Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3482 Trifolium pratense HOM05D005540 ORTHO05D006932 1.2e-205 719.5 359 100.0
Medtr5g079730 Medicago truncatula HOM05D005540 ORTHO05D006932 3.2e-177 625.2 359 90.3
Psat2g040920 Pisum sativum HOM05D005540 ORTHO05D006932 4.6e-176 621.3 359 89.1
Ca_05867_v3 Cicer arietinum L. HOM05D005540 ORTHO05D006932 1.8e-167 592.8 309 95.5
LjContig00141g0003223 Lotus japonicus HOM05D005540 ORTHO05D006932 7.6e-163 577.4 340 86.2
Lalb_Chr18g0053271 Lupinus albus HOM05D005540 ORTHO05D006932 3.5e-160 568.5 318 87.7
CiPaw.03G067900 Carya illinoinensis HOM05D005540 ORTHO05D006932 4.3e-158 561.6 318 87.1
Dinv14871 Davidia involucrata HOM05D005540 ORTHO05D006932 6.2e-157 557.8 318 87.1
CSS0010845 Camellia sinensis var. sinensis HOM05D005540 ORTHO05D006932 1.1e-156 557.0 318 85.8
Potri.017G129000 Populus trichocarpa HOM05D005540 ORTHO05D006932 1.4e-156 556.6 330 84.2
Atru.chr4.1672 Acer truncatum HOM05D005540 ORTHO05D006932 5.3e-156 554.7 340 82.6
VMungo1383G3344 Vigna mungo HOM05D005540 ORTHO05D006932 9.0e-156 553.9 329 83.9
Glyma.18G038600 Glycine max HOM05D005540 ORTHO05D006932 1.2e-155 553.5 318 86.5
Cfa007847 Carpinus fangiana HOM05D005540 ORTHO05D006932 1.5e-155 553.1 318 84.9
Glyma.11G218700 Glycine max HOM05D005540 ORTHO05D006932 5.8e-155 551.2 318 85.8
CANSAT78G2033 Cannabis sativa HOM05D005540 ORTHO05D006932 4.9e-154 548.1 313 86.3
Manes.07G054300 Manihot esculenta HOM05D005540 ORTHO05D006932 8.4e-154 547.4 315 85.7
Eucgr.F02818 Eucalyptus grandis HOM05D005540 ORTHO05D006932 1.9e-153 546.2 311 86.5
Thecc.04G122100 Theobroma cacao HOM05D005540 ORTHO05D006932 1.2e-152 543.5 328 82.6
Phvul.001G232200 Phaseolus vulgaris HOM05D005540 ORTHO05D006932 2.1e-152 542.7 329 82.1
TWI77G0639 Tripterygium wilfordii HOM05D005540 ORTHO05D006932 2.1e-152 542.7 318 84.6
COL.COLO4_15705 Corchorus olitorius HOM05D005540 ORTHO05D006932 3.5e-152 542.0 307 86.3
Ciclev10012086m.g Citrus clementina HOM05D005540 ORTHO05D006932 1.0e-151 540.4 331 82.8
CsaV3_3G021680 Cucumis sativus L. HOM05D005540 ORTHO05D006932 1.3e-151 540.0 309 84.5
Duzib138G0816 Durio zibethinus HOM05D005540 ORTHO05D006932 1.3e-151 540.0 317 83.0
TAR629G0151 Trochodendron aralioides HOM05D005540 ORTHO05D006932 3.0e-151 538.9 318 82.7
THA.LOC104822414 Tarenaya hassleriana HOM05D005540 ORTHO05D006932 5.1e-151 538.1 331 81.3
vmacro18057 Vaccinium macrocarpon HOM05D005540 ORTHO05D006932 1.5e-150 536.6 326 81.3
RcHm_v2.0_Chr2g0122561 Rosa chinensis HOM05D005540 ORTHO05D006932 1.9e-150 536.2 314 84.1
