Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31549 Trifolium pratense HOM05D003517 ORTHO05D009798 7.9e-67 256.9 125 100.0
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 1.8e-42 176.0 91 92.3
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 1.8e-42 176.0 91 92.3
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 1.8e-42 176.0 91 92.3
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 4.0e-42 174.9 91 91.2
TPR.G20538 Trifolium pratense HOM05D003517 ORTHO05D009798 5.2e-42 174.5 90 92.2
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 1.2e-41 173.3 91 90.1
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 3.4e-41 171.8 91 90.1
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 3.7e-40 168.3 91 87.9
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 1.1e-39 166.8 91 87.9
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 1.1e-39 166.8 91 87.9
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 1.1e-39 166.8 91 87.9
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 3.1e-39 165.2 91 90.1
Hma1.2p1_0020F.1_g014220 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 2.3e-37 159.1 91 83.5
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 3.8e-37 158.3 89 85.4
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 3.8e-37 158.3 94 84.0
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 8.6e-37 157.1 90 85.6
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 2.8e-35 152.1 91 79.1
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.8e-35 152.1 91 80.2
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 4.7e-35 151.4 91 80.2
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 4.7e-35 151.4 91 80.2
BolSC28t60424H Brassica oleracea HOM05D003517 ORTHO05D009798 4.7e-35 151.4 91 80.2
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 4.7e-35 151.4 91 80.2
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 4.7e-35 151.4 91 80.2
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 4.7e-35 151.4 91 80.2
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 4.7e-35 151.4 91 80.2
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 4.7e-35 151.4 91 80.2
PGSC0003DMG400033608 Solanum tuberosum HOM05D003517 ORTHO05D009798 4.7e-35 151.4 91 80.2
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 1.4e-34 149.8 91 79.1
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 1.4e-34 149.8 91 79.1
CAN.G1109.3 Capsicum annuum HOM05D003517 ORTHO05D009798 1.4e-34 149.8 91 78.0
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 1.4e-34 149.8 91 79.1
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 4.0e-34 148.3 91 81.3
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 1.5e-33 146.4 91 79.1
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 4.4e-33 144.8 91 75.8
Lalb_Chr22g0353801 Lupinus albus HOM05D003517 ORTHO05D009798 5.7e-33 144.4 82 84.1
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 1.4e-31 139.8 90 75.6
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 1.4e-31 139.8 90 75.6
Zm00001eb438100 Zea mays HOM05D003517 ORTHO05D009798 1.4e-31 139.8 90 75.6
Zm00001eb438980 Zea mays HOM05D003517 ORTHO05D009798 1.4e-31 139.8 90 75.6
Zm00001eb439060 Zea mays HOM05D003517 ORTHO05D009798 1.4e-31 139.8 90 75.6
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 1.8e-31 139.4 81 81.5
Nitab4.5_0000172g2160 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.6e-30 136.3 86 74.4
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.0e-30 136.0 91 72.5
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 2.7e-30 135.6 78 87.2
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 1.3e-29 133.3 78 85.9
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 2.3e-29 132.5 89 76.4
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 2.3e-29 132.5 89 76.4
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 2.3e-29 132.5 89 76.4
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 2.3e-29 132.5 89 76.4
BraSC48t46337Z Brassica rapa HOM05D003517 ORTHO05D009798 1.1e-28 130.2 80 81.2
Nn1g09918 Nelumbo nucifera HOM05D003517 ORTHO05D009798 6.8e-26 120.9 67 85.1
CARHR287140 Cardamine hirsuta HOM05D003517 ORTHO05D009798 8.3e-24 114.0 66 83.3
EL10Ac7g18051 Beta vulgaris HOM05D003517 ORTHO05D009798 1.6e-22 109.8 106 53.8
Nitab4.5_0001152g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.0e-22 109.4 72 72.2
Nitab4.5_0000172g1110 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.1e-19 99.4 71 66.2
PSO585G0042 Papaver somniferum HOM05D003517 ORTHO05D009798 1.2e-17 93.6 90 55.6
PSO063G7170 Papaver somniferum HOM05D003517 ORTHO05D009798 2.0e-17 92.8 90 54.4
HanXRQChr10g0302361 Helianthus annuus HOM05D003517 ORTHO05D009798 2.1e-14 82.8 70 61.4
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 6.0e-14 81.3 91 46.2
Nitab4.5_0001127g0280 Nicotiana tabacum HOM05D003517 ORTHO05D009794 2.3e-13 79.3 51 70.6
Solyc11g030940.3 Solanum lycopersicum HOM05D003517 ORTHO05D009798 1.5e-12 76.6 53 67.9
Nitab4.5_0008059g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.8e-11 72.4 40 87.5
Lj2g0009144 Lotus japonicus HOM05D000751 ORTHO05D000889 3.1e-10 68.9 37 86.5
Nitab4.5_0001152g0480 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.4e-09 65.1 41 75.6
Oeu013683.1 Olea europaea HOM05D003517 ORTHO05D009798 4.9e-08 61.6 36 75.0
CSS0018598 Camellia sinensis var. sinensis HOM05D002859 ORTHO05D003120 4.1e-07 58.5 45 62.2
Nitab4.5_0001152g1080 Nicotiana tabacum HOM05D003517 ORTHO05D009798 9.2e-07 57.4 33 81.8
Nitab4.5_0003945g0070 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.2e-06 57.0 43 58.1
Dinv18903 Davidia involucrata HOM05D003517 ORTHO05D009798 1.6e-06 56.6 26 96.2
SGA_v2.0_scaffold648G53338 Striga asiatica HOM05D003517 ORTHO05D009798 6.0e-06 54.7 36 63.9


User provided reference genes

Program Settings