Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G34160 Trifolium pratense HOM05D005156 ORTHO05D006710 9.6e-187 656.8 348 100.0
Psat7g227760 Pisum sativum HOM05D005156 ORTHO05D006710 5.8e-160 567.8 348 86.5
Lj3g0017854 Lotus japonicus HOM05D005156 ORTHO05D006710 4.8e-154 548.1 342 84.5
Glyma.09G002700 Glycine max HOM05D005156 ORTHO05D006710 1.1e-145 520.4 344 80.2
Lalb_Chr10g0094741 Lupinus albus HOM05D005156 ORTHO05D006710 5.9e-144 514.6 340 80.0
Ca_12758_v3 Cicer arietinum L. HOM05D005156 ORTHO05D006710 6.5e-143 511.1 369 77.8
Cfa009832 Carpinus fangiana HOM05D005156 ORTHO05D006710 1.1e-139 500.4 339 77.6
VMungo1383G1089 Vigna mungo HOM05D005156 ORTHO05D006710 1.5e-139 500.0 349 75.4
Phvul.011G080400 Phaseolus vulgaris HOM05D005156 ORTHO05D006710 6.3e-138 494.6 341 76.0
Hma1.2p1_1115F.1_g258845 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 1.8e-137 493.0 338 76.9
Potri.001G254000 Populus trichocarpa HOM05D005156 ORTHO05D006710 4.5e-136 488.4 341 76.5
CiPaw.13G153000 Carya illinoinensis HOM05D005156 ORTHO05D006710 5.9e-136 488.0 337 74.8
TAR626G1548 Trochodendron aralioides HOM05D005156 ORTHO05D006710 5.0e-135 485.0 342 74.9
Actinidia16358 Actinidia chinensis HOM05D005156 ORTHO05D006710 1.5e-134 483.4 342 74.6
GSVIVG01037376001 Vitis vinifera HOM05D005156 ORTHO05D006710 2.5e-134 482.6 343 76.1
Atru.chr3.2617 Acer truncatum HOM05D005156 ORTHO05D006710 9.4e-134 480.7 341 75.1
CSS0001612 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 1.6e-133 479.9 342 74.3
RcHm_v2.0_Chr5g0050911 Rosa chinensis HOM05D005156 ORTHO05D006710 2.7e-133 479.2 337 74.5
MD11G1196200 Malus domestica HOM05D005156 ORTHO05D006710 3.6e-133 478.8 341 73.9
CSS0030488 Camellia sinensis var. sinensis HOM05D005156 ORTHO05D006710 6.1e-133 478.0 338 74.6
PSO210G1653 Papaver somniferum HOM05D005156 ORTHO05D006710 8.0e-133 477.6 338 74.6
Aqoxy8s002 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 1.8e-132 476.5 338 74.0
CsaV3_1G043140 Cucumis sativus L. HOM05D005156 ORTHO05D006710 1.8e-132 476.5 338 74.3
arahy.Tifrunner.gnm1.ann1.KCM926 Arachis hypogaea HOM05D005156 ORTHO05D006710 4.0e-132 475.3 342 77.8
Ciclev10015838m.g Citrus clementina HOM05D005156 ORTHO05D006710 5.2e-132 474.9 328 76.2
MSTRG.18451 Avicennia marina HOM05D005156 ORTHO05D006710 6.7e-132 474.6 340 71.5
Cpa.g.sc84.13 Carica papaya HOM05D005156 ORTHO05D006710 1.1e-131 473.8 338 74.0
Prupe.4G258300 Prunus persica HOM05D005156 ORTHO05D006710 1.1e-131 473.8 341 73.0
FAN16G2156 Fragaria x ananassa HOM05D005156 ORTHO05D006710 1.5e-131 473.4 343 71.7