Solyc02g091340.4 Solanum lycopersicum HOM05D005540 ORTHO05D006932 9.7e-150 533.9 322 81.7
Sopen02g035960 Solanum pennellii HOM05D005540 ORTHO05D006932 9.7e-150 533.9 322 81.7
GSVIVG01030869001 Vitis vinifera HOM05D005540 ORTHO05D006932 1.3e-149 533.5 308 85.1
MSTRG.23613 Avicennia marina HOM05D005540 ORTHO05D006932 2.2e-149 532.7 318 84.0
Sed0009967 Sechium edule HOM05D005540 ORTHO05D006932 2.2e-149 532.7 308 84.1
Migut.H00866 Erythranthe guttata HOM05D005540 ORTHO05D006932 2.8e-149 532.3 307 84.7
Gohir.D11G168100 Gossypium hirsutum HOM05D005540 ORTHO05D006932 4.8e-149 531.6 308 85.4
Gorai.007G179400 Gossypium raimondii HOM05D005540 ORTHO05D006932 4.8e-149 531.6 308 85.4
C04p44790 Brassica napus HOM05D005540 ORTHO05D006932 6.3e-149 531.2 316 82.0
ClCG05G010900 Citrullus lanatus HOM05D005540 ORTHO05D006932 6.3e-149 531.2 319 81.8
PGR004G0611 Punica granatum HOM05D005540 ORTHO05D006932 1.4e-148 530.0 362 74.6
BraA04t16769Z Brassica rapa HOM05D005540 ORTHO05D006932 1.8e-148 529.6 316 81.6
Cc07_g08210 Coffea canephora HOM05D005540 ORTHO05D006932 1.8e-148 529.6 327 81.3
Thhalv10027854m.g Eutrema salsugineum HOM05D005540 ORTHO05D006932 1.8e-148 529.6 307 84.0
BcaC02g09619 Brassica carinata HOM05D005540 ORTHO05D006932 3.1e-148 528.9 307 83.7
arahy.Tifrunner.gnm1.ann1.A8AWVV Arachis hypogaea HOM05D005540 ORTHO05D006932 4.1e-148 528.5 321 83.2
CARHR214890 Cardamine hirsuta HOM05D005540 ORTHO05D006932 5.3e-148 528.1 321 81.3
Actinidia39198 Actinidia chinensis HOM05D005540 ORTHO05D006932 6.9e-148 527.7 308 84.7
BcaB06g27151 Brassica carinata HOM05D005540 ORTHO05D006932 9.0e-148 527.3 326 79.8
Gohir.A11G161800 Gossypium hirsutum HOM05D005540 ORTHO05D006932 1.2e-147 526.9 308 85.1
arahy.Tifrunner.gnm1.ann1.IJ36EI Arachis hypogaea HOM05D005540 ORTHO05D006932 1.5e-147 526.6 321 82.9
BolC4t26053H Brassica oleracea HOM05D005540 ORTHO05D006932 1.5e-147 526.6 317 81.7
Sp7g04170 Schrenkiella parvula HOM05D005540 ORTHO05D006932 2.0e-147 526.2 307 83.4
Aa31LG9G17310 Aethionema arabicum HOM05D005540 ORTHO05D006932 2.6e-147 525.8 327 80.4
Carub.0007s3304 Capsella rubella HOM05D005540 ORTHO05D006932 3.4e-147 525.4 339 78.5
A04p11070 Brassica napus HOM05D005540 ORTHO05D006932 4.5e-147 525.0 317 81.4
AT5G37850 Arabidopsis thaliana HOM05D005540 ORTHO05D006932 1.7e-146 523.1 307 83.4
ECA232G3523 Erigeron canadensis HOM05D005540 ORTHO05D006932 2.9e-146 522.3 307 83.1
AL7G46750 Arabidopsis lyrata HOM05D005540 ORTHO05D006932 5.0e-146 521.5 307 83.4
Nitab4.5_0004399g0070 Nicotiana tabacum HOM05D005540 ORTHO05D006932 1.1e-145 520.4 345 76.5
