Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G32310 Trifolium pratense HOM05D004491 ORTHO05D006742 4.9e-222 774.2 412 100.0
Medtr7g107480 Medicago truncatula HOM05D004491 ORTHO05D006742 3.0e-203 711.8 403 89.3
Ca_09104_v3 Cicer arietinum L. HOM05D004491 ORTHO05D006742 1.6e-201 706.1 403 88.3
Psat3g025480 Pisum sativum HOM05D004491 ORTHO05D006742 2.8e-201 705.3 403 88.3
Glyma.03G207900 Glycine max HOM05D004491 ORTHO05D006742 2.2e-190 669.1 403 83.1
Glyma.19G205200 Glycine max HOM05D004491 ORTHO05D006742 8.4e-190 667.2 403 83.4
Lj1g0004162 Lotus japonicus HOM05D004491 ORTHO05D006742 4.2e-189 664.8 403 82.6
VMungo1383G0326 Vigna mungo HOM05D004491 ORTHO05D006742 2.1e-188 662.5 403 82.6
Phvul.001G201100 Phaseolus vulgaris HOM05D004491 ORTHO05D006742 3.9e-187 658.3 403 82.6
Lalb_Chr20g0111001 Lupinus albus HOM05D004491 ORTHO05D006742 7.6e-183 644.0 406 80.8
Lalb_Chr25g0287571 Lupinus albus HOM05D004491 ORTHO05D006742 1.2e-180 636.7 405 80.0
Prupe.8G251000 Prunus persica HOM05D004491 ORTHO05D006742 1.6e-180 636.3 403 78.9
arahy.Tifrunner.gnm1.ann1.16527J Arachis hypogaea HOM05D004491 ORTHO05D006742 1.9e-178 629.4 405 79.5
MD03G1274300 Malus domestica HOM05D004491 ORTHO05D006742 2.5e-178 629.0 403 78.7
ClCG01G000050 Citrullus lanatus HOM05D004491 ORTHO05D006742 4.3e-178 628.2 403 77.9
arahy.Tifrunner.gnm1.ann1.5A22SW Arachis hypogaea HOM05D004491 ORTHO05D006742 9.6e-178 627.1 405 79.0
MELO3C005918.2 Cucumis melo HOM05D004491 ORTHO05D006742 9.6e-178 627.1 403 78.4
MD11G1296800 Malus domestica HOM05D004491 ORTHO05D006742 9.6e-178 627.1 403 78.4
CANSAT25G3440 Cannabis sativa HOM05D004491 ORTHO05D006742 1.6e-177 626.3 403 79.4
Haze_04798 Corylus avellana HOM05D004491 ORTHO05D006742 3.1e-176 622.1 403 78.9
FAN20G1381 Fragaria x ananassa HOM05D004491 ORTHO05D006742 4.0e-176 621.7 403 78.4
CsaV3_5G000130 Cucumis sativus L. HOM05D004491 ORTHO05D006742 6.9e-176 620.9 403 77.7
CiPaw.07G098600 Carya illinoinensis HOM05D004491 ORTHO05D006742 1.5e-175 619.8 403 78.2
FAN15G2832 Fragaria x ananassa HOM05D004491 ORTHO05D006742 1.5e-175 619.8 403 78.2
FvH4_2g24580 Fragaria vesca HOM05D004491 ORTHO05D006742 2.0e-175 619.4 403 78.2
FAN27G1423 Fragaria x ananassa HOM05D004491 ORTHO05D006742 4.5e-175 618.2 403 77.9
FAN24G0196 Fragaria x ananassa HOM05D004491 ORTHO05D006742 1.3e-174 616.7 403 77.9
Cfa006054 Carpinus fangiana HOM05D004491 ORTHO05D006742 8.4e-174 614.0 403 77.7
RcHm_v2.0_Chr6g0292401 Rosa chinensis HOM05D004491 ORTHO05D006742 4.2e-173 611.7 403 76.7
Sed0005784 Sechium edule HOM05D004491 ORTHO05D006742 1.0e-171 607.1 403 76.2
Cpa.g.sc9.150 Carica papaya HOM05D004491 ORTHO05D006742 1.3e-171 606.7 402 76.4
CSS0018382 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 3.3e-170 602.1 403 75.7
