Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3298 Trifolium pratense HOM05D003953 ORTHO05D004618 7.1e-89 330.5 158 100.0
TPR.G4479 Trifolium pratense HOM05D003953 ORTHO05D004618 4.4e-46 188.3 156 63.5
Psat3g190320 Pisum sativum HOM05D003953 ORTHO05D004618 2.0e-43 179.5 156 60.9
Medtr7g020830 Medicago truncatula HOM05D003953 ORTHO05D004618 8.0e-40 167.5 150 60.0
Glyma.18G281100 Glycine max HOM05D003953 ORTHO05D004618 4.9e-37 158.3 159 53.5
Lj6g0017568 Lotus japonicus HOM05D003953 ORTHO05D004618 3.1e-36 155.6 156 51.9
arahy.Tifrunner.gnm1.ann1.X5K85D Arachis hypogaea HOM05D003953 ORTHO05D004618 4.1e-36 155.2 155 52.9
Glyma.19G045500 Glycine max HOM05D003953 ORTHO05D004618 5.4e-36 154.8 156 52.6
arahy.Tifrunner.gnm1.ann1.4A8T0Q Arachis hypogaea HOM05D003953 ORTHO05D004618 7.0e-36 154.5 150 54.0
arahy.Tifrunner.gnm1.ann1.DA7VUD Arachis hypogaea HOM05D003953 ORTHO05D004618 7.0e-36 154.5 150 54.0
arahy.Tifrunner.gnm1.ann1.DBQJ9M Arachis hypogaea HOM05D003953 ORTHO05D004618 7.0e-36 154.5 150 54.0
Haze_19301 Corylus avellana HOM05D003953 ORTHO05D004618 7.0e-36 154.5 146 56.2
Lj1g0022776 Lotus japonicus HOM05D003953 ORTHO05D004618 2.0e-35 152.9 156 50.6
Lalb_Chr21g0317911 Lupinus albus HOM05D003953 ORTHO05D004618 1.3e-34 150.2 150 54.0
Oeu042438.1 Olea europaea HOM05D003953 ORTHO05D004618 1.5e-33 146.7 156 50.6
Gorai.003G126400 Gossypium raimondii HOM05D003953 ORTHO05D004618 3.3e-33 145.6 156 51.3
Hma1.2p1_0274F.1_g110300 Hydrangea macrophylla HOM05D003953 ORTHO05D004618 3.3e-33 145.6 156 50.0
CDE05G3507 Ceratophyllum demersum HOM05D003953 ORTHO05D004618 4.3e-33 145.2 156 50.6
Gohir.D03G119900 Gossypium hirsutum HOM05D003953 ORTHO05D004618 4.3e-33 145.2 156 50.6
GSVIVG01024830001 Vitis vinifera HOM05D003953 ORTHO05D004618 4.3e-33 145.2 156 51.3
Nn2g13557 Nelumbo nucifera HOM05D003953 ORTHO05D004618 5.6e-33 144.8 156 51.3
CANSAT54G2674 Cannabis sativa HOM05D003953 ORTHO05D004618 7.3e-33 144.4 156 47.4
Cc09_g02060 Coffea canephora HOM05D003953 ORTHO05D004618 7.3e-33 144.4 156 50.6
Duzib150G0459 Durio zibethinus HOM05D003953 ORTHO05D004618 7.3e-33 144.4 156 50.0
Gohir.A03G047300 Gossypium hirsutum HOM05D003953 ORTHO05D004618 7.3e-33 144.4 156 50.6
Phvul.008G020000 Phaseolus vulgaris HOM05D003953 ORTHO05D004618 7.3e-33 144.4 146 52.1
CDE05G2370 Ceratophyllum demersum HOM05D003953 ORTHO05D004618 9.5e-33 144.1 156 50.0
Gorai.004G180400 Gossypium raimondii HOM05D003953 ORTHO05D004618 1.2e-32 143.7 156 50.6
Gorai.006G047400 Gossypium raimondii HOM05D003953 ORTHO05D004618 1.2e-32 143.7 156 50.6