FAN28G0493 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.9e-145 519.6 405 69.4
Aqoxy3G00138 Aquilegia oxysepala HOM05D005540 ORTHO05D006932 2.5e-145 519.2 309 83.5
Prupe.3G158100 Prunus persica HOM05D005540 ORTHO05D006932 1.0e-143 513.8 331 78.9
Lj4A178T43 Lonicera japonica HOM05D005540 ORTHO05D006932 1.4e-143 513.5 344 77.9
ATR0686G023 Amborella trichopoda HOM05D005540 ORTHO05D006932 5.1e-143 511.5 303 84.8
PSO017G2970 Papaver somniferum HOM05D005540 ORTHO05D006932 1.1e-142 510.4 312 79.8
Zm00001eb135500 Zea mays HOM05D005540 ORTHO05D006932 5.3e-140 501.5 305 80.7
Sed0014193 Sechium edule HOM05D005540 ORTHO05D006932 2.6e-139 499.2 310 79.0
Os12g0600400 Oryza sativa ssp. japonica HOM05D005540 ORTHO05D006932 3.4e-139 498.8 307 79.8
CAN.G625.83 Capsicum annuum HOM05D005540 ORTHO05D006932 5.0e-138 495.0 307 80.5
Sabra17G0107500 Salix brachista HOM05D005540 ORTHO05D006932 2.7e-136 489.2 331 77.0
EL10Ac2g04488 Beta vulgaris HOM05D005540 ORTHO05D006932 1.8e-135 486.5 329 75.4
MD12G1075700 Malus domestica HOM05D005540 ORTHO05D006932 8.2e-133 477.6 360 70.3
Duzib133G1255 Durio zibethinus HOM05D005540 ORTHO05D006932 7.0e-132 474.6 307 77.9
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 1.2e-131 473.8 306 77.1
Lsat_1_v5_gn_4_154720 Lactuca sativa HOM05D005540 ORTHO05D006932 3.5e-131 472.2 344 71.2
Dinv19006 Davidia involucrata HOM05D005540 ORTHO05D006932 2.2e-130 469.5 274 84.3
FAN23G2620 Fragaria x ananassa HOM05D005540 ORTHO05D006932 8.5e-130 467.6 316 76.3
Nitab4.5_0002248g0040 Nicotiana tabacum HOM05D005540 ORTHO05D006932 1.1e-129 467.2 337 72.7
Rhsim08G0085100 Rhododendron simsii HOM05D005540 ORTHO05D006932 8.0e-128 461.1 499 53.7
HPP92_024102 Vanilla planifolia HOM05D005540 ORTHO05D006932 1.4e-127 460.3 359 65.7
SEGI_01535 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 1.8e-127 459.9 325 72.0
arahy.Tifrunner.gnm1.ann1.32A9M8 Arachis hypogaea HOM05D005540 ORTHO05D006932 2.0e-126 456.4 289 79.9
CDE04G3097 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 2.0e-126 456.4 360 67.2
Peaxi162Scf00803g00528 Petunia axillaris HOM05D005540 ORTHO05D006932 9.1e-124 447.6 311 74.0
PSO478G5258 Papaver somniferum HOM05D005540 ORTHO05D006932 2.2e-122 443.0 280 77.9
QL11p004195 Quercus lobata HOM05D005540 ORTHO05D006932 1.1e-121 440.7 419 58.0
Sed0021451 Sechium edule HOM05D005540 ORTHO05D006932 1.8e-119 433.3 306 70.6
Pp3c7_20600 Physcomitrium patens HOM05D005540 ORTHO05D006932 4.0e-119 432.2 308 69.8
Atru.BG.179.p Acer truncatum HOM05D005540 ORTHO05D006932 2.0e-118 429.9 309 74.1
