Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G33000 Trifolium pratense HOM05D004811 ORTHO05D006888 3.5e-72 275.0 155 100.0
Psat1g085480 Pisum sativum HOM05D004811 ORTHO05D006888 8.6e-55 217.2 109 92.7
Medtr6g026900 Medicago truncatula HOM05D004811 ORTHO05D006888 1.6e-53 213.0 109 91.7
Ca_04451_v3 Cicer arietinum L. HOM05D004811 ORTHO05D006888 6.2e-53 211.1 114 87.7
arahy.Tifrunner.gnm1.ann1.21VBB5 Arachis hypogaea HOM05D004811 ORTHO05D006888 1.2e-51 206.8 107 88.8
Psat2g043000 Pisum sativum HOM05D004811 ORTHO05D006888 1.2e-51 206.8 106 91.5
Glyma.19G064500 Glycine max HOM05D004811 ORTHO05D006888 2.0e-51 206.1 107 88.8
Lalb_Chr06g0174221 Lupinus albus HOM05D004811 ORTHO05D006888 2.0e-51 206.1 114 83.3
VMungo0464G0703 Vigna mungo HOM05D004811 ORTHO05D006888 1.1e-49 200.3 112 83.9
Cc02_g18400 Coffea canephora HOM05D004811 ORTHO05D006888 1.4e-49 199.9 110 82.7
TWI18G0824 Tripterygium wilfordii HOM05D004811 ORTHO05D006888 1.4e-49 199.9 111 82.9
Duzib106G1219 Durio zibethinus HOM05D004811 ORTHO05D006888 1.9e-49 199.5 108 86.1
Peaxi162Scf00003g01938 Petunia axillaris HOM05D004811 ORTHO05D006888 1.9e-49 199.5 109 83.5
Phvul.004G051000 Phaseolus vulgaris HOM05D004811 ORTHO05D006888 1.9e-49 199.5 107 86.9
GSVIVG01032296001 Vitis vinifera HOM05D004811 ORTHO05D006888 1.9e-49 199.5 113 79.6
Haze_17831 Corylus avellana HOM05D004811 ORTHO05D006888 2.4e-49 199.1 114 79.8
Haze_17837 Corylus avellana HOM05D004811 ORTHO05D006888 2.4e-49 199.1 114 79.8
QL02p036407 Quercus lobata HOM05D004811 ORTHO05D006888 2.4e-49 199.1 107 85.0
QL02p036870 Quercus lobata HOM05D004811 ORTHO05D006888 2.4e-49 199.1 107 85.0
CAN.G606.11 Capsicum annuum HOM05D004811 ORTHO05D006888 3.2e-49 198.7 109 83.5
CiPaw.16G007200 Carya illinoinensis HOM05D004811 ORTHO05D006888 3.2e-49 198.7 114 80.7
Nitab4.5_0009440g0010 Nicotiana tabacum HOM05D004811 ORTHO05D006888 3.2e-49 198.7 109 83.5
Cfa018260 Carpinus fangiana HOM05D004811 ORTHO05D006888 4.2e-49 198.4 114 78.9
COL.COLO4_04346 Corchorus olitorius HOM05D004811 ORTHO05D006888 4.2e-49 198.4 107 86.9
Manes.14G160925 Manihot esculenta HOM05D004811 ORTHO05D006888 4.2e-49 198.4 115 84.3
Nn4g25146 Nelumbo nucifera HOM05D004811 ORTHO05D006888 1.2e-48 196.8 108 85.2
Solyc10g050540.2 Solanum lycopersicum HOM05D004811 ORTHO05D006888 1.2e-48 196.8 109 83.5
Sopen10g022210 Solanum pennellii HOM05D004811 ORTHO05D006888 1.2e-48 196.8 109 83.5
ATR0307G027 Amborella trichopoda HOM05D004811 ORTHO05D006888 1.6e-48 196.4 109 83.5
