Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G29204 Trifolium pratense HOM05D000203 ORTHO05D000135 4.5e-49 197.6 99 100.0
TPR.G12455 Trifolium pratense HOM05D000203 ORTHO05D000135 6.8e-21 104.0 88 58.0
TPR.G28086 Trifolium pratense HOM05D000203 ORTHO05D000135 1.2e-20 103.2 78 61.5
TPR.G11427 Trifolium pratense HOM05D000203 ORTHO05D000135 1.4e-18 96.3 74 58.1
Psat6g211280 Pisum sativum HOM05D000203 ORTHO05D000135 1.7e-16 89.4 89 51.7
Medtr1g106070 Medicago truncatula HOM05D000203 ORTHO05D000135 3.0e-16 88.6 89 48.3
Ca_11013_v3 Cicer arietinum L. HOM05D000203 ORTHO05D000135 1.5e-15 86.3 89 49.4
Medtr3g052920 Medicago truncatula HOM05D000203 ORTHO05D000135 7.3e-15 84.0 89 47.2
Ca_11011_v3 Cicer arietinum L. HOM05D000203 ORTHO05D000135 1.6e-14 82.8 75 52.0
Medtr1g105920 Medicago truncatula HOM05D000203 ORTHO05D000135 2.1e-14 82.4 89 48.3
Medtr2g030740 Medicago truncatula HOM05D000203 ORTHO05D000135 1.1e-13 80.1 89 44.9
Medtr8g043650 Medicago truncatula HOM05D000203 ORTHO05D000135 1.4e-13 79.7 89 46.1
Medtr1g105910 Medicago truncatula HOM05D000203 ORTHO05D000135 1.8e-13 79.3 87 47.1
Ca_11009_v3 Cicer arietinum L. HOM05D000203 ORTHO05D000135 5.8e-12 74.3 89 43.8
Medtr1g012570 Medicago truncatula HOM05D000203 ORTHO05D000135 5.8e-12 74.3 89 43.8
Ca_11010_v3 Cicer arietinum L. HOM05D000203 ORTHO05D000135 7.5e-12 73.9 87 44.8
Medtr7g062350 Medicago truncatula HOM05D000203 ORTHO05D000135 9.9e-12 73.6 89 44.9
TPR.G16090 Trifolium pratense HOM05D000203 ORTHO05D000135 1.3e-11 73.2 80 47.5
Medtr1g105905 Medicago truncatula HOM05D000203 ORTHO05D000135 1.7e-11 72.8 86 44.2
TPR.G24469 Trifolium pratense HOM05D000203 ORTHO05D000135 2.2e-11 72.4 91 42.9
Psat6g212440 Pisum sativum HOM05D000203 ORTHO05D000135 2.9e-11 72.0 83 43.4
Psat6g223480 Pisum sativum HOM05D000203 ORTHO05D000135 3.7e-11 71.6 89 41.6
Medtr1g108510 Medicago truncatula HOM05D000203 ORTHO05D000135 6.4e-11 70.9 89 44.9
Medtr3g030770 Medicago truncatula HOM05D000203 ORTHO05D000135 1.1e-10 70.1 89 44.9
Psat6g223360 Pisum sativum HOM05D000203 ORTHO05D000135 1.4e-10 69.7 93 40.9
Psat6g212400 Pisum sativum HOM05D000203 ORTHO05D000135 1.9e-10 69.3 74 43.2
Prupe.8G151900 Prunus persica HOM05D000203 ORTHO05D000135 1.9e-10 69.3 82 40.2
Medtr1g075600 Medicago truncatula HOM05D000203 ORTHO05D000135 4.1e-10 68.2 89 41.6
Medtr1g075570 Medicago truncatula HOM05D000203 ORTHO05D000135 5.4e-10 67.8 89 41.6
RcHm_v2.0_Chr6g0247811 Rosa chinensis HOM05D000203 ORTHO05D000135 5.4e-10 67.8 71 45.1
TPR.G11546 Trifolium pratense HOM05D000203 ORTHO05D000135 7.1e-10 67.4 96 43.8
Psat6g223400 Pisum sativum HOM05D000203 ORTHO05D000135 9.2e-10 67.0 95 37.9
Psat6g223520 Pisum sativum HOM05D000203 ORTHO05D000135 9.2e-10 67.0 87 40.2
