Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33870 Trifolium pratense HOM05D004719 ORTHO05D005519 1.4e-95 353.2 209 100.0
Psat5g080520 Pisum sativum HOM05D004719 ORTHO05D005519 5.0e-74 281.6 196 86.7
Medtr3g090640 Medicago truncatula HOM05D004719 ORTHO05D005519 1.0e-71 273.9 194 82.5
Lj1g0014949 Lotus japonicus HOM05D004719 ORTHO05D005519 1.2e-67 260.4 197 70.1
Ca_16667_v3 Cicer arietinum L. HOM05D004719 ORTHO05D005519 3.5e-67 258.8 195 80.0
Lalb_Chr23g0271411 Lupinus albus HOM05D004719 ORTHO05D005519 6.4e-61 238.0 199 65.8
arahy.Tifrunner.gnm1.ann1.A0EQPQ Arachis hypogaea HOM05D004719 ORTHO05D005519 4.3e-57 225.3 186 66.1
arahy.Tifrunner.gnm1.ann1.YXX8CM Arachis hypogaea HOM05D004719 ORTHO05D005519 2.1e-56 223.0 186 71.0
Glyma.04G239200 Glycine max HOM05D004719 ORTHO05D005519 8.1e-56 221.1 194 62.4
Glyma.06G124600 Glycine max HOM05D004719 ORTHO05D005519 4.0e-55 218.8 194 62.4
Phvul.009G136700 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 3.4e-54 215.7 194 61.3
Dinv35299 Davidia involucrata HOM05D004719 ORTHO05D005519 3.2e-52 209.1 205 56.1
Duzib068G0142 Durio zibethinus HOM05D004719 ORTHO05D005519 4.6e-51 205.3 203 54.2
Phvul.008G159900 Phaseolus vulgaris HOM05D004719 ORTHO05D005519 6.0e-51 204.9 200 58.5
Gorai.007G014400 Gossypium raimondii HOM05D004719 ORTHO05D005519 7.8e-51 204.5 207 54.1
Gohir.A11G013800 Gossypium hirsutum HOM05D004719 ORTHO05D005519 1.7e-50 203.4 207 55.1
vmacro10099 Vaccinium macrocarpon HOM05D004719 ORTHO05D005519 2.3e-50 203.0 208 54.3
Duzib084G0320 Durio zibethinus HOM05D004719 ORTHO05D005519 8.6e-50 201.1 210 54.3
Gohir.D11G014000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 7.3e-49 198.0 207 54.1
TWI14G0874 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 1.2e-48 197.2 206 52.9
Haze_00101 Corylus avellana HOM05D004719 ORTHO05D005519 2.1e-48 196.4 223 62.3
Rhsim09G0203300 Rhododendron simsii HOM05D004719 ORTHO05D005519 4.7e-48 195.3 226 51.3
TWI23G0029 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 4.7e-48 195.3 206 52.9
TAR333G0005 Trochodendron aralioides HOM05D004719 ORTHO05D005519 1.1e-47 194.1 207 52.7
Ah.07g206120 Amaranthus hybridus HOM05D004719 ORTHO05D005519 1.4e-47 193.7 208 51.9
QL09p011210 Quercus lobata HOM05D004719 ORTHO05D005519 2.4e-47 193.0 214 57.5
AUR62021055 Chenopodium quinoa HOM05D004719 ORTHO05D005519 4.0e-47 192.2 207 59.9
Thecc.03G191400 Theobroma cacao HOM05D004719 ORTHO05D005519 5.2e-47 191.8 211 51.7
Actinidia31859 Actinidia chinensis HOM05D004719 ORTHO05D005519 8.9e-47 191.0 206 57.3
CiPaw.06G006600 Carya illinoinensis HOM05D004719 ORTHO05D005519 1.5e-46 190.3 193 58.5