Dinv04542 Davidia involucrata HOM05D004811 ORTHO05D006888 1.6e-48 196.4 109 82.6
Thecc.10G126600 Theobroma cacao HOM05D004811 ORTHO05D006888 1.6e-48 196.4 108 84.3
Actinidia00514 Actinidia chinensis HOM05D004811 ORTHO05D006888 2.7e-48 195.7 109 81.7
Sabra03G0073000 Salix brachista HOM05D004811 ORTHO05D006888 2.7e-48 195.7 113 79.6
Nitab4.5_0000876g0200 Nicotiana tabacum HOM05D004811 ORTHO05D006888 3.5e-48 195.3 108 83.3
TAR636G1158 Trochodendron aralioides HOM05D004811 ORTHO05D006888 3.5e-48 195.3 112 80.4
CSS0026504 Camellia sinensis var. sinensis HOM05D004811 ORTHO05D006888 6.0e-48 194.5 109 81.7
Oeu013671.1 Olea europaea HOM05D004811 ORTHO05D006888 6.0e-48 194.5 110 80.0
Atru.chr1.2074 Acer truncatum HOM05D004811 ORTHO05D006888 7.8e-48 194.1 110 80.9
Potri.003G106200 Populus trichocarpa HOM05D004811 ORTHO05D006888 7.8e-48 194.1 113 77.9
vmacro02132 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 7.8e-48 194.1 109 81.7
Lsat_1_v5_gn_9_108940 Lactuca sativa HOM05D004811 ORTHO05D006888 1.3e-47 193.4 109 81.7
MBI19_g06604_MAGBIO Magnolia biondii HOM05D004811 ORTHO05D006888 1.3e-47 193.4 112 79.5
Prupe.1G353000 Prunus persica HOM05D004811 ORTHO05D006888 1.7e-47 193.0 107 82.2
ECA240G1163 Erigeron canadensis HOM05D004811 ORTHO05D006888 2.3e-47 192.6 107 83.2
Lj5C205G23 Lonicera japonica HOM05D004811 ORTHO05D006888 2.3e-47 192.6 109 79.8
AL1G30120 Arabidopsis lyrata HOM05D004811 ORTHO05D006888 3.0e-47 192.2 109 80.7
Gohir.A06G170700 Gossypium hirsutum HOM05D004811 ORTHO05D006888 3.0e-47 192.2 108 82.4
Gohir.D06G178500 Gossypium hirsutum HOM05D004811 ORTHO05D006888 3.0e-47 192.2 108 82.4
Gorai.N006700 Gossypium raimondii HOM05D004811 ORTHO05D006888 3.0e-47 192.2 108 82.4
arahy.Tifrunner.gnm1.ann1.BVJW9Q Arachis hypogaea HOM05D004811 ORTHO05D006888 5.1e-47 191.4 126 76.2
MD09G1000100 Malus domestica HOM05D004811 ORTHO05D006888 5.1e-47 191.4 107 82.2
vmacro10447 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 5.1e-47 191.4 109 80.7
Sc16g0003300 Simmondsia chinensis HOM05D004811 ORTHO05D006888 6.6e-47 191.0 107 82.2
Hund15153 Selenicereus undatus HOM05D004811 ORTHO05D006888 8.7e-47 190.7 106 84.0
EL10Ac5g11622 Beta vulgaris HOM05D004811 ORTHO05D006888 1.5e-46 189.9 107 81.3
HanXRQChr03g0072161 Helianthus annuus HOM05D004811 ORTHO05D006888 1.5e-46 189.9 109 80.7
PSO339G3970 Papaver somniferum HOM05D004811 ORTHO05D006888 1.5e-46 189.9 109 78.9
Ciclev10011123m.g Citrus clementina HOM05D004811 ORTHO05D006888 1.9e-46 189.5 111 79.3