SGA_v2.0_scaffold49G18144 Striga asiatica HOM05D005540 ORTHO05D006932 1.3e-117 427.2 252 83.3
Lsat_1_v5_gn_0_4201 Lactuca sativa HOM05D005540 ORTHO05D006932 7.0e-116 421.4 280 77.9
Sc14g0004860 Simmondsia chinensis HOM05D005540 ORTHO05D006932 1.3e-114 417.2 238 84.5
Ah.10g037980 Amaranthus hybridus HOM05D005540 ORTHO05D006932 2.9e-114 416.0 307 70.7
Mapoly0043s0025 Marchantia polymorpha HOM05D005540 ORTHO05D006932 2.9e-114 416.0 306 66.7
CDE06G0494 Ceratophyllum demersum HOM05D005540 ORTHO05D006932 1.1e-113 414.1 262 79.0
Pp3c11_8570 Physcomitrium patens HOM05D005540 ORTHO05D006932 2.1e-112 409.8 306 65.7
FvH4_1g24900 Fragaria vesca HOM05D005540 ORTHO05D006932 2.7e-112 409.5 227 87.2
Hma1.2p1_0283F.1_g113550 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 6.8e-111 404.8 308 70.5
SMO117G0213 Selaginella moellendorffii HOM05D005540 ORTHO05D006932 5.9e-107 391.7 300 65.0
SalBow3G0445 Salvia bowleyana HOM05D005540 ORTHO05D006932 6.8e-103 378.3 255 75.3
AagrBONN_evm.TU.Sc2ySwM_344.3276 Anthoceros agrestis HOM05D005540 ORTHO05D006932 3.7e-101 372.5 262 69.1
DCAR_025877 Daucus carota HOM05D005540 ORTHO05D006932 5.0e-98 362.1 219 80.4
MBI16_g05922_MAGBIO Magnolia biondii HOM05D005540 ORTHO05D006932 3.3e-97 359.4 244 73.8
Nn4g24119 Nelumbo nucifera HOM05D005540 ORTHO05D006932 5.8e-94 348.6 318 59.7
Sed0017329 Sechium edule HOM05D005540 ORTHO05D006932 2.2e-93 346.7 228 72.8
HPP92_024131 Vanilla planifolia HOM05D005540 ORTHO05D006932 3.2e-92 342.8 237 72.2
AUR62023244 Chenopodium quinoa HOM05D005540 ORTHO05D006932 1.1e-89 334.3 307 59.3
MCO05G093 Micromonas commoda HOM05D005540 ORTHO05D006932 5.6e-89 332.0 299 58.2
Hund16203 Selenicereus undatus HOM05D005540 ORTHO05D006932 8.3e-77 291.6 184 77.2
SGA_v2.0_scaffold6G03270 Striga asiatica HOM05D005540 ORTHO05D006932 1.6e-75 287.3 177 78.5
Cre03.g173800 Chlamydomonas reinhardtii HOM05D005540 ORTHO05D006932 4.6e-75 285.8 304 52.0
Haze_14219 Corylus avellana HOM05D005540 ORTHO05D006932 4.7e-72 275.8 216 68.5
Migut.H00263 Erythranthe guttata HOM05D005540 ORTHO05D006932 1.7e-69 267.3 158 83.5
FAN26G0473 Fragaria x ananassa HOM05D005540 ORTHO05D006932 1.0e-66 258.1 488 37.1
Oeu030810.1 Olea europaea HOM05D005540 ORTHO05D006932 1.9e-65 253.8 157 82.8
CBR_g12736 Chara braunii HOM05D005540 ORTHO05D006932 4.8e-64 249.2 153 77.8
Cpa.g.sc116.24 Carica papaya HOM05D005540 ORTHO05D006932 1.3e-58 231.1 143 79.7
Nn3g18203 Nelumbo nucifera HOM05D005540 ORTHO05D006932 2.3e-58 230.3 120 92.5
Cpa.g.sc116.26 Carica papaya HOM05D005540 ORTHO05D006932 8.7e-58 228.4 120 89.2
Hund16202 Selenicereus undatus HOM05D005540 ORTHO05D006932 2.8e-48 196.8 228 50.4