AUR62031477 Chenopodium quinoa HOM05D004719 ORTHO05D005519 1.5e-46 190.3 208 58.7
CSS0006896 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 3.4e-46 189.1 209 52.6
CSS0042605 Camellia sinensis var. sinensis HOM05D004719 ORTHO05D005519 3.4e-46 189.1 209 52.6
Cc02_g02010 Coffea canephora HOM05D004719 ORTHO05D005519 3.4e-46 189.1 204 58.3
SalBow4G0130 Salvia bowleyana HOM05D004719 ORTHO05D005519 3.4e-46 189.1 217 48.4
Cfa016352 Carpinus fangiana HOM05D004719 ORTHO05D005519 4.4e-46 188.7 216 59.3
MSTRG.8686 Avicennia marina HOM05D004719 ORTHO05D005519 5.8e-46 188.3 217 50.2
Hma1.2p1_1891F.1_g306690 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 7.6e-46 188.0 209 52.2
Lsat_1_v5_gn_2_134381 Lactuca sativa HOM05D004719 ORTHO05D005519 1.3e-45 187.2 211 50.2
SalBow4G0254 Salvia bowleyana HOM05D004719 ORTHO05D005519 2.9e-45 186.0 217 47.9
Sed0016292 Sechium edule HOM05D004719 ORTHO05D005519 2.9e-45 186.0 200 52.5
Atru.chr1.287 Acer truncatum HOM05D004719 ORTHO05D005519 3.8e-45 185.7 214 56.1
SGA_v2.0_scaffold192G40593 Striga asiatica HOM05D004719 ORTHO05D005519 3.8e-45 185.7 219 48.9
CANSAT21G2536 Cannabis sativa HOM05D004719 ORTHO05D005519 8.4e-45 184.5 194 57.7
TAR374G0131 Trochodendron aralioides HOM05D004719 ORTHO05D005519 8.4e-45 184.5 170 57.6
VMungo1309G2489 Vigna mungo HOM05D004719 ORTHO05D005519 8.4e-45 184.5 228 50.0
CAN.G204.6 Capsicum annuum HOM05D004719 ORTHO05D005519 1.1e-44 184.1 131 65.6
MD01G1213900 Malus domestica HOM05D004719 ORTHO05D005519 1.9e-44 183.3 218 52.3
Potri.012G033300 Populus trichocarpa HOM05D004719 ORTHO05D005519 2.4e-44 183.0 208 49.0
TWI39G0409 Tripterygium wilfordii HOM05D004719 ORTHO05D005519 2.4e-44 183.0 206 50.5
Eucgr.A02672 Eucalyptus grandis HOM05D004719 ORTHO05D005519 4.2e-44 182.2 166 55.4
Nn7g37372 Nelumbo nucifera HOM05D004719 ORTHO05D005519 4.2e-44 182.2 207 50.2
VMungo0647G2259 Vigna mungo HOM05D004719 ORTHO05D005519 4.2e-44 182.2 115 77.4
EL10Ac3g05361 Beta vulgaris HOM05D004719 ORTHO05D005519 7.1e-44 181.4 212 52.4
Ciclev10005830m.g Citrus clementina HOM05D004719 ORTHO05D005519 7.1e-44 181.4 209 51.7
HanXRQChr14g0462731 Helianthus annuus HOM05D004719 ORTHO05D005519 7.1e-44 181.4 180 61.1
THA.LOC104800282 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 7.1e-44 181.4 131 64.9
Hma1.2p1_0327F.1_g126670 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 9.2e-44 181.0 207 51.7
BcaNung06632 Brassica carinata HOM05D004719 ORTHO05D005519 1.2e-43 180.6 199 51.8
C03p17720 Brassica napus HOM05D004719 ORTHO05D005519 1.2e-43 180.6 199 51.8
AL8G28040 Arabidopsis lyrata HOM05D004719 ORTHO05D005519 1.6e-43 180.3 205 52.2