Hma1.2p1_0209F.1_g089210 Hydrangea macrophylla HOM05D004491 ORTHO05D006742 4.3e-170 601.7 403 75.4
PGR044G0382 Punica granatum HOM05D004491 ORTHO05D006742 5.7e-170 601.3 405 75.8
Eucgr.K03426 Eucalyptus grandis HOM05D004491 ORTHO05D006742 7.4e-170 600.9 403 74.4
QL12p023667 Quercus lobata HOM05D004491 ORTHO05D006742 9.6e-170 600.5 403 74.7
Sabra14G0101900 Salix brachista HOM05D004491 ORTHO05D006742 9.6e-170 600.5 403 75.7
Potri.014G135590 Populus trichocarpa HOM05D004491 ORTHO05D006742 8.2e-169 597.4 403 75.9
Cc01_g20110 Coffea canephora HOM05D004491 ORTHO05D006742 1.1e-168 597.0 403 75.4
PGSC0003DMG400024040 Solanum tuberosum HOM05D004491 ORTHO05D006742 1.8e-168 596.3 403 74.2
Solyc06g084440.3 Solanum lycopersicum HOM05D004491 ORTHO05D006742 3.1e-168 595.5 403 73.7
Nitab4.5_0003831g0010 Nicotiana tabacum HOM05D004491 ORTHO05D006742 4.1e-168 595.1 405 74.1
TWI23G1267 Tripterygium wilfordii HOM05D004491 ORTHO05D006742 4.1e-168 595.1 403 75.7
Sopen06g035830 Solanum pennellii HOM05D004491 ORTHO05D006742 6.9e-168 594.3 403 73.7
Actinidia24287 Actinidia chinensis HOM05D004491 ORTHO05D006742 9.0e-168 594.0 403 73.9
Nitab4.5_0002093g0130 Nicotiana tabacum HOM05D004491 ORTHO05D006742 1.0e-166 590.5 405 73.6
Sed0015582 Sechium edule HOM05D004491 ORTHO05D006742 1.0e-166 590.5 403 74.2
SalBow3G0026 Salvia bowleyana HOM05D004491 ORTHO05D006742 1.3e-166 590.1 403 74.9
Manes.05G069700 Manihot esculenta HOM05D004491 ORTHO05D006742 2.2e-166 589.3 403 75.4
Aqoxy5G00601 Aquilegia oxysepala HOM05D004491 ORTHO05D006742 5.0e-166 588.2 403 73.2
Potri.002G213600 Populus trichocarpa HOM05D004491 ORTHO05D006742 1.4e-165 586.6 403 74.7
Peaxi162Scf01039g00225 Petunia axillaris HOM05D004491 ORTHO05D006742 1.9e-165 586.3 404 73.8
Sabra02G0149400 Salix brachista HOM05D004491 ORTHO05D006742 4.2e-165 585.1 403 74.7
DCAR_012436 Daucus carota HOM05D004491 ORTHO05D006742 2.1e-164 582.8 404 74.0
TWI14G1187 Tripterygium wilfordii HOM05D004491 ORTHO05D006742 2.7e-164 582.4 403 73.9
Atru.chr5.1296 Acer truncatum HOM05D004491 ORTHO05D006742 3.5e-164 582.0 403 73.9
SGA_v2.0_scaffold44G16642 Striga asiatica HOM05D004491 ORTHO05D006742 7.9e-164 580.9 403 73.4
Rhsim13G0018200 Rhododendron simsii HOM05D004491 ORTHO05D006742 1.3e-163 580.1 404 73.5
vmacro09158 Vaccinium macrocarpon HOM05D004491 ORTHO05D006742 1.1e-162 577.0 404 72.8
TAR636G1438 Trochodendron aralioides HOM05D004491 ORTHO05D006742 1.5e-162 576.6 403 73.0
MSTRG.27268 Avicennia marina HOM05D004491 ORTHO05D006742 5.7e-162 574.7 403 72.7
Migut.F00598 Erythranthe guttata HOM05D004491 ORTHO05D006742 1.3e-161 573.5 403 72.2
Ciclev10011862m.g Citrus clementina HOM05D004491 ORTHO05D006742 1.6e-161 573.2 403 72.7
