Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33684 Trifolium pratense HOM05D001879 ORTHO05D007957 0.0e+00 1539.2 900 100.0
Psat0s3943g0040 Pisum sativum HOM05D001879 ORTHO05D007957 0.0e+00 1299.3 900 78.6
Medtr3g103040 Medicago truncatula HOM05D001879 ORTHO05D007957 0.0e+00 1254.2 917 76.7
Ca_15906_v3 Cicer arietinum L. HOM05D001879 ORTHO05D007957 0.0e+00 1218.4 905 74.3
Lj1g0023876 Lotus japonicus HOM05D001879 ORTHO05D007957 0.0e+00 1080.1 911 66.8
Glyma.04G045100 Glycine max HOM05D001879 ORTHO05D007957 2.1e-310 1068.9 917 66.4
VMungo1309G0716 Vigna mungo HOM05D001879 ORTHO05D007957 1.2e-305 1053.1 910 65.4
Phvul.009G071000 Phaseolus vulgaris HOM05D001879 ORTHO05D007957 1.6e-305 1052.7 911 65.1
Lalb_Chr11g0062861 Lupinus albus HOM05D001879 ORTHO05D007957 4.8e-299 1031.2 838 68.0
Glyma.06G045600 Glycine max HOM05D001879 ORTHO05D007957 2.4e-298 1028.9 909 65.6
arahy.Tifrunner.gnm1.ann1.0Z12M9 Arachis hypogaea HOM05D001879 ORTHO05D007957 1.7e-288 996.1 922 62.9
arahy.Tifrunner.gnm1.ann1.D4I9HU Arachis hypogaea HOM05D001879 ORTHO05D007957 1.6e-286 989.6 918 62.4
Cfa013682 Carpinus fangiana HOM05D001879 ORTHO05D007957 6.2e-254 881.3 945 56.2
QL12p037915 Quercus lobata HOM05D001879 ORTHO05D007957 4.1e-250 868.6 935 56.6
Dinv44961 Davidia involucrata HOM05D001879 ORTHO05D007957 1.7e-248 863.2 809 60.2
Gorai.002G135500 Gossypium raimondii HOM05D001879 ORTHO05D007957 8.6e-248 860.9 950 54.8
CANSAT11G0135 Cannabis sativa HOM05D001879 ORTHO05D007957 2.1e-246 856.3 932 53.4
Gohir.A01G122900 Gossypium hirsutum HOM05D001879 ORTHO05D007957 1.8e-245 853.2 957 54.8
Gohir.D01G110700 Gossypium hirsutum HOM05D001879 ORTHO05D007957 5.8e-244 848.2 959 55.0
MD15G1071100 Malus domestica HOM05D001879 ORTHO05D007957 9.9e-244 847.4 934 57.0
RcHm_v2.0_Chr6g0309461 Rosa chinensis HOM05D001879 ORTHO05D007957 8.4e-243 844.3 801 58.7
FvH4_2g33210 Fragaria vesca HOM05D001879 ORTHO05D007957 1.4e-242 843.6 935 53.7
FAN15G2911 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.9e-242 843.2 935 53.9
MD08G1085900 Malus domestica HOM05D001879 ORTHO05D007957 6.0e-241 838.2 952 57.2
TWI56G1363 Tripterygium wilfordii HOM05D001879 ORTHO05D007957 2.5e-239 832.8 939 57.2
Potri.014G016900 Populus trichocarpa HOM05D001879 ORTHO05D007957 4.3e-239 832.0 947 52.2
GSVIVG01009355001 Vitis vinifera HOM05D001879 ORTHO05D007957 1.6e-238 830.1 849 56.1
FAN27G1994 Fragaria x ananassa HOM05D001879 ORTHO05D007957 1.4e-237 827.0 930 52.7
Manes.05G181300 Manihot esculenta HOM05D001879 ORTHO05D007957 2.0e-236 823.2 795 57.0
FAN20G0243 Fragaria x ananassa HOM05D001879 ORTHO05D007957 4.5e-236 822.0 936 53.0
Lj4A759G42 Lonicera japonica HOM05D001879 ORTHO05D007957 1.2e-233 813.9 908 52.4