Dinv06204 Davidia involucrata HOM05D003953 ORTHO05D004618 1.6e-32 143.3 156 50.6
Lalb_Chr21g0317731 Lupinus albus HOM05D003953 ORTHO05D004618 1.6e-32 143.3 146 54.1
MD10G1078400 Malus domestica HOM05D003953 ORTHO05D004618 2.1e-32 142.9 156 49.4
Gorai.008G072300 Gossypium raimondii HOM05D003953 ORTHO05D004618 3.6e-32 142.1 156 50.0
Thecc.09G309300 Theobroma cacao HOM05D003953 ORTHO05D004618 6.1e-32 141.4 156 50.0
CSS0034778 Camellia sinensis var. sinensis HOM05D003953 ORTHO05D004618 8.0e-32 141.0 155 49.7
Gohir.D04G155200 Gossypium hirsutum HOM05D003953 ORTHO05D004618 8.0e-32 141.0 156 50.6
CiPaw.13G084200 Carya illinoinensis HOM05D003953 ORTHO05D004618 1.0e-31 140.6 152 49.3
Ciclev10029631m.g Citrus clementina HOM05D003953 ORTHO05D004618 1.0e-31 140.6 156 48.7
Nitab4.5_0002405g0070 Nicotiana tabacum HOM05D003953 ORTHO05D004618 1.0e-31 140.6 156 48.1
Nitab4.5_0000880g0090 Nicotiana tabacum HOM05D003953 ORTHO05D004618 1.4e-31 140.2 156 47.4
MBI04_g47172_MAGBIO Magnolia biondii HOM05D003953 ORTHO05D004618 1.8e-31 139.8 155 49.0
RcHm_v2.0_Chr2g0128821 Rosa chinensis HOM05D003953 ORTHO05D004618 1.8e-31 139.8 156 47.4
Duzib168G1059 Durio zibethinus HOM05D003953 ORTHO05D004618 2.3e-31 139.4 156 49.4
Sopen06g001840 Solanum pennellii HOM05D003953 ORTHO05D004618 2.3e-31 139.4 156 48.7
FAN03G1864 Fragaria x ananassa HOM05D003953 ORTHO05D004618 3.0e-31 139.0 156 47.4
FAN05G4346 Fragaria x ananassa HOM05D003953 ORTHO05D004618 3.0e-31 139.0 156 46.8
Gohir.A08G112100 Gossypium hirsutum HOM05D003953 ORTHO05D004618 3.0e-31 139.0 156 49.4
Gohir.D05G283601 Gossypium hirsutum HOM05D003953 ORTHO05D004618 3.0e-31 139.0 156 49.4
Gohir.D05G283900 Gossypium hirsutum HOM05D003953 ORTHO05D004618 3.0e-31 139.0 156 49.4
Gohir.D09G041350 Gossypium hirsutum HOM05D003953 ORTHO05D004618 3.0e-31 139.0 156 49.4
Gorai.009G298400 Gossypium raimondii HOM05D003953 ORTHO05D004618 3.0e-31 139.0 156 49.4
MSTRG.7467 Avicennia marina HOM05D003953 ORTHO05D004618 4.0e-31 138.7 156 47.4
CsaV3_1G035860 Cucumis sativus L. HOM05D003953 ORTHO05D004618 4.0e-31 138.7 149 49.0
FvH4_7g06540 Fragaria vesca HOM05D003953 ORTHO05D004618 4.0e-31 138.7 156 47.4
FAN01G1905 Fragaria x ananassa HOM05D003953 ORTHO05D004618 4.0e-31 138.7 156 47.4
FAN10G1677 Fragaria x ananassa HOM05D003953 ORTHO05D004618 4.0e-31 138.7 156 47.4
Gohir.D11G224100 Gossypium hirsutum HOM05D003953 ORTHO05D004618 4.0e-31 138.7 146 51.4
ClCG03G001080 Citrullus lanatus HOM05D003953 ORTHO05D004618 5.2e-31 138.3 146 49.3
ClCG03G002440 Citrullus lanatus HOM05D003953 ORTHO05D004618 5.2e-31 138.3 146 49.3