Haze_23195 Corylus avellana HOM05D005156 ORTHO05D006710 2.0e-131 473.0 345 73.9
Sc16g0011170 Simmondsia chinensis HOM05D005156 ORTHO05D006710 2.0e-131 473.0 348 73.0
arahy.Tifrunner.gnm1.ann1.9TL5ZW Arachis hypogaea HOM05D005156 ORTHO05D006710 2.6e-131 472.6 342 76.9
Eucgr.J00726 Eucalyptus grandis HOM05D005156 ORTHO05D006710 2.6e-131 472.6 337 73.0
Gorai.001G136000 Gossypium raimondii HOM05D005156 ORTHO05D006710 4.4e-131 471.9 335 74.9
Gohir.D07G126000 Gossypium hirsutum HOM05D005156 ORTHO05D006710 1.7e-130 469.9 335 74.6
CANSAT54G2883 Cannabis sativa HOM05D005156 ORTHO05D006710 2.8e-130 469.2 339 73.7
PSO210G0499 Papaver somniferum HOM05D005156 ORTHO05D006710 3.7e-130 468.8 338 73.7
Gohir.A07G121700 Gossypium hirsutum HOM05D005156 ORTHO05D006710 6.3e-130 468.0 335 74.9
Oeu001490.1 Olea europaea HOM05D005156 ORTHO05D006710 6.3e-130 468.0 340 73.2
Migut.D00644 Erythranthe guttata HOM05D005156 ORTHO05D006710 1.1e-129 467.2 340 74.4
FvH4_3g28170 Fragaria vesca HOM05D005156 ORTHO05D006710 1.8e-129 466.5 343 72.0
Thecc.09G243300 Theobroma cacao HOM05D005156 ORTHO05D006710 1.8e-129 466.5 329 74.5
QL01p017825 Quercus lobata HOM05D005156 ORTHO05D006710 7.0e-129 464.5 342 71.9
THA.LOC104804468 Tarenaya hassleriana HOM05D005156 ORTHO05D006710 2.7e-128 462.6 335 73.4
Nitab4.5_0006419g0030 Nicotiana tabacum HOM05D005156 ORTHO05D006710 2.2e-127 459.5 347 70.9
AL1G58170 Arabidopsis lyrata HOM05D005156 ORTHO05D006710 5.0e-127 458.4 335 72.2
BcaC05g27410 Brassica carinata HOM05D005156 ORTHO05D006710 5.0e-127 458.4 336 72.6
BcaB02g11155 Brassica carinata HOM05D005156 ORTHO05D006710 1.9e-126 456.4 332 72.6
A05p20090 Brassica napus HOM05D005156 ORTHO05D006710 5.5e-126 454.9 337 71.8
BraA05t20917Z Brassica rapa HOM05D005156 ORTHO05D006710 5.5e-126 454.9 337 71.8
Thhalv10011639m.g Eutrema salsugineum HOM05D005156 ORTHO05D006710 5.5e-126 454.9 337 71.2
Carub.0001s3958 Capsella rubella HOM05D005156 ORTHO05D006710 7.2e-126 454.5 335 71.6
AT1G50510 Arabidopsis thaliana HOM05D005156 ORTHO05D006710 3.6e-125 452.2 337 71.5
CARHR040540 Cardamine hirsuta HOM05D005156 ORTHO05D006710 3.6e-125 452.2 335 71.3
Sopen11g015730 Solanum pennellii HOM05D005156 ORTHO05D006710 3.6e-125 452.2 339 71.1
PGSC0003DMG400019760 Solanum tuberosum HOM05D005156 ORTHO05D006710 3.6e-125 452.2 338 71.6
C05p33580 Brassica napus HOM05D005156 ORTHO05D006710 1.8e-124 449.9 338 71.6
Solyc11g033260.2 Solanum lycopersicum HOM05D005156 ORTHO05D006710 2.3e-124 449.5 337 70.6
PGR119G1881 Punica granatum HOM05D005156 ORTHO05D006710 3.0e-124 449.1 341 69.5