Sed0009196 Sechium edule HOM05D000203 ORTHO05D000135 9.2e-10 67.0 90 38.9
VMungo0720G2484 Vigna mungo HOM05D000203 ORTHO05D000135 9.2e-10 67.0 80 41.2
Psat6g210800 Pisum sativum HOM05D000203 ORTHO05D000135 1.6e-09 66.2 91 45.1
Psat6g210840 Pisum sativum HOM05D000203 ORTHO05D000135 1.6e-09 66.2 84 46.4
Atru.chr6.1457 Acer truncatum HOM05D000203 ORTHO05D000135 2.1e-09 65.9 70 42.9
Medtr2g093190 Medicago truncatula HOM05D000203 ORTHO05D000135 2.1e-09 65.9 89 43.8
MELO3C018030.2 Cucumis melo HOM05D000203 ORTHO05D000135 2.7e-09 65.5 89 38.2
CsaV3_4G000010 Cucumis sativus L. HOM05D000203 ORTHO05D000135 2.7e-09 65.5 89 38.2
Psat6g223440 Pisum sativum HOM05D000203 ORTHO05D000135 2.7e-09 65.5 89 40.4
Psat6g213480 Pisum sativum HOM05D000203 ORTHO05D000135 3.5e-09 65.1 84 47.6
ClCG10G009960 Citrullus lanatus HOM05D000203 ORTHO05D000135 4.6e-09 64.7 90 37.8
Medtr1g108580 Medicago truncatula HOM05D000203 ORTHO05D000135 4.6e-09 64.7 89 42.7
QL11p028776 Quercus lobata HOM05D000203 ORTHO05D000135 6.0e-09 64.3 70 44.3
Ca_11012_v3 Cicer arietinum L. HOM05D000203 ORTHO05D000135 7.8e-09 63.9 69 44.9
Medtr1g077360 Medicago truncatula HOM05D000203 ORTHO05D000135 7.8e-09 63.9 86 43.0
Glyma.20G136500 Glycine max HOM05D000203 ORTHO05D000135 1.0e-08 63.5 87 39.1
Glyma.10G254800 Glycine max HOM05D000203 ORTHO05D000135 1.3e-08 63.2 87 37.9
Gohir.D02G235000 Gossypium hirsutum HOM05D000203 ORTHO05D000135 1.3e-08 63.2 86 36.0
Gorai.005G263100 Gossypium raimondii HOM05D000203 ORTHO05D000135 1.3e-08 63.2 86 36.0
Medtr5g053390 Medicago truncatula HOM05D000203 ORTHO05D000135 1.3e-08 63.2 83 43.4
TPR.G24459 Trifolium pratense HOM05D000203 ORTHO05D000135 1.3e-08 63.2 89 38.2
TPR.G34133 Trifolium pratense HOM05D000203 ORTHO05D000135 1.3e-08 63.2 85 40.0
FAN15G2402 Fragaria x ananassa HOM05D000203 ORTHO05D000135 1.7e-08 62.8 76 40.8
FAN24G1168 Fragaria x ananassa HOM05D000203 ORTHO05D000135 1.7e-08 62.8 76 40.8
Gohir.A03G213500 Gossypium hirsutum HOM05D000203 ORTHO05D000135 1.7e-08 62.8 83 36.1
Medtr2g085250 Medicago truncatula HOM05D000203 ORTHO05D000135 1.7e-08 62.8 89 39.3
Medtr2g085280 Medicago truncatula HOM05D000203 ORTHO05D000135 1.7e-08 62.8 89 39.3
Medtr0121s0080 Medicago truncatula HOM05D000203 ORTHO05D000135 2.3e-08 62.4 93 37.6
Ciclev10030142m.g Citrus clementina HOM05D000203 ORTHO05D000135 3.0e-08 62.0 63 46.0
COL.COLO4_17800 Corchorus olitorius HOM05D000203 ORTHO05D000135 3.0e-08 62.0 77 35.1
Sed0020653 Sechium edule HOM05D000203 ORTHO05D000135 3.0e-08 62.0 90 38.9
FvH4_2g03020 Fragaria vesca HOM05D000203 ORTHO05D000135 3.9e-08 61.6 76 39.5
Gohir.A01G180850 Gossypium hirsutum HOM05D000203 ORTHO05D000135 3.9e-08 61.6 82 34.1
