Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31456 Trifolium pratense HOM05D006224 ORTHO05D007691 3.5e-205 718.0 351 100.0
Medtr6g086510 Medicago truncatula HOM05D006224 ORTHO05D007691 3.1e-153 545.4 367 74.4
Ca_30117_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 1.0e-143 513.8 336 76.2
Lj2g0020407 Lotus japonicus HOM05D006224 ORTHO05D007691 5.4e-137 491.5 336 73.2
TPR.G31453 Trifolium pratense HOM05D006224 ORTHO05D007691 1.1e-134 483.8 338 74.6
Glyma.09G187600 Glycine max HOM05D006224 ORTHO05D007691 2.1e-133 479.6 340 70.9
Psat1g037920 Pisum sativum HOM05D006224 ORTHO05D007691 1.5e-131 473.4 302 76.5
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 2.9e-130 469.2 339 69.3
Phvul.004G160700 Phaseolus vulgaris HOM05D006224 ORTHO05D007691 1.4e-129 466.8 339 68.4
arahy.Tifrunner.gnm1.ann1.X15ZNM Arachis hypogaea HOM05D006224 ORTHO05D007691 2.4e-129 466.1 325 69.5
Lalb_Chr14g0371331 Lupinus albus HOM05D006224 ORTHO05D007691 3.2e-129 465.7 344 69.8
arahy.Tifrunner.gnm1.ann1.NKB3PQ Arachis hypogaea HOM05D006224 ORTHO05D007691 1.3e-127 460.3 327 69.4
Ca_25513_v3 Cicer arietinum L. HOM05D006224 ORTHO05D007691 6.8e-124 448.0 268 80.6
Glyma.18G076000 Glycine max HOM05D006224 ORTHO05D007691 7.5e-123 444.5 330 67.3
QL02p086060 Quercus lobata HOM05D006224 ORTHO05D007691 5.4e-113 411.8 329 62.6
QL02p086023 Quercus lobata HOM05D006224 ORTHO05D007691 6.0e-112 408.3 327 63.3
Cfa003290 Carpinus fangiana HOM05D006224 ORTHO05D007691 3.0e-111 406.0 345 62.3
Dinv41578 Davidia involucrata HOM05D006224 ORTHO05D007691 3.3e-110 402.5 304 64.1
Eucgr.E02819 Eucalyptus grandis HOM05D006224 ORTHO05D007691 3.1e-108 396.0 304 62.5
Actinidia07421 Actinidia chinensis HOM05D006224 ORTHO05D007691 4.0e-108 395.6 324 62.3
CANSAT56G1593 Cannabis sativa HOM05D006224 ORTHO05D007691 5.2e-108 395.2 330 61.5
Oeu060631.1 Olea europaea HOM05D006224 ORTHO05D007691 1.5e-107 393.7 315 60.3
CANSAT56G0016 Cannabis sativa HOM05D006224 ORTHO05D007691 3.4e-107 392.5 330 61.2
Manes.16G071100 Manihot esculenta HOM05D006224 ORTHO05D007691 3.4e-107 392.5 309 62.1
Ciclev10008608m.g Citrus clementina HOM05D006224 ORTHO05D007691 4.4e-107 392.1 336 58.9
vmacro06195 Vaccinium macrocarpon HOM05D006224 ORTHO05D007691 9.9e-107 391.0 327 59.3
MD15G1189600 Malus domestica HOM05D006224 ORTHO05D007691 1.3e-106 390.6 308 64.3
GSVIVG01015431001 Vitis vinifera HOM05D006224 ORTHO05D007691 1.1e-105 387.5 303 62.7
TWI34G0303 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 1.9e-105 386.7 309 61.8
MELO3C025318.2 Cucumis melo HOM05D006224 ORTHO05D007691 4.2e-105 385.6 317 60.6
DCAR_010440 Daucus carota HOM05D006224 ORTHO05D007691 7.1e-105 384.8 311 61.4
TAR383G0021 Trochodendron aralioides HOM05D006224 ORTHO05D007691 7.1e-105 384.8 346 57.8