EL10Ac4g10175 Beta vulgaris HOM05D005156 ORTHO05D006710 1.2e-123 447.2 334 69.5
BcaB07g33488 Brassica carinata HOM05D005156 ORTHO05D006710 2.0e-123 446.4 335 70.4
MELO3C015153.2 Cucumis melo HOM05D005156 ORTHO05D006710 2.6e-123 446.0 320 74.1
CAN.G1323.2 Capsicum annuum HOM05D005156 ORTHO05D006710 4.4e-123 445.3 337 70.3
BcaC08g43222 Brassica carinata HOM05D005156 ORTHO05D006710 5.7e-123 444.9 335 69.6
Ah.06g194400 Amaranthus hybridus HOM05D005156 ORTHO05D006710 9.8e-123 444.1 337 68.8
Manes.15G112800 Manihot esculenta HOM05D005156 ORTHO05D006710 1.7e-122 443.4 274 82.5
Peaxi162Scf00473g00218 Petunia axillaris HOM05D005156 ORTHO05D006710 1.7e-122 443.4 370 66.5
AUR62000172 Chenopodium quinoa HOM05D005156 ORTHO05D006710 2.2e-122 443.0 337 69.7
HPP92_001936 Vanilla planifolia HOM05D005156 ORTHO05D006710 3.7e-122 442.2 300 75.0
BraA06t23519Z Brassica rapa HOM05D005156 ORTHO05D006710 4.8e-122 441.8 337 69.4
FAN21G2369 Fragaria x ananassa HOM05D005156 ORTHO05D006710 8.3e-122 441.0 343 67.9
Rhsim13G0216600 Rhododendron simsii HOM05D005156 ORTHO05D006710 2.4e-121 439.5 360 68.1
ECA238G2265 Erigeron canadensis HOM05D005156 ORTHO05D006710 3.1e-121 439.1 339 66.1
ATR0751G133 Amborella trichopoda HOM05D005156 ORTHO05D006710 9.1e-121 437.6 308 74.7
Sp1g37360 Schrenkiella parvula HOM05D005156 ORTHO05D006710 9.1e-121 437.6 335 69.9
FAN25G0057 Fragaria x ananassa HOM05D005156 ORTHO05D006710 2.7e-120 436.0 341 67.4
unitig_90.g27461 Utricularia gibba HOM05D005156 ORTHO05D006710 1.3e-119 433.7 339 68.7
Cc01_g05890 Coffea canephora HOM05D005156 ORTHO05D006710 2.9e-119 432.6 318 71.4
FAN11G0102 Fragaria x ananassa HOM05D005156 ORTHO05D006710 3.8e-119 432.2 343 67.9
Sed0002302 Sechium edule HOM05D005156 ORTHO05D006710 1.9e-118 429.9 337 70.0
AUR62039839 Chenopodium quinoa HOM05D005156 ORTHO05D006710 5.5e-118 428.3 367 64.0
ClCG03G012920 Citrullus lanatus HOM05D005156 ORTHO05D006710 7.2e-118 427.9 356 66.9
Sabra16G0154700 Salix brachista HOM05D005156 ORTHO05D006710 1.6e-117 426.8 317 73.8
BolC5t32085H Brassica oleracea HOM05D005156 ORTHO05D006710 2.1e-117 426.4 366 65.0
SMO147G0151 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.8e-116 423.3 331 68.0
Hund21990 Selenicereus undatus HOM05D005156 ORTHO05D006710 5.2e-116 421.8 352 66.5
vmacro04002 Vaccinium macrocarpon HOM05D005156 ORTHO05D006710 6.8e-116 421.4 408 61.0
Mapoly0048s0046 Marchantia polymorpha HOM05D005156 ORTHO05D006710 2.0e-115 419.9 331 65.6
Lsat_1_v5_gn_2_29420 Lactuca sativa HOM05D005156 ORTHO05D006710 5.7e-115 418.3 348 64.7