THA.LOC104817536 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 6.3e-161 571.2 403 71.0
Lsat_1_v5_gn_5_189841 Lactuca sativa HOM05D004491 ORTHO05D006742 8.2e-161 570.9 403 70.0
PSO170G1317 Papaver somniferum HOM05D004491 ORTHO05D006742 4.1e-160 568.5 404 71.0
PSO407G0423 Papaver somniferum HOM05D004491 ORTHO05D006742 4.1e-160 568.5 404 71.3
Aa31LG10G16820 Aethionema arabicum HOM05D004491 ORTHO05D006742 1.2e-159 567.0 402 71.6
SGA_v2.0_scaffold60G20898 Striga asiatica HOM05D004491 ORTHO05D006742 1.2e-159 567.0 435 68.3
C04p30230 Brassica napus HOM05D004491 ORTHO05D006742 2.6e-159 565.8 403 71.0
BolC4t24555H Brassica oleracea HOM05D004491 ORTHO05D006742 2.6e-159 565.8 403 71.0
Nn3g21241 Nelumbo nucifera HOM05D004491 ORTHO05D006742 7.7e-159 564.3 404 70.8
unitig_37.g12470 Utricularia gibba HOM05D004491 ORTHO05D006742 1.7e-158 563.1 404 70.5
BcaC02g10333 Brassica carinata HOM05D004491 ORTHO05D006742 2.9e-158 562.4 403 70.7
A04p00390 Brassica napus HOM05D004491 ORTHO05D006742 5.0e-158 561.6 403 70.2
ECA248G1403 Erigeron canadensis HOM05D004491 ORTHO05D006742 8.5e-158 560.8 404 70.5
MSTRG.8371 Avicennia marina HOM05D004491 ORTHO05D006742 1.4e-157 560.1 403 70.7
BraA04t15757Z Brassica rapa HOM05D004491 ORTHO05D006742 1.4e-157 560.1 403 70.0
AT3G63000 Arabidopsis thaliana HOM05D004491 ORTHO05D006742 1.9e-157 559.7 402 69.9
BcaB02g08082 Brassica carinata HOM05D004491 ORTHO05D006742 2.5e-157 559.3 403 70.7
Carub.0005s2965 Capsella rubella HOM05D004491 ORTHO05D006742 2.5e-157 559.3 402 69.9
Gorai.004G139800 Gossypium raimondii HOM05D004491 ORTHO05D006742 9.4e-157 557.4 403 70.0
AL5G45780 Arabidopsis lyrata HOM05D004491 ORTHO05D006742 1.2e-156 557.0 402 70.1
HanXRQChr11g0334841 Helianthus annuus HOM05D004491 ORTHO05D006742 1.2e-156 557.0 402 69.7
Duzib211G0578 Durio zibethinus HOM05D004491 ORTHO05D006742 1.6e-156 556.6 403 70.2
Aa31LG1G29390 Aethionema arabicum HOM05D004491 ORTHO05D006742 3.6e-156 555.4 403 71.0
Gohir.D08G136600 Gossypium hirsutum HOM05D004491 ORTHO05D006742 3.6e-156 555.4 403 69.7
Thecc.01G288700 Theobroma cacao HOM05D004491 ORTHO05D006742 4.6e-156 555.1 403 70.0
Ah.02g115120 Amaranthus hybridus HOM05D004491 ORTHO05D006742 7.9e-156 554.3 409 69.2
Thhalv10001466m.g Eutrema salsugineum HOM05D004491 ORTHO05D006742 7.9e-156 554.3 403 70.2
Oeu022805.1 Olea europaea HOM05D004491 ORTHO05D006742 1.8e-155 553.1 448 64.7
Hund18024 Selenicereus undatus HOM05D004491 ORTHO05D006742 3.0e-155 552.4 408 68.6
CSS0045203 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 6.7e-155 551.2 403 68.5
Gohir.A08G115800 Gossypium hirsutum HOM05D004491 ORTHO05D006742 1.1e-154 550.4 403 69.2
AT2G47970 Arabidopsis thaliana HOM05D004491 ORTHO05D006742 1.5e-154 550.1 403 69.5
Sp5g00520 Schrenkiella parvula HOM05D004491 ORTHO05D006742 2.5e-154 549.3 403 68.7