Hma1.2p1_0142F.1_g064100 Hydrangea macrophylla HOM05D004719 ORTHO05D005519 1.6e-43 180.3 229 48.5
MELO3C005862.2 Cucumis melo HOM05D004719 ORTHO05D005519 2.1e-43 179.9 208 57.7
PSO170G2586 Papaver somniferum HOM05D004719 ORTHO05D005519 2.1e-43 179.9 205 50.7
MD07G1283600 Malus domestica HOM05D004719 ORTHO05D005519 2.7e-43 179.5 216 48.6
Oeu049096.1 Olea europaea HOM05D004719 ORTHO05D005519 2.7e-43 179.5 204 50.5
Aa31LG3G9210 Aethionema arabicum HOM05D004719 ORTHO05D005519 3.5e-43 179.1 210 48.6
Manes.06G156000 Manihot esculenta HOM05D004719 ORTHO05D005519 3.5e-43 179.1 189 52.9
PSO063G4149 Papaver somniferum HOM05D004719 ORTHO05D005519 4.6e-43 178.7 203 50.7
CsaV3_5G000780 Cucumis sativus L. HOM05D004719 ORTHO05D005519 7.8e-43 177.9 131 65.6
Nn1g01780 Nelumbo nucifera HOM05D004719 ORTHO05D005519 7.8e-43 177.9 205 51.7
A03p15190 Brassica napus HOM05D004719 ORTHO05D005519 1.0e-42 177.6 204 51.0
Sed0024250 Sechium edule HOM05D004719 ORTHO05D005519 1.0e-42 177.6 206 56.3
Aqoxy5G04028 Aquilegia oxysepala HOM05D004719 ORTHO05D005519 1.3e-42 177.2 206 55.8
BraA03t10813Z Brassica rapa HOM05D004719 ORTHO05D005519 1.7e-42 176.8 204 50.5
BcaC01g06246 Brassica carinata HOM05D004719 ORTHO05D005519 2.3e-42 176.4 179 53.1
COL.COLO4_08254 Corchorus olitorius HOM05D004719 ORTHO05D005519 3.9e-42 175.6 134 61.9
DCAR_020296 Daucus carota HOM05D004719 ORTHO05D005519 3.9e-42 175.6 194 47.9
Duzib205G0172 Durio zibethinus HOM05D004719 ORTHO05D005519 5.1e-42 175.3 209 48.8
ECA238G1719 Erigeron canadensis HOM05D000316 ORTHO05D001978 8.7e-42 174.5 197 48.2
PGSC0003DMG400009067 Solanum tuberosum HOM05D004719 ORTHO05D005519 8.7e-42 174.5 213 46.9
BolC3t14182H Brassica oleracea HOM05D004719 ORTHO05D005519 1.9e-41 173.3 211 48.8
ClCG01G000680 Citrullus lanatus HOM05D004719 ORTHO05D005519 1.9e-41 173.3 236 50.8
HanXRQChr07g0207131 Helianthus annuus HOM05D004719 ORTHO05D005519 1.9e-41 173.3 177 52.5
Peaxi162Scf00618g00530 Petunia axillaris HOM05D004719 ORTHO05D005519 2.5e-41 172.9 131 64.1
Oeu009271.1 Olea europaea HOM05D004719 ORTHO05D005519 5.6e-41 171.8 215 45.6
Cpa.g.sc3.37 Carica papaya HOM05D004719 ORTHO05D005519 7.3e-41 171.4 210 52.9
THA.LOC104811935 Tarenaya hassleriana HOM05D004719 ORTHO05D005519 7.3e-41 171.4 211 55.9
Sc13g0009490 Simmondsia chinensis HOM05D004719 ORTHO05D005519 9.6e-41 171.0 131 61.1
Potri.015G023600 Populus trichocarpa HOM05D004719 ORTHO05D005519 1.3e-40 170.6 132 64.4
Carub.0008s1351 Capsella rubella HOM05D004719 ORTHO05D005519 1.6e-40 170.2 213 53.5
Sp6g15480 Schrenkiella parvula HOM05D004719 ORTHO05D005519 3.6e-40 169.1 212 49.1
PGSC0003DMG400028901 Solanum tuberosum HOM05D004719 ORTHO05D005519 6.2e-40 168.3 193 47.2