Haze_25683 Corylus avellana HOM05D006224 ORTHO05D007691 9.3e-105 384.4 352 58.8
Atru.chr7.1298 Acer truncatum HOM05D006224 ORTHO05D007691 2.1e-104 383.3 316 59.8
Sed0009228 Sechium edule HOM05D006224 ORTHO05D007691 2.7e-104 382.9 321 61.7
FvH4_1g05360 Fragaria vesca HOM05D006224 ORTHO05D007691 3.5e-104 382.5 323 61.0
GSVIVG01015429001 Vitis vinifera HOM05D006224 ORTHO05D007691 1.0e-103 380.9 303 62.4
Rhsim03G0244800 Rhododendron simsii HOM05D006224 ORTHO05D007691 1.3e-103 380.6 306 61.1
ClCG00G002580 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.7e-103 380.2 321 60.4
ClCG06G010400 Citrullus lanatus HOM05D006224 ORTHO05D007691 1.7e-103 380.2 321 60.4
FAN23G1546 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.3e-103 379.8 324 60.2
Cc06_g09350 Coffea canephora HOM05D006224 ORTHO05D007691 3.9e-103 379.0 332 56.9
FAN19G0264 Fragaria x ananassa HOM05D006224 ORTHO05D007691 6.6e-103 378.3 328 60.1
Migut.K00473 Erythranthe guttata HOM05D006224 ORTHO05D007691 8.7e-103 377.9 339 56.6
Ciclev10008605m.g Citrus clementina HOM05D006224 ORTHO05D007691 1.1e-102 377.5 322 58.1
CiPaw.03G235000 Carya illinoinensis HOM05D006224 ORTHO05D007691 1.5e-102 377.1 304 61.8
Sc08g0007140 Simmondsia chinensis HOM05D006224 ORTHO05D007691 4.3e-102 375.6 332 57.5
CsaV3_1G030820 Cucumis sativus L. HOM05D006224 ORTHO05D007691 7.3e-102 374.8 316 60.4
FAN28G2414 Fragaria x ananassa HOM05D006224 ORTHO05D007691 7.3e-102 374.8 323 59.8
RcHm_v2.0_Chr2g0091041 Rosa chinensis HOM05D006224 ORTHO05D007691 7.3e-102 374.8 298 62.1
Nitab4.5_0013433g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 9.6e-102 374.4 305 62.0
ATR0037G051 Amborella trichopoda HOM05D006224 ORTHO05D007691 2.1e-101 373.2 314 58.9
Cpa.g.sc23.139 Carica papaya HOM05D006224 ORTHO05D007691 2.1e-101 373.2 344 55.5
FAN26G2363 Fragaria x ananassa HOM05D006224 ORTHO05D007691 2.8e-101 372.9 307 61.6
ClCG00G002210 Citrullus lanatus HOM05D006224 ORTHO05D007691 4.8e-101 372.1 313 61.3
ClCG06G010410 Citrullus lanatus HOM05D006224 ORTHO05D007691 4.8e-101 372.1 313 61.3
Thecc.09G114600 Theobroma cacao HOM05D006224 ORTHO05D007691 6.2e-101 371.7 346 57.8
TWI34G1467 Tripterygium wilfordii HOM05D006224 ORTHO05D007691 8.1e-101 371.3 338 55.6
Nitab4.5_0002361g0030 Nicotiana tabacum HOM05D006224 ORTHO05D007691 1.1e-100 370.9 305 61.6
BolC9t58538H Brassica oleracea HOM05D006224 ORTHO05D007691 1.8e-100 370.2 316 58.5
Aqoxy5G03788 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 5.3e-100 368.6 336 56.2
AT5G19460 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.2e-99 367.5 343 56.6
HanXRQChr05g0138301 Helianthus annuus HOM05D006224 ORTHO05D007691 1.2e-99 367.5 316 58.5
Hund26119 Selenicereus undatus HOM05D006224 ORTHO05D007691 2.0e-99 366.7 328 57.3
Sopen07g017160 Solanum pennellii HOM05D006224 ORTHO05D007691 4.4e-99 365.5 310 58.1