A06p03060 Brassica napus HOM05D005156 ORTHO05D006710 2.4e-113 412.9 315 69.2
HanXRQChr06g0183211 Helianthus annuus HOM05D005156 ORTHO05D006710 5.4e-113 411.8 312 67.6
C06p05700 Brassica napus HOM05D005156 ORTHO05D006710 7.0e-113 411.4 326 67.5
Nitab4.5_0002113g0190 Nicotiana tabacum HOM05D005156 ORTHO05D006710 1.6e-112 410.2 276 76.4
CDE12G0606 Ceratophyllum demersum HOM05D005156 ORTHO05D006710 1.1e-110 404.1 266 77.4
Aa31LG10G3780 Aethionema arabicum HOM05D005156 ORTHO05D006710 1.2e-109 400.6 302 70.5
Os08g0504400 Oryza sativa ssp. japonica HOM05D005156 ORTHO05D006710 4.0e-108 395.6 300 69.3
Pp3c21_8650 Physcomitrium patens HOM05D005156 ORTHO05D006710 8.9e-108 394.4 341 61.0
CBR_g12801 Chara braunii HOM05D005156 ORTHO05D006710 6.4e-106 388.3 303 66.7
Medtr4g031220 Medicago truncatula HOM05D005156 ORTHO05D006710 6.4e-106 388.3 231 89.2
AagrBONN_evm.TU.Sc2ySwM_368.760 Anthoceros agrestis HOM05D005156 ORTHO05D006710 3.2e-105 386.0 306 67.0
Lj2C655T2 Lonicera japonica HOM05D005156 ORTHO05D006710 2.0e-104 383.3 312 67.9
Dinv22149 Davidia involucrata HOM05D005156 ORTHO05D006710 4.6e-104 382.1 247 80.6
Aqoxy4G00402 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 9.5e-102 374.4 338 63.0
DCAR_002091 Daucus carota HOM05D005156 ORTHO05D006710 5.2e-100 368.6 305 65.9
SHI21395 Sapria himalayana HOM05D005156 ORTHO05D006710 3.2e-97 359.4 274 70.1
MCO15G168 Micromonas commoda HOM05D005156 ORTHO05D006710 9.2e-97 357.8 349 56.4
Zm00001eb251060 Zea mays HOM05D005156 ORTHO05D006710 7.8e-96 354.8 250 71.2
PRCOL_00003626 Prasinoderma coloniale HOM05D005156 ORTHO05D006710 3.1e-92 342.8 301 58.8
SGA_v2.0_scaffold29G12276 Striga asiatica HOM05D005156 ORTHO05D006710 7.1e-89 331.6 211 81.0
Hma1.2p1_2309F.1_g319520 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 4.3e-86 322.4 210 79.5
Lj2C684T3 Lonicera japonica HOM05D005156 ORTHO05D006710 1.1e-84 317.8 245 71.0
Cre02.g144000 Chlamydomonas reinhardtii HOM05D005156 ORTHO05D006710 8.9e-84 314.7 274 60.9
MBI15_g27827_MAGBIO Magnolia biondii HOM05D005156 ORTHO05D006710 1.2e-83 314.3 213 78.4
SMO273G0012 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 6.2e-77 292.0 206 71.8
BcaB02g11038 Brassica carinata HOM05D005156 ORTHO05D006710 1.3e-71 274.2 204 73.5
Nn1g08054 Nelumbo nucifera HOM05D005156 ORTHO05D006710 2.9e-66 256.5 169 75.7
BcaB01g01392 Brassica carinata HOM05D005156 ORTHO05D006710 1.4e-65 254.2 203 71.4
Cfa025164 Carpinus fangiana HOM05D005156 ORTHO05D006710 2.1e-61 240.4 306 42.8
