Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32564 Trifolium pratense HOM05D006351 ORTHO05D007796 0.0e+00 1354.7 690 100.0
Psat6g028600 Pisum sativum HOM05D006351 ORTHO05D007796 3.1e-290 1001.5 608 84.9
Ca_13046_v3 Cicer arietinum L. HOM05D006351 ORTHO05D007796 2.1e-278 962.2 585 84.3
Medtr4g014840 Medicago truncatula HOM05D006351 ORTHO05D007796 6.1e-278 960.7 609 82.6
Lj5g0002049 Lotus japonicus HOM05D006351 ORTHO05D007796 9.2e-250 867.1 608 73.5
Lalb_Chr22g0361451 Lupinus albus HOM05D006351 ORTHO05D007796 9.6e-247 857.1 593 75.2
VMungo0647G0679 Vigna mungo HOM05D006351 ORTHO05D007796 1.2e-241 840.1 609 71.3
arahy.Tifrunner.gnm1.ann1.DQM65W Arachis hypogaea HOM05D006351 ORTHO05D007796 1.7e-240 836.3 641 69.1
arahy.Tifrunner.gnm1.ann1.5RBZ70 Arachis hypogaea HOM05D006351 ORTHO05D007796 3.9e-240 835.1 641 69.1
Phvul.001G047200 Phaseolus vulgaris HOM05D006351 ORTHO05D007796 8.7e-240 833.9 612 70.8
arahy.Tifrunner.gnm1.ann1.52204A Arachis hypogaea HOM05D006351 ORTHO05D007796 7.3e-239 830.9 641 68.8
arahy.Tifrunner.gnm1.ann1.7H8NL8 Arachis hypogaea HOM05D006351 ORTHO05D007796 3.5e-225 785.4 646 66.1
Glyma.17G215800 Glycine max HOM05D006351 ORTHO05D007796 4.2e-218 761.9 608 67.3
Haze_21455 Corylus avellana HOM05D006351 ORTHO05D007796 5.7e-191 671.8 591 60.6
CiPaw.08G008200 Carya illinoinensis HOM05D006351 ORTHO05D007796 3.6e-185 652.5 593 58.5
QL02p020121 Quercus lobata HOM05D006351 ORTHO05D007796 1.8e-184 650.2 655 55.4
Dinv03414 Davidia involucrata HOM05D006351 ORTHO05D007796 2.3e-184 649.8 595 59.2
GSVIVG01035918001 Vitis vinifera HOM05D006351 ORTHO05D007796 1.2e-180 637.5 588 58.0
Cfa013099 Carpinus fangiana HOM05D006351 ORTHO05D007796 2.7e-180 636.3 593 58.5
Prupe.1G486500 Prunus persica HOM05D006351 ORTHO05D007796 2.7e-180 636.3 588 58.0
Duzib150G0289 Durio zibethinus HOM05D006351 ORTHO05D007796 8.5e-179 631.3 589 57.6
Thecc.09G019400 Theobroma cacao HOM05D006351 ORTHO05D007796 7.2e-178 628.2 608 57.1
MD15G1131200 Malus domestica HOM05D006351 ORTHO05D007796 4.1e-173 612.5 588 56.5
TAR625G1335 Trochodendron aralioides HOM05D006351 ORTHO05D007796 2.7e-172 609.8 592 56.1
Atru.chr7.2503_Atru.chr7.2504 Acer truncatum HOM05D006351 ORTHO05D007796 5.9e-172 608.6 592 56.1
CANSAT54G0019 Cannabis sativa HOM05D006351 ORTHO05D007796 3.3e-170 602.8 597 53.6
Manes.03G011600 Manihot esculenta HOM05D006351 ORTHO05D007796 3.3e-170 602.8 607 54.5
TWI34G1294 Tripterygium wilfordii HOM05D006351 ORTHO05D007796 3.3e-170 602.8 608 54.1
Sabra06G0202800 Salix brachista HOM05D006351 ORTHO05D007796 5.5e-170 602.1 585 55.4
Potri.006G259600 Populus trichocarpa HOM05D006351 ORTHO05D007796 4.7e-169 599.0 588 54.8
CsaV3_4G036840 Cucumis sativus L. HOM05D006351 ORTHO05D007796 8.9e-168 594.7 589 52.6