PGR042G0994 Punica granatum HOM05D006224 ORTHO05D007691 5.8e-99 365.2 337 56.4
A10p20240 Brassica napus HOM05D006224 ORTHO05D007691 9.9e-99 364.4 317 57.7
PSO782G3139 Papaver somniferum HOM05D006224 ORTHO05D007691 1.3e-98 364.0 308 58.1
CDE04G0176 Ceratophyllum demersum HOM05D006224 ORTHO05D007691 1.7e-98 363.6 332 56.3
MBI06_g04550_MAGBIO Magnolia biondii HOM05D006224 ORTHO05D007691 1.7e-98 363.6 354 54.0
Solyc07g009170.4 Solanum lycopersicum HOM05D006224 ORTHO05D007691 3.8e-98 362.5 310 57.7
Gorai.004G279400 Gossypium raimondii HOM05D006224 ORTHO05D007691 4.9e-98 362.1 310 57.7
Gohir.D08G261300 Gossypium hirsutum HOM05D006224 ORTHO05D007691 1.1e-97 360.9 310 57.4
Lsat_1_v5_gn_8_94740 Lactuca sativa HOM05D006224 ORTHO05D007691 1.4e-97 360.5 308 57.1
PGSC0003DMG400024204 Solanum tuberosum HOM05D006224 ORTHO05D007691 1.4e-97 360.5 310 57.4
Thhalv10013889m.g Eutrema salsugineum HOM05D006224 ORTHO05D007691 2.4e-97 359.8 336 56.5
Zm00001eb309830 Zea mays HOM05D006224 ORTHO05D007691 4.2e-97 359.0 315 56.2
PSO063G0773 Papaver somniferum HOM05D006224 ORTHO05D007691 7.1e-97 358.2 330 55.5
Gohir.A08G240600 Gossypium hirsutum HOM05D006224 ORTHO05D007691 9.3e-97 357.8 335 56.1
AL6G30950 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 2.1e-96 356.7 329 57.8
SalBow1G0968 Salvia bowleyana HOM05D006224 ORTHO05D007691 3.5e-96 355.9 326 54.9
Aa31LG11G5060 Aethionema arabicum HOM05D006224 ORTHO05D007691 4.6e-96 355.5 314 57.0
HPP92_009101 Vanilla planifolia HOM05D006224 ORTHO05D007691 4.6e-96 355.5 339 53.4
AUR62011028 Chenopodium quinoa HOM05D006224 ORTHO05D007691 1.7e-95 353.6 327 57.5
THA.LOC104799742 Tarenaya hassleriana HOM05D006224 ORTHO05D007691 1.7e-95 353.6 261 65.9
AT5G19470 Arabidopsis thaliana HOM05D006224 ORTHO05D007691 1.1e-94 350.9 330 56.1
AL6G30960 Arabidopsis lyrata HOM05D006224 ORTHO05D007691 1.5e-94 350.5 322 57.5
Carub.0006s1780 Capsella rubella HOM05D006224 ORTHO05D007691 1.5e-94 350.5 345 53.9
Aqoxy5G03790 Aquilegia oxysepala HOM05D006224 ORTHO05D007691 4.3e-94 349.0 324 54.3
Potri.006G157700 Populus trichocarpa HOM05D006224 ORTHO05D007691 9.6e-94 347.8 309 56.3
Duzib187G0885 Durio zibethinus HOM05D006224 ORTHO05D007691 2.1e-93 346.7 321 57.6
Sp6g24950 Schrenkiella parvula HOM05D006224 ORTHO05D007691 6.2e-93 345.1 324 56.8
ECA236G3755 Erigeron canadensis HOM05D006224 ORTHO05D007691 4.5e-91 339.0 255 64.7
Peaxi162Scf00560g00629 Petunia axillaris HOM05D006224 ORTHO05D007691 5.8e-91 338.6 332 54.5
EL10Ac8g18541 Beta vulgaris HOM05D006224 ORTHO05D007691 9.9e-91 337.8 303 58.1
C09p56840 Brassica napus HOM05D006224 ORTHO05D007691 1.7e-90 337.0 316 55.4
SGA_v2.0_scaffold23G10152 Striga asiatica HOM05D006224 ORTHO05D007691 2.9e-90 336.3 317 56.2