AT5G53330 Arabidopsis thaliana HOM05D004719 ORTHO05D005519 8.1e-40 167.9 208 47.6
FAN06G4721 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.4e-39 167.2 216 46.3
CARHR266390 Cardamine hirsuta HOM05D004719 ORTHO05D005519 3.1e-39 166.0 211 51.2
FAN03G2418 Fragaria x ananassa HOM05D004719 ORTHO05D005519 3.1e-39 166.0 218 45.4
Prupe.2G306000 Prunus persica HOM05D004719 ORTHO05D005519 4.0e-39 165.6 213 47.4
PGR042G1451 Punica granatum HOM05D004719 ORTHO05D005519 5.3e-39 165.2 204 47.1
Thhalv10014603m.g Eutrema salsugineum HOM05D004719 ORTHO05D005519 1.2e-38 164.1 210 47.1
PGR142G1718 Punica granatum HOM05D004719 ORTHO05D005519 1.2e-38 164.1 199 49.2
FvH4_7g30890 Fragaria vesca HOM05D004719 ORTHO05D005519 2.6e-38 162.9 218 44.5
FAN01G1522 Fragaria x ananassa HOM05D004719 ORTHO05D005519 3.4e-38 162.5 223 43.9
FAN10G3127 Fragaria x ananassa HOM05D004719 ORTHO05D005519 4.4e-38 162.2 217 44.7
RcHm_v2.0_Chr1g0379961 Rosa chinensis HOM05D004719 ORTHO05D005519 7.6e-38 161.4 219 42.5
Solyc03g007520.3 Solanum lycopersicum HOM05D004719 ORTHO05D005519 7.6e-38 161.4 201 46.8
unitig_747.g21854 Utricularia gibba HOM05D004719 ORTHO05D005519 1.3e-37 160.6 204 44.1
Sopen03g003480 Solanum pennellii HOM05D004719 ORTHO05D005519 1.7e-37 160.2 201 46.3
BcaB08g35695 Brassica carinata HOM05D004719 ORTHO05D005519 2.2e-37 159.8 201 47.3
CAN.G108.16 Capsicum annuum HOM05D004719 ORTHO05D005519 2.2e-37 159.8 193 45.6
Lj1C1011G7 Lonicera japonica HOM05D004719 ORTHO05D005519 2.2e-37 159.8 114 68.4
Peaxi162Scf00904g00473 Petunia axillaris HOM05D004719 ORTHO05D005519 2.2e-37 159.8 209 44.5
Migut.F00251 Erythranthe guttata HOM05D004719 ORTHO05D005519 4.9e-37 158.7 216 47.7
BcaC04g20465 Brassica carinata HOM05D004719 ORTHO05D005519 1.4e-36 157.1 130 59.2
MSTRG.27052 Avicennia marina HOM05D004719 ORTHO05D005519 3.2e-36 156.0 220 42.3
BraA10t43168Z Brassica rapa HOM05D004719 ORTHO05D005519 3.2e-36 156.0 198 46.0
Nitab4.5_0001331g0150 Nicotiana tabacum HOM05D004719 ORTHO05D005519 3.2e-36 156.0 213 43.7
BcaNung07347 Brassica carinata HOM05D004719 ORTHO05D005519 7.1e-36 154.8 140 55.7
Nitab4.5_0000472g0190 Nicotiana tabacum HOM05D004719 ORTHO05D005519 7.1e-36 154.8 213 43.7
Zm00001eb376120 Zea mays HOM05D004719 ORTHO05D005519 7.1e-36 154.8 136 58.8
A10p10840 Brassica napus HOM05D004719 ORTHO05D005519 9.3e-36 154.5 196 46.9
Manes.14G019414 Manihot esculenta HOM05D004719 ORTHO05D005519 2.1e-35 153.3 178 50.6
C09p43180 Brassica napus HOM05D004719 ORTHO05D005519 2.7e-35 152.9 207 44.4
Os06g0160400 Oryza sativa ssp. japonica HOM05D004719 ORTHO05D005519 2.7e-35 152.9 139 56.1