Carub.0001s1749 Capsella rubella HOM05D004811 ORTHO05D006888 2.5e-46 189.1 109 79.8
RcHm_v2.0_Chr7g0218051 Rosa chinensis HOM05D004811 ORTHO05D006888 2.5e-46 189.1 109 80.7
THA.LOC104812205 Tarenaya hassleriana HOM05D004811 ORTHO05D006888 2.5e-46 189.1 109 79.8
Aa31LG10G8540 Aethionema arabicum HOM05D004811 ORTHO05D006888 3.3e-46 188.7 109 80.7
CARHR018370 Cardamine hirsuta HOM05D004811 ORTHO05D006888 3.3e-46 188.7 109 78.9
Migut.N01206 Erythranthe guttata HOM05D004811 ORTHO05D006888 4.3e-46 188.3 107 78.5
CsaV3_4G031660 Cucumis sativus L. HOM05D004811 ORTHO05D006888 5.6e-46 188.0 106 78.3
Sed0008285 Sechium edule HOM05D004811 ORTHO05D006888 7.3e-46 187.6 106 77.4
Thhalv10006915m.g Eutrema salsugineum HOM05D004811 ORTHO05D006888 9.6e-46 187.2 109 79.8
PGR044G1247 Punica granatum HOM05D004811 ORTHO05D006888 1.3e-45 186.8 108 79.6
Rhsim11G0174100 Rhododendron simsii HOM05D004811 ORTHO05D006888 1.3e-45 186.8 109 78.9
Sp1g15840 Schrenkiella parvula HOM05D004811 ORTHO05D006888 1.3e-45 186.8 109 78.9
Eucgr.K03557 Eucalyptus grandis HOM05D004811 ORTHO05D006888 2.1e-45 186.0 108 79.6
MELO3C008873.2 Cucumis melo HOM05D004811 ORTHO05D006888 2.8e-45 185.7 106 77.4
Ah.02g115100 Amaranthus hybridus HOM05D004811 ORTHO05D006888 3.6e-45 185.3 107 79.4
BcaC07g38890 Brassica carinata HOM05D004811 ORTHO05D006888 4.8e-45 184.9 109 78.0
A08p30750 Brassica napus HOM05D004811 ORTHO05D006888 4.8e-45 184.9 109 78.0
C08p18170 Brassica napus HOM05D004811 ORTHO05D006888 4.8e-45 184.9 109 78.0
BolC8t49451H Brassica oleracea HOM05D004811 ORTHO05D006888 4.8e-45 184.9 109 78.0
BraA08t35006Z Brassica rapa HOM05D004811 ORTHO05D006888 4.8e-45 184.9 109 78.0
AT1G17760 Arabidopsis thaliana HOM05D004811 ORTHO05D006888 6.2e-45 184.5 109 78.9
MSTRG.5372 Avicennia marina HOM05D004811 ORTHO05D006888 8.1e-45 184.1 107 77.6
DCAR_022066 Daucus carota HOM05D004811 ORTHO05D006888 1.8e-44 183.0 109 76.1
Lj2g0018835 Lotus japonicus HOM05D004811 ORTHO05D006888 3.1e-44 182.2 109 78.9
FvH4_5g27050 Fragaria vesca HOM05D004811 ORTHO05D006888 5.3e-44 181.4 115 76.5
FAN04G3268 Fragaria x ananassa HOM05D004811 ORTHO05D006888 5.3e-44 181.4 115 76.5
FAN08G1445 Fragaria x ananassa HOM05D004811 ORTHO05D006888 5.3e-44 181.4 115 76.5
FAN18G4560 Fragaria x ananassa HOM05D004811 ORTHO05D006888 1.2e-43 180.3 115 75.7
CDE09G0881 Ceratophyllum demersum HOM05D004811 ORTHO05D006888 7.6e-43 177.6 112 72.3
SGA_v2.0_scaffold55G19835 Striga asiatica HOM05D004811 ORTHO05D006888 9.9e-43 177.2 107 72.9