Nn1g08053 Nelumbo nucifera HOM05D005156 ORTHO05D006710 4.3e-46 189.5 149 69.8
Haze_26247 Corylus avellana HOM05D005156 ORTHO05D006710 1.7e-42 177.6 276 42.0
COL.COLO4_04116 Corchorus olitorius HOM05D005156 ORTHO05D006710 1.9e-41 174.1 142 67.6
Medtr4g031235 Medicago truncatula HOM05D005156 ORTHO05D006710 3.2e-41 173.3 104 87.5
SMO147G0118 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 1.4e-28 131.3 246 40.7
Aqoxy1G04277 Aquilegia oxysepala HOM05D005156 ORTHO05D006710 1.3e-26 124.8 102 66.7
ATR0585G005 Amborella trichopoda HOM05D005156 ORTHO05D006710 8.5e-26 122.1 90 72.2
EL10Ac8g19800 Beta vulgaris HOM05D005156 ORTHO05D006710 9.4e-25 118.6 110 56.4
Oeu016690.1 Olea europaea HOM05D005156 ORTHO05D006710 1.0e-23 115.2 99 63.6
SalBow6G0988 Salvia bowleyana HOM05D005156 ORTHO05D006710 2.6e-22 110.5 79 69.6
SMO164G0249 Selaginella moellendorffii HOM05D005156 ORTHO05D006710 9.7e-22 108.6 118 56.8
SEGI_37101 Sequoiadendron giganteum HOM05D005156 ORTHO05D006710 2.5e-17 94.0 67 71.6
SMO147G0310 Selaginella moellendorffii HOM05D000066 ORTHO05D373802 9.4e-17 92.0 113 45.1
MELO3C033715.2 Cucumis melo HOM05D005156 ORTHO05D006710 4.7e-16 89.7 61 72.1
MELO3C034160.2 Cucumis melo HOM05D005156 ORTHO05D006710 4.7e-16 89.7 62 72.6
MELO3C034654.2 Cucumis melo HOM05D005156 ORTHO05D006710 6.1e-16 89.4 62 75.8
MELO3C030656.2 Cucumis melo HOM05D005156 ORTHO05D006710 8.0e-16 89.0 62 74.2
EL10Ac3g06833 Beta vulgaris HOM05D005156 ORTHO05D006710 2.3e-15 87.4 81 51.9
EL10Ac2g04378 Beta vulgaris HOM05D005156 ORTHO05D006710 4.0e-15 86.7 84 50.0
MELO3C030457.2 Cucumis melo HOM05D005156 ORTHO05D006710 9.7e-14 82.0 56 76.8
MELO3C016526.2 Cucumis melo HOM05D005156 ORTHO05D006710 1.3e-13 81.6 55 78.2
Hma1.2p1_1115F.1_g258870 Hydrangea macrophylla HOM05D005156 ORTHO05D006710 1.7e-10 71.2 37 81.1
EL10Ac2g02892 Beta vulgaris HOM05D005156 ORTHO05D039042 2.5e-09 67.4 42 71.4
EL10As2g23197 Beta vulgaris HOM05D005156 ORTHO05D039042 9.4e-09 65.5 40 72.5
EL10Ac8g20129 Beta vulgaris HOM05D005156 ORTHO05D000004 1.2e-08 65.1 38 73.7
EL10Ac9g22728 Beta vulgaris HOM05D005156 ORTHO05D000004 1.6e-08 64.7 37 75.7
SMO147G0023 Selaginella moellendorffii HOM05D005156 ORTHO05D376049 8.0e-08 62.4 123 34.1
Rhsim07G0166700 Rhododendron simsii HOM05D005156 ORTHO05D050672 1.4e-07 61.6 69 52.2
Rhsim05G0077000 Rhododendron simsii HOM05D003003 ORTHO05D008343 8.8e-07 58.9 40 75.0
SMO302G0029 Selaginella moellendorffii HOM05D000457 ORTHO05D375819 2.0e-06 57.8 55 60.0


User provided reference genes

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