CiPaw.07G175800 Carya illinoinensis HOM05D001879 ORTHO05D007957 2.7e-233 812.8 943 54.4
MELO3C016811.2 Cucumis melo HOM05D001879 ORTHO05D007648 6.0e-233 811.6 931 50.7
Eucgr.F02257 Eucalyptus grandis HOM05D001879 ORTHO05D007957 7.9e-233 811.2 920 53.8
CsaV3_4G035000 Cucumis sativus L. HOM05D001879 ORTHO05D007957 1.0e-232 810.8 933 51.2
FAN24G3463 Fragaria x ananassa HOM05D001879 ORTHO05D007957 5.1e-232 808.5 981 54.2
Actinidia38101 Actinidia chinensis HOM05D001879 ORTHO05D007957 1.1e-231 807.4 847 53.4
Hma1.2p1_0210F.1_g089520 Hydrangea macrophylla HOM05D001879 ORTHO05D007957 1.9e-231 806.6 848 55.4
ClCG05G020560 Citrullus lanatus HOM05D001879 ORTHO05D007957 1.1e-229 800.8 963 49.7
COL.COLO4_28516 Corchorus olitorius HOM05D001879 ORTHO05D007957 1.5e-228 797.0 788 57.1
Actinidia08249 Actinidia chinensis HOM05D001879 ORTHO05D007957 5.8e-228 795.0 819 55.7
Sabra14G0010700 Salix brachista HOM05D001879 ORTHO05D007957 1.3e-227 793.9 959 49.5
Prupe.1G423800 Prunus persica HOM05D001879 ORTHO05D007957 2.9e-227 792.7 934 51.9
Cc10_g05700 Coffea canephora HOM05D001879 ORTHO05D007957 9.3e-226 787.7 869 53.0
Nitab4.5_0003803g0010 Nicotiana tabacum HOM05D001879 ORTHO05D007957 1.2e-225 787.3 913 50.4
PGR031G1956 Punica granatum HOM05D001879 ORTHO05D007957 3.0e-224 782.7 935 50.8
HanXRQChr01g0027941 Helianthus annuus HOM05D001879 ORTHO05D007957 3.1e-221 772.7 909 53.9
CAN.G724.12 Capsicum annuum HOM05D001879 ORTHO05D007957 5.3e-221 771.9 808 54.1
Cpa.g.sc142.17 Carica papaya HOM05D001879 ORTHO05D007957 4.5e-220 768.8 932 53.4
Nitab4.5_0000164g0140 Nicotiana tabacum HOM05D001879 ORTHO05D007957 3.8e-219 765.8 935 49.4
Solyc04g077930.4 Solanum lycopersicum HOM05D001879 ORTHO05D007957 4.9e-219 765.4 935 54.4
Sopen04g031530 Solanum pennellii HOM05D001879 ORTHO05D007957 1.6e-217 760.4 935 54.2
vmacro22058 Vaccinium macrocarpon HOM05D001879 ORTHO05D007957 6.0e-217 758.4 947 48.9
EL10Ac1g02390 Beta vulgaris HOM05D001879 ORTHO05D007957 2.1e-214 750.0 923 47.3
Migut.N02775 Erythranthe guttata HOM05D001879 ORTHO05D007957 1.0e-211 741.1 807 52.5
THA.LOC104812592 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 1.9e-207 726.9 743 52.6
Aqoxy6G02668 Aquilegia oxysepala HOM05D001879 ORTHO05D007957 2.2e-206 723.4 861 49.2
AL1G41290 Arabidopsis lyrata HOM05D001879 ORTHO05D007957 2.4e-205 719.9 846 50.6
Ciclev10003334m.g Citrus clementina HOM05D001879 ORTHO05D007648 6.9e-205 718.4 870 49.2
Hund05306 Selenicereus undatus HOM05D001879 ORTHO05D007957 9.1e-205 718.0 978 45.0
AT1G27752 Arabidopsis thaliana HOM05D001879 ORTHO05D007957 1.2e-204 717.6 853 50.2
Oeu057374.1 Olea europaea HOM05D001879 ORTHO05D007957 1.5e-204 717.2 835 52.8