Migut.M00943 Erythranthe guttata HOM05D003953 ORTHO05D004618 6.8e-31 137.9 149 48.3
Hma1.2p1_0543F.1_g175312 Hydrangea macrophylla HOM05D003953 ORTHO05D004618 6.8e-31 137.9 156 48.1
Hma1.2p1_0543F.1_g175340 Hydrangea macrophylla HOM05D003953 ORTHO05D004618 6.8e-31 137.9 156 48.1
Lsat_1_v5_gn_5_168181 Lactuca sativa HOM05D003953 ORTHO05D004618 6.8e-31 137.9 157 47.1
PGSC0003DMG400020825 Solanum tuberosum HOM05D003953 ORTHO05D004618 6.8e-31 137.9 156 48.7
CsaV3_1G013120 Cucumis sativus L. HOM05D003953 ORTHO05D004618 8.9e-31 137.5 146 49.3
Gohir.D09G041300 Gossypium hirsutum HOM05D003953 ORTHO05D004618 8.9e-31 137.5 156 49.4
RcHm_v2.0_Chr1g0334971 Rosa chinensis HOM05D003953 ORTHO05D004618 8.9e-31 137.5 156 46.8
PGSC0003DMG400013346 Solanum tuberosum HOM05D003953 ORTHO05D004618 1.2e-30 137.1 156 48.1
TAR369G1135 Trochodendron aralioides HOM05D003953 ORTHO05D004618 1.2e-30 137.1 156 49.4
vmacro03011 Vaccinium macrocarpon HOM05D003953 ORTHO05D004618 1.2e-30 137.1 149 49.0
HPP92_011695 Vanilla planifolia HOM05D003953 ORTHO05D004618 1.2e-30 137.1 149 50.3
CAN.G1186.33 Capsicum annuum HOM05D003953 ORTHO05D004618 1.5e-30 136.7 156 47.4
Gohir.D07G180800 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.5e-30 136.7 148 50.7
Sopen11g006990 Solanum pennellii HOM05D003953 ORTHO05D004618 1.5e-30 136.7 156 48.7
TWI79G0904 Tripterygium wilfordii HOM05D003953 ORTHO05D004618 1.5e-30 136.7 155 47.1
Prupe.3G125300 Prunus persica HOM05D003953 ORTHO05D004618 2.0e-30 136.3 156 47.4
Sed0019378 Sechium edule HOM05D003953 ORTHO05D004618 2.0e-30 136.3 149 48.3
TWI75G1138 Tripterygium wilfordii HOM05D003953 ORTHO05D004618 2.0e-30 136.3 155 47.1
FAN02G2926 Fragaria x ananassa HOM05D003953 ORTHO05D004618 2.6e-30 136.0 156 46.2
Gohir.A06G083400 Gossypium hirsutum HOM05D003953 ORTHO05D004618 2.6e-30 136.0 146 50.7
Gohir.A06G113000 Gossypium hirsutum HOM05D003953 ORTHO05D004618 3.4e-30 135.6 156 48.7
Gohir.A06G119302 Gossypium hirsutum HOM05D003953 ORTHO05D004618 3.4e-30 135.6 156 48.7
Gohir.A12G147900 Gossypium hirsutum HOM05D003953 ORTHO05D004618 3.4e-30 135.6 156 48.7
Gohir.D04G005500 Gossypium hirsutum HOM05D003953 ORTHO05D004618 3.4e-30 135.6 156 48.7
Gohir.D07G180600 Gossypium hirsutum HOM05D003953 ORTHO05D004618 3.4e-30 135.6 156 48.1
Gohir.D07G184100 Gossypium hirsutum HOM05D003953 ORTHO05D004618 3.4e-30 135.6 156 48.7
Solyc11g012195.1 Solanum lycopersicum HOM05D003953 ORTHO05D004618 3.4e-30 135.6 156 48.1
Cfa020872 Carpinus fangiana HOM05D003953 ORTHO05D004618 5.7e-30 134.8 146 50.7