ATR0706G070 Amborella trichopoda HOM05D004491 ORTHO05D006742 3.3e-154 548.9 403 69.0
Gorai.008G007400 Gossypium raimondii HOM05D004491 ORTHO05D006742 3.3e-154 548.9 403 69.0
Dinv32984 Davidia involucrata HOM05D004682 ORTHO05D006197 4.3e-154 548.5 379 73.1
AL4G47560 Arabidopsis lyrata HOM05D004491 ORTHO05D006742 1.3e-153 547.0 403 68.7
CARHR173290 Cardamine hirsuta HOM05D004491 ORTHO05D006742 3.7e-153 545.4 402 68.4
CDE01G0135 Ceratophyllum demersum HOM05D004491 ORTHO05D006742 8.2e-153 544.3 403 68.0
SEGI_03905 Sequoiadendron giganteum HOM05D004491 ORTHO05D006742 1.8e-152 543.1 404 68.1
vmacro09175 Vaccinium macrocarpon HOM05D004491 ORTHO05D006742 1.8e-152 543.1 469 62.3
Gohir.D12G007200 Gossypium hirsutum HOM05D004491 ORTHO05D006742 3.1e-152 542.3 403 68.0
Gohir.A12G007800 Gossypium hirsutum HOM05D004491 ORTHO05D006742 4.1e-152 542.0 403 68.0
Sp4g29890 Schrenkiella parvula HOM05D004491 ORTHO05D006742 5.3e-152 541.6 403 69.5
MBI19_g09851_MAGBIO Magnolia biondii HOM05D004491 ORTHO05D006742 3.4e-151 538.9 409 68.7
TAR365G0641 Trochodendron aralioides HOM05D004491 ORTHO05D006742 4.5e-151 538.5 403 68.0
AUR62043003 Chenopodium quinoa HOM05D004491 ORTHO05D006742 1.0e-150 537.3 409 66.7
CDE12G0180 Ceratophyllum demersum HOM05D004491 ORTHO05D006742 8.5e-150 534.3 403 66.5
EL10Ac5g11643 Beta vulgaris HOM05D004491 ORTHO05D006742 3.6e-148 528.9 459 61.2
Lj1C40T6 Lonicera japonica HOM05D004491 ORTHO05D006742 4.4e-146 521.9 499 58.1
HPP92_001332 Vanilla planifolia HOM05D004491 ORTHO05D006742 1.2e-143 513.8 407 64.4
SHI15482 Sapria himalayana HOM05D004491 ORTHO05D006742 4.8e-137 491.9 423 62.4
COL.COLO4_08043 Corchorus olitorius HOM05D004491 ORTHO05D006742 4.5e-135 485.3 339 72.9
Mapoly0023s0134 Marchantia polymorpha HOM05D004491 ORTHO05D006742 2.2e-134 483.0 403 62.5
CSS0029376 Camellia sinensis var. sinensis HOM05D004491 ORTHO05D006742 8.3e-129 464.5 325 71.4
Sc05g0004670 Simmondsia chinensis HOM05D004491 ORTHO05D006742 3.1e-128 462.6 343 70.6
AagrBONN_evm.TU.Sc2ySwM_228.2306 Anthoceros agrestis HOM05D004491 ORTHO05D006742 2.0e-127 459.9 403 59.3
Duzib133G1404 Durio zibethinus HOM05D004491 ORTHO05D006742 1.2e-124 450.7 331 69.5
CAN.G1209.44 Capsicum annuum HOM05D004491 ORTHO05D006742 2.7e-124 449.5 295 74.6
Pp3c4_25410 Physcomitrium patens HOM05D004491 ORTHO05D006742 4.9e-121 438.7 403 55.1
Os01g0377700 Oryza sativa ssp. japonica HOM05D004491 ORTHO05D006742 1.2e-116 424.1 410 54.9
AUR62034024 Chenopodium quinoa HOM05D004491 ORTHO05D006742 2.1e-116 423.3 336 65.5
SMO011G0024 Selaginella moellendorffii HOM05D004491 ORTHO05D006742 2.3e-115 419.9 403 54.8
Zm00001eb366640 Zea mays HOM05D004491 ORTHO05D006742 3.7e-113 412.5 410 53.7