SHI09520 Sapria himalayana HOM05D005540 ORTHO05D006932 8.1e-48 195.3 113 82.3
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 2.5e-41 173.7 267 34.5
Nn3g18202 Nelumbo nucifera HOM05D005540 ORTHO05D006932 8.4e-37 158.7 99 76.8
Haze_26639 Corylus avellana HOM05D005540 ORTHO05D006932 2.5e-33 147.1 287 32.4
Atru.chr4.2426 Acer truncatum HOM05D005540 ORTHO05D006932 1.1e-28 131.7 66 92.4
Cfa022314 Carpinus fangiana HOM05D005540 ORTHO05D006932 2.0e-25 120.9 325 26.5
FAN26G3341 Fragaria x ananassa HOM05D005540 ORTHO05D006932 9.7e-25 118.6 58 98.3
SalBow3G4194 Salvia bowleyana HOM05D005540 ORTHO05D006932 1.7e-24 117.9 79 79.7
MELO3C031731.2 Cucumis melo HOM05D005540 ORTHO05D006932 2.2e-24 117.5 63 87.3
AUR62023196 Chenopodium quinoa HOM05D005540 ORTHO05D006932 8.2e-24 115.5 56 98.2
Hma1.2p1_0179F.1_g079120 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 1.8e-23 114.4 64 87.5
MELO3C020384.2 Cucumis melo HOM05D005540 ORTHO05D006932 6.9e-23 112.5 70 74.3
SHI09525 Sapria himalayana HOM05D005540 ORTHO05D006932 7.9e-19 99.0 75 69.3
arahy.Tifrunner.gnm1.ann1.XYVL4V Arachis hypogaea HOM05D005540 ORTHO05D023714 1.9e-12 77.8 43 83.7
SEGI_04261 Sequoiadendron giganteum HOM05D005540 ORTHO05D006932 5.5e-12 76.3 65 58.5
Hma1.2p1_0179F.1_g079130 Hydrangea macrophylla HOM05D005540 ORTHO05D006932 2.3e-10 70.9 33 93.9
SHI09501 Sapria himalayana HOM05D005540 ORTHO05D006932 8.2e-08 62.4 55 58.2
Duzib132G1177 Durio zibethinus HOM05D005536 ORTHO05D006999 1.1e-07 62.0 130 30.8
AL1G36500 Arabidopsis lyrata HOM05D005536 ORTHO05D006999 1.6e-06 58.2 102 34.3
PGR042G3208 Punica granatum HOM05D005536 ORTHO05D006999 1.6e-06 58.2 110 32.7
Gohir.A13G035900 Gossypium hirsutum HOM05D005536 ORTHO05D006999 2.0e-06 57.8 102 32.4
AUR62007953 Chenopodium quinoa HOM05D005536 ORTHO05D006999 2.6e-06 57.4 102 33.3
Potri.003G015700 Populus trichocarpa HOM05D005536 ORTHO05D006999 2.6e-06 57.4 102 34.3
BraA09t39668Z Brassica rapa HOM05D005536 ORTHO05D006999 3.5e-06 57.0 102 32.4
TAR376G0002 Trochodendron aralioides HOM05D005536 ORTHO05D006999 3.5e-06 57.0 102 33.3
Sp1g20400 Schrenkiella parvula HOM05D005536 ORTHO05D006999 5.9e-06 56.2 102 33.3
A09p41800 Brassica napus HOM05D005536 ORTHO05D006999 7.7e-06 55.8 102 33.3
Gohir.D13G034200 Gossypium hirsutum HOM05D005536 ORTHO05D006999 7.7e-06 55.8 102 31.4
Gorai.013G038700 Gossypium raimondii HOM05D005536 ORTHO05D006999 7.7e-06 55.8 102 31.4
Lj6g0001247 Lotus japonicus HOM05D005536 ORTHO05D006999 7.7e-06 55.8 102 33.3


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