Gohir.D01G171950 Gossypium hirsutum HOM05D000203 ORTHO05D000135 3.9e-08 61.6 82 34.1
Gorai.002G213500 Gossypium raimondii HOM05D000203 ORTHO05D000135 3.9e-08 61.6 82 34.1
Psat6g212320 Pisum sativum HOM05D000203 ORTHO05D000135 3.9e-08 61.6 71 46.5
TPR.G9054 Trifolium pratense HOM05D000203 ORTHO05D000135 3.9e-08 61.6 86 39.5
Glyma.20G136700 Glycine max HOM05D000203 ORTHO05D000135 5.1e-08 61.2 81 35.8
Psat6g213000 Pisum sativum HOM05D000203 ORTHO05D000135 5.1e-08 61.2 84 45.2
FAN27G2405 Fragaria x ananassa HOM05D000203 ORTHO05D000135 8.6e-08 60.5 82 35.4
FvH4_2g03030 Fragaria vesca HOM05D000203 ORTHO05D000135 1.5e-07 59.7 82 35.4
Glyma.10G254600 Glycine max HOM05D000203 ORTHO05D000135 1.5e-07 59.7 81 35.8
Phvul.001G186400 Phaseolus vulgaris HOM05D000203 ORTHO05D000135 1.5e-07 59.7 94 33.0
Psat6g210720 Pisum sativum HOM05D000203 ORTHO05D000135 1.5e-07 59.7 84 45.2
Psat6g211520 Pisum sativum HOM05D000203 ORTHO05D000135 1.5e-07 59.7 84 45.2
Phvul.007G048000 Phaseolus vulgaris HOM05D000203 ORTHO05D000135 1.9e-07 59.3 80 35.0
TPR.G7571 Trifolium pratense HOM05D000203 ORTHO05D000135 2.5e-07 58.9 75 38.7
Duzib052G0982 Durio zibethinus HOM05D000203 ORTHO05D000135 3.3e-07 58.5 86 33.7
Psat5g108920 Pisum sativum HOM05D000203 ORTHO05D000135 3.3e-07 58.5 89 31.5
Phvul.007G266800 Phaseolus vulgaris HOM05D000203 ORTHO05D000135 4.3e-07 58.2 73 35.6
THA.LOC104826501 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 4.3e-07 58.2 72 38.9
TWI75G1001 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 4.3e-07 58.2 82 34.1
VMungo0720G3107 Vigna mungo HOM05D000203 ORTHO05D000135 4.3e-07 58.2 80 35.0
Psat6g213560 Pisum sativum HOM05D000203 ORTHO05D000135 5.6e-07 57.8 62 48.4
Potri.017G047300 Populus trichocarpa HOM05D000203 ORTHO05D000135 5.6e-07 57.8 85 35.3
Prupe.8G152000 Prunus persica HOM05D000203 ORTHO05D000135 5.6e-07 57.8 83 33.7
TPR.G24463 Trifolium pratense HOM05D000203 ORTHO05D000135 5.6e-07 57.8 89 37.1
Actinidia00343 Actinidia chinensis HOM05D001079 ORTHO05D000135 9.5e-07 57.0 81 34.6
arahy.Tifrunner.gnm1.ann1.DFLA7H Arachis hypogaea HOM05D000203 ORTHO05D000135 9.5e-07 57.0 81 38.3
Lj9C337T6 Lonicera japonica HOM05D000203 ORTHO05D000135 9.5e-07 57.0 89 32.6
RcHm_v2.0_Chr6g0247821 Rosa chinensis HOM05D000203 ORTHO05D000135 9.5e-07 57.0 89 37.1
Sabra17G0031900 Salix brachista HOM05D000203 ORTHO05D000135 9.5e-07 57.0 90 34.4
TWI36G0397 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 9.5e-07 57.0 90 33.3
MD10G1112300 Malus domestica HOM05D000203 ORTHO05D000135 1.2e-06 56.6 80 35.0
Manes.07G051700 Manihot esculenta HOM05D000203 ORTHO05D000135 1.2e-06 56.6 90 33.3
THA.LOC104809103 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 1.2e-06 56.6 87 36.8