THA.LOC104820515 Tarenaya hassleriana HOM05D001879 ORTHO05D007957 1.3e-203 714.1 843 50.2
Ah.05g167110 Amaranthus hybridus HOM05D001879 ORTHO05D007957 8.5e-203 711.4 934 46.5
Sc26g0004180 Simmondsia chinensis HOM05D001879 ORTHO05D007957 8.5e-203 711.4 919 46.6
PSO675G4263 Papaver somniferum HOM05D001879 ORTHO05D007957 1.1e-202 711.1 846 51.1
Thhalv10006764m.g Eutrema salsugineum HOM05D001879 ORTHO05D007957 1.4e-202 710.7 802 50.5
ECA246G2822 Erigeron canadensis HOM05D001879 ORTHO05D007957 4.2e-202 709.1 753 52.5
Sp1g23990 Schrenkiella parvula HOM05D001879 ORTHO05D007957 7.2e-202 708.4 831 50.3
SalBow6G3417 Salvia bowleyana HOM05D001879 ORTHO05D007957 1.2e-201 707.6 807 51.2
Aa31sc113G40 Aethionema arabicum HOM05D001879 ORTHO05D007957 4.6e-201 705.7 836 49.8
A08p26070 Brassica napus HOM05D001879 ORTHO05D007957 6.1e-201 705.3 780 52.6
C03p74580 Brassica napus HOM05D001879 ORTHO05D007957 1.0e-200 704.5 787 51.0
BraA08t34557Z Brassica rapa HOM05D001879 ORTHO05D007957 1.0e-200 704.5 780 52.6
PSO541G1802 Papaver somniferum HOM05D001879 ORTHO05D007957 1.0e-200 704.5 793 51.8
Carub.0001s2627 Capsella rubella HOM05D001879 ORTHO05D007957 1.4e-200 704.1 803 51.3
AUR62037429 Chenopodium quinoa HOM05D001879 ORTHO05D007957 2.3e-200 703.4 825 48.6
BolC3t19706H Brassica oleracea HOM05D001879 ORTHO05D007957 5.1e-200 702.2 827 49.8
Nn1g04585 Nelumbo nucifera HOM05D001879 ORTHO05D007957 2.8e-198 696.4 926 48.2
AUR62038791 Chenopodium quinoa HOM05D001879 ORTHO05D007957 4.8e-198 695.7 936 45.3
SGA_v2.0_scaffold152G36803 Striga asiatica HOM05D001879 ORTHO05D007957 1.3e-195 687.6 809 50.6
CDE02G0795 Ceratophyllum demersum HOM05D001879 ORTHO05D007957 4.7e-193 679.1 730 51.6
BcaC01g01572 Brassica carinata HOM05D001879 ORTHO05D007957 2.2e-187 660.2 827 48.6
ATR0208G030 Amborella trichopoda HOM05D001879 ORTHO05D007957 8.0e-185 651.7 905 44.9
SalBow8G5177 Salvia bowleyana HOM05D001879 ORTHO05D007957 1.3e-179 634.4 786 48.5
Thecc.08G089900 Theobroma cacao HOM05D001879 ORTHO05D007957 3.7e-174 616.3 724 54.4
PGSC0003DMG400021524 Solanum tuberosum HOM05D001879 ORTHO05D007957 1.6e-172 610.9 647 53.3
Zm00001eb007600 Zea mays HOM05D001879 ORTHO05D007957 2.7e-172 610.1 826 44.8
Sed0020869 Sechium edule HOM05D001879 ORTHO05D007957 7.7e-172 608.6 742 49.2
Os03g0205000 Oryza sativa ssp. japonica HOM05D001879 ORTHO05D007957 8.8e-168 595.1 887 46.6
unitig_578.g16146 Utricularia gibba HOM05D001879 ORTHO05D007957 1.2e-164 584.7 806 44.3
Atru.chr13.820 Acer truncatum HOM05D001879 ORTHO05D007648 1.0e-160 571.6 487 61.0
HPP92_009537 Vanilla planifolia HOM05D001879 ORTHO05D007957 2.6e-159 567.0 790 43.9