FAN14G2908 Fragaria x ananassa HOM05D003953 ORTHO05D004618 9.8e-30 134.0 156 45.5
SalBow8G2167 Salvia bowleyana HOM05D003953 ORTHO05D004618 9.8e-30 134.0 156 46.8
SalBow8G3221 Salvia bowleyana HOM05D003953 ORTHO05D004618 9.8e-30 134.0 156 46.8
AUR62001716 Chenopodium quinoa HOM05D003953 ORTHO05D004618 1.3e-29 133.7 155 47.1
ECA248G2580 Erigeron canadensis HOM05D003953 ORTHO05D004618 1.3e-29 133.7 148 49.3
Rhsim13G0075300 Rhododendron simsii HOM05D003953 ORTHO05D004618 1.3e-29 133.7 149 47.7
Ah.13g070310 Amaranthus hybridus HOM05D003953 ORTHO05D004618 1.7e-29 133.3 156 44.2
Cfa011625 Carpinus fangiana HOM05D003953 ORTHO05D004618 1.7e-29 133.3 146 48.6
Oeu001049.1 Olea europaea HOM05D003953 ORTHO05D004618 1.7e-29 133.3 146 48.6
SalBow1G5086 Salvia bowleyana HOM05D003953 ORTHO05D004618 1.7e-29 133.3 156 46.8
THA.LOC104800713 Tarenaya hassleriana HOM05D003953 ORTHO05D004618 1.7e-29 133.3 156 46.8
Phvul.004G063100 Phaseolus vulgaris HOM05D003953 ORTHO05D004618 2.2e-29 132.9 150 48.0
Peaxi162Scf00123g01014 Petunia axillaris HOM05D003953 ORTHO05D004618 4.9e-29 131.7 149 48.3
Manes.01G166500 Manihot esculenta HOM05D003953 ORTHO05D004618 6.4e-29 131.3 156 46.8
unitig_92.g28151 Utricularia gibba HOM05D003953 ORTHO05D004618 8.3e-29 131.0 149 47.7
HanXRQChr09g0262301 Helianthus annuus HOM05D003953 ORTHO05D004618 1.1e-28 130.6 148 49.3
Potri.001G246600 Populus trichocarpa HOM05D003953 ORTHO05D004618 1.1e-28 130.6 150 46.0
Sabra16G0149700 Salix brachista HOM05D003953 ORTHO05D004618 1.1e-28 130.6 150 46.7
FAN06G2211 Fragaria x ananassa HOM05D003953 ORTHO05D004618 1.4e-28 130.2 167 44.3
Aqoxy128s009 Aquilegia oxysepala HOM05D003953 ORTHO05D004618 1.8e-28 129.8 157 47.8
Haze_24228 Corylus avellana HOM05D003953 ORTHO05D004618 2.4e-28 129.4 146 46.6
Os12g0194700 Oryza sativa ssp. japonica HOM05D003953 ORTHO05D004618 3.2e-28 129.0 156 44.9
Sed0025309 Sechium edule HOM05D003953 ORTHO05D004618 3.2e-28 129.0 149 47.7
COL.COLO4_19069 Corchorus olitorius HOM05D003953 ORTHO05D004618 4.1e-28 128.6 149 46.3
Dinv34318 Davidia involucrata HOM05D003953 ORTHO05D004618 4.1e-28 128.6 139 51.1
Sc12g0001080 Simmondsia chinensis HOM05D003953 ORTHO05D004618 4.1e-28 128.6 156 44.9
Atru.chr3.4044 Acer truncatum HOM05D003953 ORTHO05D004618 7.0e-28 127.9 149 45.6
DCAR_015642 Daucus carota HOM05D003953 ORTHO05D004618 7.0e-28 127.9 149 47.7
Eucgr.G01038 Eucalyptus grandis HOM05D003953 ORTHO05D004618 7.0e-28 127.9 154 44.8
Nitab4.5_0002142g0080 Nicotiana tabacum HOM05D003953 ORTHO05D004618 9.2e-28 127.5 149 46.3
