 Solanum pennellii HOM05D000047 ORTHO05D000044 2.9e-06 57.8 144 29.9
Sopen12g012830 Solanum pennellii HOM05D000047 ORTHO05D000589 2.9e-06 57.8 400 20.5
TPR.G40512 Trifolium pratense HOM05D000047 ORTHO05D000589 2.9e-06 57.8 74 41.9
PGR031G1989 Punica granatum HOM05D000047 ORTHO05D000589 3.8e-06 57.4 112 28.6
PGR031G2164 Punica granatum HOM05D000047 ORTHO05D000589 3.8e-06 57.4 112 28.6
PGR044G2529 Punica granatum HOM05D000047 ORTHO05D000044 3.8e-06 57.4 112 28.6
PGR100G0012 Punica granatum HOM05D000047 ORTHO05D000044 3.8e-06 57.4 112 28.6
PGR102G1128 Punica granatum HOM05D000047 ORTHO05D000589 3.8e-06 57.4 112 28.6
Sopen06g009420 Solanum pennellii HOM05D000047 ORTHO05D000589 3.8e-06 57.4 133 29.3
Sopen10g010910 Solanum pennellii HOM05D000047 ORTHO05D000589 5.0e-06 57.0 338 21.9
Sopen12g025230 Solanum pennellii HOM05D000047 ORTHO05D000044 5.0e-06 57.0 397 20.2
Sopen11g009430 Solanum pennellii HOM05D000047 ORTHO05D000589 6.6e-06 56.6 162 26.5
PGR004G1308 Punica granatum HOM05D000047 ORTHO05D007790 8.6e-06 56.2 70 35.7
PGR004G1633 Punica granatum HOM05D000047 ORTHO05D007790 8.6e-06 56.2 70 35.7
PGR142G1638 Punica granatum HOM05D000047 ORTHO05D000589 8.6e-06 56.2 70 35.7
Sopen00g013170 Solanum pennellii HOM05D000047 ORTHO05D000589 8.6e-06 56.2 174 25.9
Sopen03g014790 Solanum pennellii HOM05D000047 ORTHO05D000589 8.6e-06 56.2 356 22.5
Sopen10g011910 Solanum pennellii HOM05D000047 ORTHO05D000589 8.6e-06 56.2 159 25.2
TWI34G1550 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 8.6e-06 56.2 63 38.1


User provided reference genes

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