Aqoxy1G00017 Aquilegia oxysepala HOM05D004811 ORTHO05D006888 1.7e-42 176.4 107 75.7
AUR62037093 Chenopodium quinoa HOM05D004811 ORTHO05D006888 1.7e-42 176.4 107 77.6
HPP92_012441 Vanilla planifolia HOM05D004811 ORTHO05D006888 2.2e-42 176.0 107 73.8
HPP92_028180 Vanilla planifolia HOM05D004811 ORTHO05D006888 2.2e-42 176.0 107 73.8
Os12g0571900 Oryza sativa ssp. japonica HOM05D004811 ORTHO05D006888 1.1e-41 173.7 108 72.2
PSO210G7430 Papaver somniferum HOM05D004811 ORTHO05D006888 1.1e-41 173.7 109 73.4
unitig_8.g3575 Utricularia gibba HOM05D004811 ORTHO05D006888 1.9e-41 172.9 113 69.9
PSO210G4088 Papaver somniferum HOM05D004811 ORTHO05D006888 2.4e-41 172.6 109 73.4
Mapoly0001s0525 Marchantia polymorpha HOM05D004811 ORTHO05D006888 7.8e-40 167.5 108 68.5
PSO210G5098 Papaver somniferum HOM05D004811 ORTHO05D006888 3.0e-39 165.6 109 69.7
SEGI_25586 Sequoiadendron giganteum HOM05D004811 ORTHO05D006888 4.5e-35 151.8 109 59.6
PSO384G3007 Papaver somniferum HOM05D004811 ORTHO05D006888 1.1e-33 147.1 109 64.2
Pp3c3_19050 Physcomitrium patens HOM05D004811 ORTHO05D006888 5.4e-33 144.8 109 55.0
RcHm_v2.0_Chr2g0146051 Rosa chinensis HOM05D004811 ORTHO05D006888 3.5e-32 142.1 109 59.6
SMO356G0171 Selaginella moellendorffii HOM05D004811 ORTHO05D006888 1.0e-31 140.6 106 57.5
AUR62036481 Chenopodium quinoa HOM05D004811 ORTHO05D006888 2.3e-31 139.4 107 64.5
FvH4_6g34990 Fragaria vesca HOM05D004811 ORTHO05D006888 2.1e-29 132.9 104 60.6
FAN05G0989 Fragaria x ananassa HOM05D004811 ORTHO05D006888 2.8e-29 132.5 104 60.6
FAN09G3976 Fragaria x ananassa HOM05D004811 ORTHO05D006888 3.7e-29 132.1 104 60.6
CBR_g19801 Chara braunii HOM05D004811 ORTHO05D006888 1.4e-28 130.2 107 53.3
FAN14G1986 Fragaria x ananassa HOM05D004811 ORTHO05D006888 2.4e-28 129.4 104 59.6
AagrBONN_evm.TU.Sc2ySwM_362.2211 Anthoceros agrestis HOM05D004811 ORTHO05D006888 7.6e-19 97.8 59 69.5
SalBow3G0991 Salvia bowleyana HOM05D004811 ORTHO05D006888 6.1e-16 88.2 93 46.2
Cre12.g506050 Chlamydomonas reinhardtii HOM05D004811 ORTHO05D006888 8.7e-15 84.3 105 37.1
MCO07G203 Micromonas commoda HOM05D004811 ORTHO05D006888 1.9e-14 83.2 112 33.0
PRCOL_00007255 Prasinoderma coloniale HOM05D004811 ORTHO05D006888 2.6e-11 72.8 113 31.9
ClCG04G004820 Citrullus lanatus HOM05D004811 ORTHO05D006888 7.2e-09 64.7 33 81.8
ClCG04G004810 Citrullus lanatus HOM05D004811 ORTHO05D044609 1.6e-08 63.5 90 41.1
Sed0000937 Sechium edule HOM05D004811 ORTHO05D044609 5.1e-07 58.5 39 66.7


User provided reference genes

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