Gorai.011G189400 Gossypium raimondii HOM05D003953 ORTHO05D004618 1.2e-27 127.1 147 48.3
PGR102G1512 Punica granatum HOM05D003953 ORTHO05D004618 1.2e-27 127.1 146 48.6
SGA_v2.0_scaffold44G16545 Striga asiatica HOM05D003953 ORTHO05D004618 2.0e-27 126.3 156 44.9
arahy.Tifrunner.gnm1.ann1.6EI814 Arachis hypogaea HOM05D003953 ORTHO05D004618 2.7e-27 125.9 133 49.6
Zm00001eb169140 Zea mays HOM05D003953 ORTHO05D004618 2.3e-26 122.9 156 41.7
ATR1136G184 Amborella trichopoda HOM05D003953 ORTHO05D004618 3.9e-26 122.1 146 46.6
Hund03162 Selenicereus undatus HOM05D003953 ORTHO05D004618 5.0e-26 121.7 156 44.9
Aa31LG5G6920 Aethionema arabicum HOM05D003953 ORTHO05D004618 8.6e-26 120.9 156 44.9
SEGI_41348 Sequoiadendron giganteum HOM05D003953 ORTHO05D004618 8.6e-26 120.9 154 42.9
VMungo1383G2014 Vigna mungo HOM05D004418 ORTHO05D005222 1.1e-25 120.6 61 86.9
EL10Ac7g16096 Beta vulgaris HOM05D003953 ORTHO05D004618 9.5e-25 117.5 69 73.9
C04p21300 Brassica napus HOM05D003953 ORTHO05D004618 9.5e-25 117.5 146 45.9
BolC4t23659H Brassica oleracea HOM05D003953 ORTHO05D004618 9.5e-25 117.5 146 45.9
Hund04903 Selenicereus undatus HOM05D003953 ORTHO05D004618 1.6e-24 116.7 153 41.8
A05p15860 Brassica napus HOM05D003953 ORTHO05D004618 2.1e-24 116.3 149 44.3
FAN09G1296 Fragaria x ananassa HOM05D003953 ORTHO05D004618 3.6e-24 115.5 210 35.2
Sp4g12270 Schrenkiella parvula HOM05D003953 ORTHO05D004618 6.2e-24 114.8 149 44.3
TAR623G0256 Trochodendron aralioides HOM05D003953 ORTHO05D004618 6.2e-24 114.8 71 73.2
BcaB02g10260 Brassica carinata HOM05D003953 ORTHO05D004618 8.0e-24 114.4 146 45.2
AUR62020054 Chenopodium quinoa HOM05D003953 ORTHO05D004618 8.0e-24 114.4 68 75.0
Prupe.2G047700 Prunus persica HOM05D003953 ORTHO05D004618 1.4e-23 113.6 70 70.0
AagrBONN_evm.TU.Sc2ySwM_117.3970 Anthoceros agrestis HOM05D003953 ORTHO05D004618 1.8e-23 113.2 148 41.9
AagrBONN_evm.TU.Sc2ySwM_368.2434 Anthoceros agrestis HOM05D003953 ORTHO05D004618 5.2e-23 111.7 145 42.8
AagrBONN_evm.TU.Sc2ySwM_295.3 Anthoceros agrestis HOM05D003953 ORTHO05D004618 6.8e-23 111.3 145 42.8
AL4G24250 Arabidopsis lyrata HOM05D003953 ORTHO05D004618 1.2e-22 110.5 149 40.9
AagrBONN_evm.TU.Sc2ySwM_287.2 Anthoceros agrestis HOM05D003953 ORTHO05D004618 2.6e-22 109.4 145 42.1
AT2G29540 Arabidopsis thaliana HOM05D003953 ORTHO05D004618 2.6e-22 109.4 146 41.1
AagrBONN_evm.TU.Sc2ySwM_26.4 Anthoceros agrestis HOM05D003953 ORTHO05D004618 4.4e-22 108.6 143 42.0
Thhalv10017434m.g Eutrema salsugineum HOM05D003953 ORTHO05D004618 9.8e-22 107.5 149 41.6