Sc06g0000450 Simmondsia chinensis HOM05D006351 ORTHO05D007796 3.4e-167 592.8 594 54.4
Ciclev10007789m.g Citrus clementina HOM05D006351 ORTHO05D007796 1.8e-165 587.0 591 55.0
vmacro11222 Vaccinium macrocarpon HOM05D006351 ORTHO05D007796 4.1e-165 585.9 598 53.7
FvH4_2g28280 Fragaria vesca HOM05D006351 ORTHO05D007796 1.7e-163 580.5 548 57.1
Gohir.A07G030500 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.8e-161 573.2 588 53.7
ClCG05G016570 Citrullus lanatus HOM05D006351 ORTHO05D007796 6.1e-161 572.0 642 49.5
Oeu028190.1 Olea europaea HOM05D006351 ORTHO05D007796 6.8e-160 568.5 580 54.0
Lj8A733T33 Lonicera japonica HOM05D006351 ORTHO05D007796 2.6e-159 566.6 645 51.0
Actinidia22310 Actinidia chinensis HOM05D006351 ORTHO05D007796 5.8e-159 565.5 598 53.3
Eucgr.C01685 Eucalyptus grandis HOM05D006351 ORTHO05D007796 2.2e-158 563.5 594 53.4
Gohir.D07G034400 Gossypium hirsutum HOM05D006351 ORTHO05D007796 1.4e-157 560.8 588 53.1
RcHm_v2.0_Chr6g0297191 Rosa chinensis HOM05D006351 ORTHO05D007796 4.1e-157 559.3 587 54.2
MBI14_g15653_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 3.5e-156 556.2 592 50.0
CSS0041020 Camellia sinensis var. sinensis HOM05D006351 ORTHO05D007796 5.0e-155 552.4 587 52.5
Nn8g39723 Nelumbo nucifera HOM05D006351 ORTHO05D007796 1.5e-154 550.8 604 51.5
Peaxi162Scf00116g00510 Petunia axillaris HOM05D006351 ORTHO05D007796 9.5e-154 548.1 564 53.0
Solyc01g094670.4 Solanum lycopersicum HOM05D006351 ORTHO05D007796 1.8e-152 543.9 589 50.8
PGR119G2225 Punica granatum HOM05D006351 ORTHO05D007796 6.8e-152 542.0 597 51.8
Sopen01g038480 Solanum pennellii HOM05D006351 ORTHO05D007796 6.8e-152 542.0 602 50.5
Hund03479 Selenicereus undatus HOM05D006351 ORTHO05D007796 1.4e-149 534.3 659 47.6
AUR62031572 Chenopodium quinoa HOM05D006351 ORTHO05D007796 2.7e-148 530.0 614 48.4
MSTRG.9683 Avicennia marina HOM05D006351 ORTHO05D007796 1.9e-146 523.9 590 49.5
EL10Ac2g04151 Beta vulgaris HOM05D006351 ORTHO05D007796 2.4e-141 506.9 652 43.9
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 2.4e-141 506.9 592 48.0
COL.COLO4_18917 Corchorus olitorius HOM05D006351 ORTHO05D007796 3.2e-141 506.5 605 48.4
Cc08_g00180 Coffea canephora HOM05D006351 ORTHO05D007796 1.6e-140 504.2 583 50.1
DCAR_018801 Daucus carota HOM05D006351 ORTHO05D007796 1.5e-138 497.7 614 45.6
Aqoxy7G03341 Aquilegia oxysepala HOM05D006351 ORTHO05D007796 5.6e-138 495.7 582 47.9
arahy.Tifrunner.gnm1.ann1.XZMU6N Arachis hypogaea HOM05D006351 ORTHO05D007796 2.8e-137 493.4 577 51.6
Medtr1g013030 Medicago truncatula HOM05D006351 ORTHO05D007796 5.2e-136 489.2 338 76.6
HanXRQChr16g0511151 Helianthus annuus HOM05D006351 ORTHO05D007796 3.5e-132 476.5 595 46.6
