Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34219 Trifolium pratense HOM05D016747 ORTHO05D412716 2.1e-277 958.4 469 100.0
TPR.G20697 Trifolium pratense HOM05D016747 ORTHO05D410511 7.2e-28 129.4 343 34.4
TPR.G36048 Trifolium pratense HOM05D001572 ORTHO05D000733 2.1e-19 101.3 101 61.4
TPR.G17195 Trifolium pratense HOM05D021335 ORTHO05D411244 1.8e-18 98.2 88 69.3
TPR.G35715 Trifolium pratense HOM05D021335 ORTHO05D411027 1.8e-15 88.2 87 65.5
TPR.G38704 Trifolium pratense HOM05D016747 ORTHO05D412751 7.7e-14 82.8 47 80.9
VMungo0540G1796 Vigna mungo HOM05D000327 ORTHO05D000218 6.5e-13 79.7 78 57.7
Phvul.006G131900 Phaseolus vulgaris HOM05D000327 ORTHO05D000218 8.5e-13 79.3 78 56.4
Glyma.09G020000 Glycine max HOM05D000327 ORTHO05D000218 7.2e-12 76.3 78 55.1
Ca_11353_v3 Cicer arietinum L. HOM05D000327 ORTHO05D000218 1.6e-11 75.1 77 51.9
Medtr2g028870 Medicago truncatula HOM05D000327 ORTHO05D000218 1.4e-10 72.0 78 50.0
Lj6g0022216 Lotus japonicus HOM05D000327 ORTHO05D000218 1.8e-10 71.6 78 55.1
Lalb_Chr09g0328781 Lupinus albus HOM05D000327 ORTHO05D000218 1.8e-10 71.6 77 50.6
TPR.G17509 Trifolium pratense HOM05D000327 ORTHO05D000218 3.0e-10 70.9 78 51.3
TPR.G40079 Trifolium pratense HOM05D016747 ORTHO05D413371 3.0e-10 70.9 56 75.0
Psat1g169960 Pisum sativum HOM05D000327 ORTHO05D000218 4.0e-10 70.5 78 52.6
Glyma.15G126500 Glycine max HOM05D000327 ORTHO05D000218 5.2e-10 70.1 77 51.9
Lalb_Chr16g0385331 Lupinus albus HOM05D000327 ORTHO05D000218 4.8e-08 63.5 77 45.5
Cfa000730 Carpinus fangiana HOM05D000327 ORTHO05D000218 8.2e-08 62.8 78 44.9
CSS0019482 Camellia sinensis var. sinensis HOM05D000327 ORTHO05D000218 1.4e-07 62.0 78 44.9
CSS0046162 Camellia sinensis var. sinensis HOM05D000327 ORTHO05D000218 1.4e-07 62.0 78 44.9
CSS0005495 Camellia sinensis var. sinensis HOM05D000327 ORTHO05D000218 3.1e-07 60.8 78 43.6
CSS0027721 Camellia sinensis var. sinensis HOM05D000327 ORTHO05D000218 3.1e-07 60.8 78 43.6
QL11p018227 Quercus lobata HOM05D000327 ORTHO05D000218 3.1e-07 60.8 78 43.6
Actinidia22379 Actinidia chinensis HOM05D000327 ORTHO05D000218 4.1e-07 60.5 78 39.7
CSS0048794 Camellia sinensis var. sinensis HOM05D000327 ORTHO05D000218 4.1e-07 60.5 78 43.6
CiPaw.09G079300 Carya illinoinensis HOM05D000327 ORTHO05D000218 4.1e-07 60.5 78 46.2
Ca_18777_v3 Cicer arietinum L. HOM05D000327 ORTHO05D000218 5.3e-07 60.1 77 44.2
Duzib192G0490 Durio zibethinus HOM05D000327 ORTHO05D000218 7.0e-07 59.7 78 41.0
Thecc.06G138800 Theobroma cacao HOM05D000327 ORTHO05D000218 7.0e-07 59.7 89 38.2
Ciclev10014925m.g Citrus clementina HOM05D000327 ORTHO05D000218 9.1e-07 59.3 78 39.7
Migut.M01965 Erythranthe guttata HOM05D000327 ORTHO05D000218 9.1e-07 59.3 78 41.0
Aqoxy1G01492 Aquilegia oxysepala HOM05D000327 ORTHO05D000218 1.6e-06 58.5 78 43.6
CiPaw.10G065900 Carya illinoinensis HOM05D000327 ORTHO05D000218 1.6e-06 58.5 78 43.6
Haze_06012 Corylus avellana HOM05D000327 ORTHO05D000218 2.0e-06 58.2 78 42.3
Atru.chr10.604 Acer truncatum HOM05D000327 ORTHO05D000218 2.7e-06 57.8 78 41.0
RcHm_v2.0_Chr5g0019691 Rosa chinensis HOM05D000327 ORTHO05D000218 2.7e-06 57.8 78 42.3
vmacro03500 Vaccinium macrocarpon HOM05D000327 ORTHO05D000218 3.5e-06 57.4 78 41.0
COL.COLO4_30955 Corchorus olitorius HOM05D000327 ORTHO05D000218 4.5e-06 57.0 93 37.6
Potri.015G117600 Populus trichocarpa HOM05D000327 ORTHO05D000218 4.5e-06 57.0 79 40.5
TPR.G28761 Trifolium pratense HOM05D016747 ORTHO05D411930 5.9e-06 56.6 38 76.3
TWI38G1261 Tripterygium wilfordii HOM05D000327 ORTHO05D000218 5.9e-06 56.6 78 41.0
Gohir.A05G144400 Gossypium hirsutum HOM05D000327 ORTHO05D000218 7.7e-06 56.2 78 38.5
Gohir.D05G146800 Gossypium hirsutum HOM05D000327 ORTHO05D000218 7.7e-06 56.2 78 38.5
Gorai.009G150700 Gossypium raimondii HOM05D000327 ORTHO05D000218 7.7e-06 56.2 78 38.5
Manes.16G047576 Manihot esculenta HOM05D000327 ORTHO05D000218 7.7e-06 56.2 78 41.0
Sabra12G0089700 Salix brachista HOM05D000327 ORTHO05D000218 7.7e-06 56.2 78 41.0


User provided reference genes

Program Settings