Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 2.5e-297 1024.6 499 100.0
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 4.8e-248 860.9 505 84.4
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.1e-244 849.7 475 87.6
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 7.7e-230 800.4 492 79.3
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 1.3e-213 746.5 525 72.6
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 7.2e-212 740.7 499 74.5
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 2.1e-211 739.2 505 73.7
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 2.0e-209 732.6 500 74.4
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 1.8e-207 726.1 496 74.0
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 4.7e-195 684.9 454 74.9
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 4.9e-192 674.9 494 65.8
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 1.2e-190 670.2 493 66.9
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 1.2e-187 660.2 490 66.3
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 1.6e-187 659.8 490 66.7
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 1.1e-186 657.1 492 64.4
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 1.8e-186 656.4 491 67.0
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 4.0e-186 655.2 490 66.1
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 8.9e-186 654.1 497 64.4
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 1.3e-184 650.2 490 66.3
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 1.7e-184 649.8 482 66.2
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 2.9e-184 649.0 490 66.1
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 3.2e-183 645.6 480 65.4
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 4.1e-183 645.2 501 64.1
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 5.4e-183 644.8 480 65.2
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 1.6e-182 643.3 485 64.7
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 4.6e-182 641.7 490 63.5
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 7.8e-182 641.0 495 65.1
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 3.9e-181 638.6 490 63.9
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 6.6e-181 637.9 494 64.0
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 8.6e-181 637.5 496 65.5
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 8.6e-181 637.5 490 65.7
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 9.5e-180 634.0 497 62.2
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 1.6e-179 633.3 498 63.5
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 4.7e-179 631.7 491 64.8
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 1.1e-178 630.6 491 63.5
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.8e-178 629.8 499 63.7
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 1.5e-177 626.7 496 61.9
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 2.6e-177 625.9 534 61.0
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 2.9e-176 622.5 471 65.6
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 4.6e-174 615.1 475 68.4
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 3.0e-173 612.5 499 63.7
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 3.0e-173 612.5 488 62.3
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 5.1e-173 611.7 468 63.7
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 2.5e-172 609.4 491 62.9
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 4.3e-172 608.6 517 59.4
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 5.6e-172 608.2 492 61.4
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 9.6e-172 607.4 489 62.6
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 2.1e-171 606.3 496 60.7
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 1.1e-170 604.0 496 60.9
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 1.4e-170 603.6 512 60.7
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 3.1e-170 602.4 491 61.5
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 8.9e-170 600.9 491 61.5
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 2.2e-168 596.3 500 63.6
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 3.8e-168 595.5 493 60.6
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 4.9e-168 595.1 498 61.2
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 6.4e-168 594.7 490 61.0
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 1.4e-167 593.6 493 59.4
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 3.2e-167 592.4 490 59.4
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 4.2e-167 592.0 487 60.4
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 3.5e-166 589.0 503 59.4
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 1.0e-165 587.4 497 59.4
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 1.7e-165 586.6 497 59.0
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 2.3e-165 586.3 481 61.5
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 2.5e-164 582.8 493 56.8
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 2.5e-164 582.8 497 61.0
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 7.3e-164 581.3 495 59.2
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 1.3e-163 580.5 506 58.5
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 2.1e-163 579.7 491 57.4
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 6.2e-163 578.2 453 63.4
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 2.4e-162 576.2 442 63.6
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 9.0e-162 574.3 453 63.1
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 1.2e-161 573.9 497 58.4
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 1.2e-161 573.9 497 58.4
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 2.6e-161 572.8 472 59.7
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 5.8e-161 571.6 495 59.8
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 9.9e-161 570.9 528 57.0
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 3.8e-160 568.9 494 58.7
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 8.4e-160 567.8 465 62.2
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 8.4e-160 567.8 490 59.6
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 1.4e-159 567.0 498 58.4
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 1.6e-158 563.5 497 58.4
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 1.0e-157 560.8 493 56.4
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 3.0e-157 559.3 451 62.1
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 2.5e-156 556.2 503 56.7
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 5.6e-156 555.1 491 57.2
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 7.3e-156 554.7 452 61.7
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 2.1e-155 553.1 497 56.1
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 3.1e-154 549.3 499 55.9
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 1.2e-153 547.4 471 57.7
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 1.2e-153 547.4 498 56.4
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 3.8e-152 542.3 509 56.0
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 1.1e-151 540.8 497 55.5
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 3.2e-151 539.3 505 55.8
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 4.3e-148 528.9 495 56.4
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 2.7e-142 509.6 512 52.0
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 2.5e-140 503.1 433 59.6
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 1.3e-133 480.7 522 51.9
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 3.0e-133 479.6 513 52.4
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 2.5e-127 459.9 316 71.2
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 6.1e-126 455.3 585 44.8
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 1.2e-121 441.0 557 43.1
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 1.5e-121 440.7 498 48.6
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 3.4e-121 439.5 420 56.4
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 8.8e-117 424.9 495 47.3
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 5.5e-111 405.6 351 60.4
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 4.1e-106 389.4 311 63.0
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 2.1e-102 377.1 316 59.5
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 4.1e-98 362.8 491 43.4
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 1.7e-96 357.5 467 43.3
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 2.4e-82 310.5 289 56.1
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 7.5e-68 262.3 312 49.7
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 1.3e-59 235.0 332 39.5
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 2.1e-57 227.6 142 74.6
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 3.5e-57 226.9 381 34.1
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 1.7e-48 198.0 711 26.3
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 4.8e-38 163.3 344 32.0
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 9.3e-34 149.1 95 72.6
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 4.3e-31 140.2 116 58.6
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 1.8e-24 118.2 139 49.6
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 3.0e-24 117.5 75 74.7
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 4.2e-18 97.1 139 41.0
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 1.7e-06 58.5 122 32.8
arahy.Tifrunner.gnm1.ann1.UTA44Z Arachis hypogaea HOM05D006341 ORTHO05D000377 6.3e-06 56.6 31 80.6


User provided reference genes

Program Settings