Lsat_1_v5_gn_6_115401 Lactuca sativa HOM05D006351 ORTHO05D007796 2.5e-130 470.3 594 46.8
Gorai.001G036000 Gossypium raimondii HOM05D006351 ORTHO05D007796 3.3e-130 469.9 520 51.0
Migut.G00796 Erythranthe guttata HOM05D006351 ORTHO05D007796 2.1e-129 467.2 595 45.2
ECA246G3333 Erigeron canadensis HOM05D006351 ORTHO05D007796 4.8e-129 466.1 566 47.9
MELO3C016986.2 Cucumis melo HOM05D006351 ORTHO05D007796 1.4e-128 464.5 477 52.6
THA.LOC104815006 Tarenaya hassleriana HOM05D006351 ORTHO05D007796 4.0e-128 463.0 581 47.3
AT5G11030 Arabidopsis thaliana HOM05D006351 ORTHO05D007796 3.2e-125 453.4 615 45.0
AL6G21650 Arabidopsis lyrata HOM05D006351 ORTHO05D007796 5.4e-125 452.6 584 46.2
Thhalv10013026m.g Eutrema salsugineum HOM05D006351 ORTHO05D007796 9.3e-125 451.8 594 45.1
Carub.0006s0954 Capsella rubella HOM05D006351 ORTHO05D007796 2.1e-124 450.7 584 45.4
ATR0629G052 Amborella trichopoda HOM05D006351 ORTHO05D007796 2.4e-120 437.2 581 43.2
Sp6g32460 Schrenkiella parvula HOM05D006351 ORTHO05D007796 1.7e-118 431.0 603 43.6
C09p65820 Brassica napus HOM05D006351 ORTHO05D007796 6.4e-118 429.1 590 43.2
AUR62012449 Chenopodium quinoa HOM05D006351 ORTHO05D007796 8.4e-118 428.7 544 45.6
BcaC04g19265 Brassica carinata HOM05D006351 ORTHO05D007796 4.2e-117 426.4 592 42.9
A10p26650 Brassica napus HOM05D006351 ORTHO05D007796 4.6e-116 422.9 605 41.8
FAN24G1918 Fragaria x ananassa HOM05D006351 ORTHO05D007796 3.0e-115 420.2 375 59.2
BraA10t44723Z Brassica rapa HOM05D006351 ORTHO05D007796 6.7e-115 419.1 605 41.5
FAN20G2359 Fragaria x ananassa HOM05D006351 ORTHO05D007796 8.7e-115 418.7 375 58.7
SGA_v2.0_scaffold12G06223 Striga asiatica HOM05D006351 ORTHO05D007796 1.8e-112 411.0 638 41.4
BolC9t59403H Brassica oleracea HOM05D006351 ORTHO05D007796 2.9e-110 403.7 590 41.5
FAN15G0846 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.4e-109 401.4 375 57.3
Cpa.g.sc187.30 Carica papaya HOM05D006351 ORTHO05D007796 1.0e-107 395.2 497 48.1
HPP92_020077 Vanilla planifolia HOM05D006351 ORTHO05D007796 1.8e-104 384.4 596 38.3
Hma1.2p1_0043F.1_g025900 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 2.4e-104 384.0 411 51.1
CARHR202260 Cardamine hirsuta HOM05D006351 ORTHO05D007796 3.1e-104 383.6 495 45.5
unitig_0.g2412 Utricularia gibba HOM05D006351 ORTHO05D007796 3.1e-104 383.6 574 40.4
PSO782G3777 Papaver somniferum HOM05D006351 ORTHO05D007796 1.4e-101 374.8 530 41.5
FAN27G0329 Fragaria x ananassa HOM05D006351 ORTHO05D007796 5.5e-101 372.9 375 54.1
Sed0014901 Sechium edule HOM05D006351 ORTHO05D007796 8.7e-99 365.5 409 48.4
Os08g0290100 Oryza sativa ssp. japonica HOM05D006351 ORTHO05D007796 1.9e-98 364.4 541 39.2
Nitab4.5_0002992g0070 Nicotiana tabacum HOM05D006351 ORTHO05D007796 5.7e-98 362.8 635 38.4