Carub.0004s1059 Capsella rubella HOM05D003953 ORTHO05D004618 1.3e-21 107.1 149 40.3
Pp3c3_11180 Physcomitrium patens HOM05D003953 ORTHO05D004618 1.3e-21 107.1 149 40.9
C04p58680 Brassica napus HOM05D003953 ORTHO05D004618 2.9e-21 105.9 147 42.9
Cpa.g.sc112.95 Carica papaya HOM05D003953 ORTHO05D004618 2.9e-21 105.9 156 40.4
PSO384G4465 Papaver somniferum HOM05D003953 ORTHO05D004618 6.4e-21 104.8 155 39.4
PSO339G2392 Papaver somniferum HOM05D003953 ORTHO05D004618 5.4e-20 101.7 146 40.4
Mapoly0064s0065 Marchantia polymorpha HOM05D003953 ORTHO05D004618 9.2e-20 100.9 140 40.7
Eucgr.G01035 Eucalyptus grandis HOM05D003953 ORTHO05D004618 4.6e-19 98.6 69 65.2
A04p22530 Brassica napus HOM05D003953 ORTHO05D004618 3.0e-18 95.9 59 76.3
BraA04t17798Z Brassica rapa HOM05D003953 ORTHO05D004618 3.0e-18 95.9 59 76.3
CARHR122880 Cardamine hirsuta HOM05D003953 ORTHO05D004618 3.0e-18 95.9 149 36.9
SMO228G0103 Selaginella moellendorffii HOM05D003953 ORTHO05D004618 2.5e-17 92.8 78 52.6
Os11g0218100 Oryza sativa ssp. japonica HOM05D003953 ORTHO05D004618 4.3e-17 92.0 61 63.9
Mapoly0079s0034 Marchantia polymorpha HOM05D003953 ORTHO05D004618 1.8e-15 86.7 146 37.0
BcaC02g08078 Brassica carinata HOM05D003953 ORTHO05D004618 4.0e-15 85.5 52 75.0
Cre12.g484100 Chlamydomonas reinhardtii HOM05D003953 ORTHO05D004618 6.8e-15 84.7 147 34.0
Gorai.001G172100 Gossypium raimondii HOM05D003953 ORTHO05D004618 3.4e-14 82.4 113 43.4
Phvul.001G016450 Phaseolus vulgaris HOM05D003953 ORTHO05D004618 4.4e-14 82.0 113 43.4
QL01p028911 Quercus lobata HOM05D003953 ORTHO05D004618 1.3e-13 80.5 217 31.8
Gohir.D02G136950 Gossypium hirsutum HOM05D003953 ORTHO05D004618 1.7e-13 80.1 113 42.5
MCO07G039 Micromonas commoda HOM05D003953 ORTHO05D004618 1.4e-12 77.0 140 32.1
Actinidia25120 Actinidia chinensis HOM05D003953 ORTHO05D004618 5.4e-12 75.1 67 59.7
Peaxi162Scf00025g01315 Petunia axillaris HOM05D003953 ORTHO05D004618 5.4e-12 75.1 156 35.3
FvH4_6g26980 Fragaria vesca HOM05D003953 ORTHO05D004618 1.0e-10 70.9 112 37.5
SMO351G0643 Selaginella moellendorffii HOM05D003953 ORTHO05D004618 2.1e-08 63.2 42 64.3
Aqoxy1G00773 Aquilegia oxysepala HOM05D003953 ORTHO05D004618 1.1e-07 60.8 36 77.8
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 1.4e-07 60.5 49 61.2
PRCOL_00001819 Prasinoderma coloniale HOM05D003953 ORTHO05D004618 4.0e-07 58.9 131 29.8
CAN.G696.7 Capsicum annuum HOM05D003953 ORTHO05D004618 2.6e-06 56.2 101 33.7
Eucgr.G01031 Eucalyptus grandis HOM05D003953 ORTHO05D004618 9.9e-06 54.3 37 62.2


User provided reference genes

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