Zm00001eb146560 Zea mays HOM05D004491 ORTHO05D006742 6.6e-110 401.7 410 52.0
THA.LOC104820469 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 1.4e-96 357.5 238 76.9
PSO384G1012 Papaver somniferum HOM05D004491 ORTHO05D006742 1.2e-92 344.4 231 74.5
PRCOL_00001630 Prasinoderma coloniale HOM05D004491 ORTHO05D006742 5.3e-75 285.8 426 42.0
THA.LOC104799698 Tarenaya hassleriana HOM05D004491 ORTHO05D006742 1.7e-70 270.8 170 78.2
MCO03G089 Micromonas commoda HOM05D004491 ORTHO05D006742 1.3e-68 264.6 394 41.6
Duzib147G1201 Durio zibethinus HOM05D004491 ORTHO05D006742 8.7e-62 241.9 238 58.4
Aa31sc35G70 Aethionema arabicum HOM05D004491 ORTHO05D006742 1.0e-54 218.4 182 63.7
Cre06.g293051 Chlamydomonas reinhardtii HOM05D000780 ORTHO05D001132 4.1e-51 206.5 322 40.4
GSVIVG01011019001 Vitis vinifera HOM05D004491 ORTHO05D006742 1.5e-42 177.9 103 84.5
Actinidia00704 Actinidia chinensis HOM05D004491 ORTHO05D019493 1.5e-37 161.4 242 43.8
Zm00001eb098320 Zea mays HOM05D004491 ORTHO05D006742 4.1e-35 153.3 154 51.9
Sopen08g018880 Solanum pennellii HOM05D004491 ORTHO05D006742 2.8e-28 130.6 81 76.5
BcaB02g07304 Brassica carinata HOM05D004491 ORTHO05D091651 3.1e-27 127.1 221 38.0
AUR62034023 Chenopodium quinoa HOM05D004491 ORTHO05D019493 2.2e-25 120.9 94 62.8
BcaC08g45254 Brassica carinata HOM05D004491 ORTHO05D032214 2.7e-23 114.0 74 70.3
BolC6t38019H Brassica oleracea HOM05D004491 ORTHO05D032214 2.7e-23 114.0 74 70.3
C06p28510 Brassica napus HOM05D004491 ORTHO05D032214 1.8e-22 111.3 74 68.9
SEGI_06416 Sequoiadendron giganteum HOM05D004491 ORTHO05D019493 4.4e-21 106.7 74 66.2
C08p37710 Brassica napus HOM05D004491 ORTHO05D031847 1.7e-20 104.8 91 59.3
BolC8t51354H Brassica oleracea HOM05D004491 ORTHO05D031847 1.7e-20 104.8 91 59.3
BcaC07g40782 Brassica carinata HOM05D004491 ORTHO05D031847 5.3e-19 99.8 91 58.2
Gohir.A11G248600 Gossypium hirsutum HOM05D004491 ORTHO05D019493 7.7e-18 95.9 78 59.0
SHI00898 Sapria himalayana HOM05D004491 ORTHO05D019493 2.2e-17 94.4 73 60.3
BcaC07g42722 Brassica carinata HOM05D004491 ORTHO05D095981 8.5e-17 92.4 66 62.1
HPP92_013688 Vanilla planifolia HOM05D004491 ORTHO05D006742 5.5e-16 89.7 82 57.3
Actinidia28542 Actinidia chinensis HOM05D004491 ORTHO05D057841 1.6e-15 88.2 170 38.2
Gohir.A04G054626 Gossypium hirsutum HOM05D004491 ORTHO05D019493 8.0e-15 85.9 74 55.4
BcaC07g42719 Brassica carinata HOM05D004491 ORTHO05D094938 3.0e-14 84.0 67 61.2
SHI19086 Sapria himalayana HOM05D004491 ORTHO05D019493 1.2e-13 82.0 59 67.8
BolC6t38020H Brassica oleracea HOM05D004491 ORTHO05D040597 1.2e-07 62.0 103 40.8
C06p28520 Brassica napus HOM05D004491 ORTHO05D040597 1.6e-07 61.6 103 39.8
CAN.G1682.2 Capsicum annuum HOM05D011687 ORTHO05D014163 4.0e-06 57.0 74 45.9


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