Aa31LG3G16100 Aethionema arabicum HOM05D006351 ORTHO05D007796 9.7e-98 362.1 580 40.7
arahy.Tifrunner.gnm1.ann1.C8TN8W Arachis hypogaea HOM05D006351 ORTHO05D007796 3.7e-97 360.1 461 50.3
Hma1.2p1_0043F.1_g025890 Hydrangea macrophylla HOM05D006351 ORTHO05D007796 5.9e-95 352.8 384 50.3
Nitab4.5_0000389g0140 Nicotiana tabacum HOM05D006351 ORTHO05D007796 4.2e-93 346.7 619 38.6
Ah.10g035670 Amaranthus hybridus HOM05D006351 ORTHO05D007796 2.8e-89 334.0 590 38.1
Cc11_g00420 Coffea canephora HOM05D006351 ORTHO05D007796 8.8e-75 285.8 274 56.6
Zm00001eb028280 Zea mays HOM05D006351 ORTHO05D007796 7.0e-72 276.2 453 37.1
CAN.G142.3 Capsicum annuum HOM05D006351 ORTHO05D007796 2.5e-53 214.5 304 44.4
Pp3c8_15630 Physcomitrium patens HOM05D006351 ORTHO05D007796 9.2e-48 196.1 500 30.6
SEGI_10292 Sequoiadendron giganteum HOM05D006351 ORTHO05D000001 2.9e-41 174.5 299 37.5
SMO200G0034 Selaginella moellendorffii HOM05D006351 ORTHO05D007796 8.3e-41 172.9 526 28.5
Pp3c20_13310 Physcomitrium patens HOM05D006351 ORTHO05D007796 6.6e-38 163.3 509 28.1
Mapoly0027s0143 Marchantia polymorpha HOM05D006351 ORTHO05D007796 2.5e-37 161.4 578 25.8
CDE02G0453 Ceratophyllum demersum HOM05D006351 ORTHO05D007796 3.6e-36 157.5 224 41.5
Medtr1g012280 Medicago truncatula HOM05D006351 ORTHO05D007796 6.2e-36 156.8 129 69.0
CANSAT25G0983 Cannabis sativa HOM05D006351 ORTHO05D007796 2.6e-34 151.4 168 49.4
FAN07G1533 Fragaria x ananassa HOM05D006351 ORTHO05D007796 1.9e-32 145.2 88 80.7
AagrBONN_evm.TU.Sc2ySwM_368.1425 Anthoceros agrestis HOM05D006351 ORTHO05D007796 1.3e-30 139.0 574 24.0
MBI14_g30358_MAGBIO Magnolia biondii HOM05D006351 ORTHO05D007796 2.6e-26 124.8 153 44.4
CAN.G142.2 Capsicum annuum HOM05D006351 ORTHO05D007796 1.2e-20 105.9 96 61.5
Medtr1g012260 Medicago truncatula HOM05D006351 ORTHO05D007796 6.9e-19 100.1 72 70.8
CAN.G142.4 Capsicum annuum HOM05D006351 ORTHO05D007796 5.8e-18 97.1 165 35.8
Medtr1g013010 Medicago truncatula HOM05D006351 ORTHO05D007796 6.4e-17 93.6 66 72.7
CBR_g18678 Chara braunii HOM05D006351 ORTHO05D007796 1.3e-12 79.3 251 25.9
Gohir.A11G232166 Gossypium hirsutum HOM05D006351 ORTHO05D007796 8.4e-09 66.6 63 49.2
Gohir.A04G102300 Gossypium hirsutum HOM05D001271 ORTHO05D007796 3.2e-08 64.7 62 50.0
Gohir.A01G131311 Gossypium hirsutum HOM05D006351 ORTHO05D007796 7.1e-08 63.5 52 55.8
Medtr1g012330 Medicago truncatula HOM05D008753 ORTHO05D010999 9.3e-08 63.2 60 63.3
Gohir.A13G118000 Gossypium hirsutum HOM05D006351 ORTHO05D007796 2.1e-07 62.0 63 47.6
Gohir.A03G098900 Gossypium hirsutum HOM05D001271 ORTHO05D007796 8.7e-06 56.6 51 52.9


User provided reference genes

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