ATR0661G055 Amborella trichopoda HOM05D004719 ORTHO05D005519 4.6e-35 152.1 207 44.0
CDE08G1019 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 7.8e-35 151.4 208 43.8
HPP92_008641 Vanilla planifolia HOM05D004719 ORTHO05D005519 7.8e-35 151.4 131 55.7
BolC9t57191H Brassica oleracea HOM05D004719 ORTHO05D005519 3.0e-34 149.4 213 43.7
Actinidia34185 Actinidia chinensis HOM05D004719 ORTHO05D005519 3.9e-34 149.1 131 58.0
GSVIVG01028725001 Vitis vinifera HOM05D004719 ORTHO05D005519 5.6e-33 145.2 103 68.0
Gohir.A09G183300 Gossypium hirsutum HOM05D004719 ORTHO05D005519 3.6e-32 142.5 188 45.7
Gohir.D09G178000 Gossypium hirsutum HOM05D004719 ORTHO05D005519 4.8e-32 142.1 188 45.7
PGR142G4196 Punica granatum HOM05D004719 ORTHO05D005519 4.8e-32 142.1 200 45.5
Gorai.006G200100 Gossypium raimondii HOM05D004719 ORTHO05D005519 1.1e-31 141.0 187 46.0
FAN06G1194 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.5e-30 137.1 125 55.2
MBI06_g04286_MAGBIO Magnolia biondii HOM05D004719 ORTHO05D005519 3.4e-30 136.0 204 42.6
CDE02G1124 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 4.5e-30 135.6 208 40.4
Mapoly0050s0076 Marchantia polymorpha HOM05D004719 ORTHO05D005519 2.1e-24 116.7 195 40.0
SEGI_18632 Sequoiadendron giganteum HOM05D004719 ORTHO05D005519 3.7e-24 115.9 160 51.2
BcaC01g06237 Brassica carinata HOM05D001465 ORTHO05D001434 1.1e-20 104.4 153 46.4
AagrBONN_evm.TU.Sc2ySwM_340.345 Anthoceros agrestis HOM05D004719 ORTHO05D005519 5.5e-20 102.1 201 34.8
Dinv28349 Davidia involucrata HOM05D004719 ORTHO05D005519 1.3e-18 97.4 68 66.2
Pp3c1_11420 Physcomitrium patens HOM05D004719 ORTHO05D005519 3.9e-18 95.9 202 34.7
FAN18G3526 Fragaria x ananassa HOM05D006854 ORTHO05D210570 6.2e-16 88.6 57 66.7
C03p17810 Brassica napus HOM05D004719 ORTHO05D005519 1.1e-15 87.8 183 38.3
QL04p064474 Quercus lobata HOM05D000013 ORTHO05D000011 1.7e-13 80.5 51 68.6
BolC3t14188H Brassica oleracea HOM05D004719 ORTHO05D005519 5.0e-13 79.0 95 49.5
FvH4_7g16570 Fragaria vesca HOM05D004719 ORTHO05D005519 6.5e-13 78.6 51 66.7
FAN01G1848 Fragaria x ananassa HOM05D002077 ORTHO05D000818 1.1e-12 77.8 49 71.4
Solyc06g036500.1 Solanum lycopersicum HOM05D004719 ORTHO05D005519 7.1e-12 75.1 67 53.7
FvH4_6g34200 Fragaria vesca HOM05D004719 ORTHO05D005519 1.0e-10 71.2 73 49.3
FAN16G3662 Fragaria x ananassa HOM05D004719 ORTHO05D005519 7.4e-09 65.1 36 75.0
Sopen06g012490 Solanum pennellii HOM05D004719 ORTHO05D005519 1.8e-07 60.5 66 45.5
CDE09G0250 Ceratophyllum demersum HOM05D004719 ORTHO05D005519 1.5e-06 57.4 46 54.3
FAN06G3132 Fragaria x ananassa HOM05D004719 ORTHO05D005519 1.0e-05 54.7 42 57.1


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