CSS0033373 Camellia sinensis var. sinensis HOM05D006224 ORTHO05D007691 6.4e-90 335.1 366 51.6
Sabra06G0124600 Salix brachista HOM05D006224 ORTHO05D007691 4.2e-89 332.4 320 53.4
BraA10t44095Z Brassica rapa HOM05D006224 ORTHO05D007691 9.3e-89 331.3 294 56.5
FAN26G3318 Fragaria x ananassa HOM05D006224 ORTHO05D007691 6.0e-88 328.6 352 52.6
CAN.G929.19 Capsicum annuum HOM05D006224 ORTHO05D007691 1.0e-87 327.8 254 63.0
Pp3c12_9090 Physcomitrium patens HOM05D006224 ORTHO05D007691 1.5e-83 313.9 293 52.2
Mapoly0084s0007 Marchantia polymorpha HOM05D006224 ORTHO05D007691 5.5e-81 305.4 301 50.5
Peaxi162Scf00560g00615 Petunia axillaris HOM05D006224 ORTHO05D007691 1.0e-79 301.2 319 50.5
Nn8g39262 Nelumbo nucifera HOM05D006224 ORTHO05D007691 1.5e-75 287.3 340 48.2
Lj7A644T17 Lonicera japonica HOM05D006224 ORTHO05D007691 3.4e-75 286.2 361 44.6
SMO347G0504 Selaginella moellendorffii HOM05D006224 ORTHO05D007691 4.2e-73 279.3 272 52.2
Potri.006G157800 Populus trichocarpa HOM05D006224 ORTHO05D007691 3.1e-68 263.1 309 46.9
HanXRQChr05g0139161 Helianthus annuus HOM05D006224 ORTHO05D007691 5.3e-68 262.3 323 47.1
unitig_748.g7154 Utricularia gibba HOM05D006224 ORTHO05D007691 6.9e-68 261.9 208 59.6
Prupe.7G186600 Prunus persica HOM05D006224 ORTHO05D007691 1.0e-66 258.1 213 60.6
Cre13.g582201 Chlamydomonas reinhardtii HOM05D006224 ORTHO05D007691 1.8e-63 247.3 279 47.0
AagrBONN_evm.TU.Sc2ySwM_228.2202 Anthoceros agrestis HOM05D006224 ORTHO05D007691 5.7e-62 242.3 207 57.0
Pp3c6_16000 Physcomitrium patens HOM05D006224 ORTHO05D007691 7.7e-59 231.9 301 42.5
AUR62033400 Chenopodium quinoa HOM05D006224 ORTHO05D007691 2.7e-56 223.4 270 48.5
Pp3c3_27400 Physcomitrium patens HOM05D006224 ORTHO05D007691 2.8e-53 213.4 282 37.2
MCO11G748 Micromonas commoda HOM05D006224 ORTHO05D007691 2.1e-48 197.2 281 40.2
PRCOL_00004258 Prasinoderma coloniale HOM05D006224 ORTHO05D007691 8.0e-40 168.7 206 44.2
CARHR193460 Cardamine hirsuta HOM05D006224 ORTHO05D007691 4.0e-31 139.8 110 62.7
Os09g0322200 Oryza sativa ssp. japonica HOM05D006224 ORTHO05D007691 8.8e-31 138.7 145 49.7
Cfa025487 Carpinus fangiana HOM05D006224 ORTHO05D007691 4.0e-23 113.2 187 35.3
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 5.2e-23 112.8 69 66.7
Ah.09g227190 Amaranthus hybridus HOM05D006224 ORTHO05D007691 2.5e-17 94.0 68 66.2
unitig_748.g7155 Utricularia gibba HOM05D006224 ORTHO05D007691 8.0e-16 89.0 63 66.7
MSTRG.26438 Avicennia marina HOM05D006224 ORTHO05D007691 1.5e-09 68.2 60 53.3
SEGI_12041 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 6.8e-07 59.3 69 50.7
vmacro11393 Vaccinium macrocarpon HOM05D003441 ORTHO05D004516 6.8e-07 59.3 43 60.5
SEGI_03040 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 3.4e-06 57.0 42 57.1


User provided reference genes

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