Lsat_1_v5_gn_6_112340 Lactuca sativa HOM05D001879 ORTHO05D007957 6.8e-152 542.3 915 40.7
TAR381G0637 Trochodendron aralioides HOM05D001879 ORTHO05D007957 3.3e-146 523.5 480 59.4
CSS0023334 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 6.2e-145 519.2 412 64.6
CARHR027270 Cardamine hirsuta HOM05D001879 ORTHO05D007957 1.2e-143 515.0 588 49.8
Haze_22326 Corylus avellana HOM05D001879 ORTHO05D007957 2.4e-141 507.3 505 56.4
DCAR_009884 Daucus carota HOM05D001879 ORTHO05D007957 1.7e-131 474.6 825 40.6
Peaxi162Scf00081g00176 Petunia axillaris HOM05D001879 ORTHO05D007957 3.2e-125 453.8 549 49.7
MD03G1160700 Malus domestica HOM05D001879 ORTHO05D007957 7.1e-125 452.6 407 58.2
Mapoly0067s0042 Marchantia polymorpha HOM05D001879 ORTHO05D007957 4.1e-96 357.1 639 35.8
CANSAT25G3038 Cannabis sativa HOM05D001879 ORTHO05D007957 7.2e-85 319.7 222 70.7
AagrBONN_evm.TU.Sc2ySwM_362.2893 Anthoceros agrestis HOM05D001879 ORTHO05D007957 1.5e-82 312.0 652 33.3
SHI08396 Sapria himalayana HOM05D001879 ORTHO05D007957 6.9e-80 303.1 495 39.0
SMO347G0602 Selaginella moellendorffii HOM05D001879 ORTHO05D007957 4.2e-77 293.9 708 30.9
Pp3c2_23190 Physcomitrium patens HOM05D001879 ORTHO05D007957 8.0e-76 289.7 600 31.8
TAR381G1515 Trochodendron aralioides HOM05D001879 ORTHO05D007957 2.2e-73 281.6 424 44.6
CBR_g57086 Chara braunii HOM05D001879 ORTHO05D007957 2.0e-66 258.5 628 30.6
Haze_22325 Corylus avellana HOM05D001879 ORTHO05D007957 8.3e-57 226.5 223 57.8
SEGI_28261 Sequoiadendron giganteum HOM05D001879 ORTHO05D007957 1.7e-54 218.8 286 44.4
BraA09t40950Z Brassica rapa HOM05D001879 ORTHO05D007957 1.6e-44 185.7 128 69.5
SHI08398 Sapria himalayana HOM05D001879 ORTHO05D007957 2.6e-34 151.8 219 42.0
Atru.chr13.821 Acer truncatum HOM05D001879 ORTHO05D007957 9.5e-29 133.3 302 43.7
CSS0041216 Camellia sinensis var. sinensis HOM05D001879 ORTHO05D007957 7.5e-26 123.6 98 64.3
HanXRQChr05g0145561 Helianthus annuus HOM05D001879 ORTHO05D007957 1.6e-20 105.9 63 71.4
SHI08400 Sapria himalayana HOM05D001879 ORTHO05D007957 6.6e-14 84.0 122 48.4
Cfa000625 Carpinus fangiana HOM05D001879 ORTHO05D007957 1.5e-13 82.8 139 45.3
HPP92_009536 Vanilla planifolia HOM05D001879 ORTHO05D007957 1.6e-12 79.3 92 48.9
Cre13.g568750 Chlamydomonas reinhardtii HOM05D001879 ORTHO05D007957 2.2e-09 68.9 54 59.3
MCO02G333 Micromonas commoda HOM05D001879 ORTHO05D007957 2.2e-09 68.9 817 22.9
C05p26450 Brassica napus HOM05D001879 ORTHO05D007957 1.9e-08 65.9 86 46.5
BolC5t31366H Brassica oleracea HOM05D001879 ORTHO05D007957 1.9e-08 65.9 86 46.5
AagrBONN_evm.TU.Sc2ySwM_368.1487 Anthoceros agrestis HOM05D001879 ORTHO05D007957 1.2e-07 63.2 65 50.8


User provided reference genes

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