Eucgr.I02506 Eucalyptus grandis HOM05D000203 ORTHO05D000135 1.6e-06 56.2 86 30.2
Manes.10G086700 Manihot esculenta HOM05D000203 ORTHO05D000135 1.6e-06 56.2 81 35.8
Manes.10G100400 Manihot esculenta HOM05D000203 ORTHO05D000135 1.6e-06 56.2 82 32.9
Peaxi162Scf00249g00064 Petunia axillaris HOM05D000203 ORTHO05D000135 1.6e-06 56.2 80 33.8
Sabra07G0092900 Salix brachista HOM05D000203 ORTHO05D000135 1.6e-06 56.2 85 36.5
Thecc.02G031900 Theobroma cacao HOM05D000203 ORTHO05D000135 1.6e-06 56.2 74 39.2
Atru.chr12.1516 Acer truncatum HOM05D000203 ORTHO05D000135 2.1e-06 55.8 89 36.0
Dinv12564 Davidia involucrata HOM05D000203 ORTHO05D000135 2.1e-06 55.8 88 34.1
TWI59G1079 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 2.1e-06 55.8 85 32.9
Lalb_Chr02g0160301 Lupinus albus HOM05D000203 ORTHO05D000135 2.8e-06 55.5 68 39.7
SalBow6G2350 Salvia bowleyana HOM05D000203 ORTHO05D000135 2.8e-06 55.5 83 36.1
SalBow6G5616 Salvia bowleyana HOM05D000203 ORTHO05D000135 2.8e-06 55.5 83 36.1
arahy.Tifrunner.gnm1.ann1.D8S9UG Arachis hypogaea HOM05D000203 ORTHO05D000135 3.6e-06 55.1 81 37.0
Lalb_Chr02g0145251 Lupinus albus HOM05D000203 ORTHO05D000135 3.6e-06 55.1 85 40.0
Lalb_Chr02g0160321 Lupinus albus HOM05D000203 ORTHO05D000135 3.6e-06 55.1 96 35.4
Potri.007G113800 Populus trichocarpa HOM05D000203 ORTHO05D000135 3.6e-06 55.1 87 33.3
SGA_v2.0_scaffold32G12977 Striga asiatica HOM05D000203 ORTHO05D000135 3.6e-06 55.1 78 38.5
Ciclev10030387m.g Citrus clementina HOM05D000203 ORTHO05D000135 4.7e-06 54.7 82 32.9
GSVIVG01037024001 Vitis vinifera HOM05D000203 ORTHO05D000135 4.7e-06 54.7 82 34.1
GSVIVG01037031001 Vitis vinifera HOM05D000203 ORTHO05D000135 4.7e-06 54.7 93 34.4
Atru.chr12.1519 Acer truncatum HOM05D000203 ORTHO05D000135 6.2e-06 54.3 89 34.8
TPR.G3858 Trifolium pratense HOM05D000203 ORTHO05D000135 6.2e-06 54.3 83 28.9
TWI59G0613 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 6.2e-06 54.3 74 32.4
VMungo0720G1003 Vigna mungo HOM05D000203 ORTHO05D000135 6.2e-06 54.3 80 31.2
GSVIVG01010221001 Vitis vinifera HOM05D000203 ORTHO05D000135 6.2e-06 54.3 69 36.2
Cpa.g.c37107 Carica papaya HOM05D000203 ORTHO05D000135 8.1e-06 53.9 82 35.4
Cfa004714 Carpinus fangiana HOM05D000203 ORTHO05D000135 8.1e-06 53.9 63 41.3
CiPaw.05G021900 Carya illinoinensis HOM05D000203 ORTHO05D000135 8.1e-06 53.9 83 33.7
Duzib132G0148 Durio zibethinus HOM05D000203 ORTHO05D000135 8.1e-06 53.9 84 36.9
Lalb_Chr02g0160311 Lupinus albus HOM05D000203 ORTHO05D000135 8.1e-06 53.9 77 37.7
Medtr5g055100 Medicago truncatula HOM05D000203 ORTHO05D000135 8.1e-06 53.9 89 36.0
TWI81G0246 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 8.1e-06 53.9 83 36.1


User provided reference genes

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