Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 2.3e-91 339.3 241 100.0
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 8.7e-62 241.1 227 88.1
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 1.8e-51 206.8 228 81.6
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 2.4e-51 206.5 230 80.4
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 5.3e-51 205.3 227 81.5
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 5.3e-51 205.3 226 80.5
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 1.7e-49 200.3 226 79.2
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 3.8e-49 199.1 231 78.4
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 4.9e-49 198.7 231 79.2
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 4.2e-48 195.7 227 77.5
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 1.3e-46 190.7 246 74.0
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 1.5e-42 177.2 216 74.5
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 1.5e-42 177.2 224 71.4
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 4.5e-42 175.6 221 69.7
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 2.2e-41 173.3 219 73.1
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 2.9e-41 172.9 184 84.2
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 2.9e-41 172.9 231 73.2
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 5.0e-41 172.2 229 72.9
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 5.0e-41 172.2 233 72.1
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 5.0e-41 172.2 237 70.9
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 6.5e-41 171.8 185 83.2
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 8.5e-41 171.4 234 72.6
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 1.1e-40 171.0 241 68.9
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 1.1e-40 171.0 171 81.3
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 3.2e-40 169.5 226 70.8
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 4.2e-40 169.1 216 72.7
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 4.2e-40 169.1 170 84.1
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 5.5e-40 168.7 216 72.2
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 5.5e-40 168.7 226 71.7
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 9.3e-40 167.9 216 65.7
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 9.3e-40 167.9 226 71.2
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 1.6e-39 167.2 215 74.0
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 2.1e-39 166.8 227 71.4
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 2.1e-39 166.8 227 73.1
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 2.7e-39 166.4 203 76.4
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 3.6e-39 166.0 230 73.0
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 3.6e-39 166.0 216 69.4
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 7.9e-39 164.9 216 71.3
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 7.9e-39 164.9 197 80.2
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 3.0e-38 162.9 226 71.7
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 3.0e-38 162.9 217 71.4
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 3.9e-38 162.5 238 71.0
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 3.9e-38 162.5 207 74.9
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 5.1e-38 162.2 167 85.6
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 6.7e-38 161.8 231 69.3
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 6.7e-38 161.8 229 71.6
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 1.9e-37 160.2 218 68.8
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 5.7e-37 158.7 171 83.0
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 7.4e-37 158.3 239 68.2
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 7.4e-37 158.3 165 83.6
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 2.2e-36 156.8 204 70.1
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 2.2e-36 156.8 193 79.8
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 6.3e-36 155.2 231 66.7
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 6.3e-36 155.2 171 80.7
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 6.3e-36 155.2 213 73.2
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 6.3e-36 155.2 177 74.0
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 8.2e-36 154.8 182 78.0
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 1.1e-35 154.5 215 63.7
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 4.1e-35 152.5 227 68.7
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 5.3e-35 152.1 185 79.5
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 6.9e-35 151.8 206 71.4
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 9.0e-35 151.4 169 81.7
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 4.5e-34 149.1 169 81.1
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 5.9e-34 148.7 174 82.2
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 1.0e-33 147.9 165 83.0
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 1.7e-33 147.1 200 73.5
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 2.9e-33 146.4 172 76.2
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 5.0e-33 145.6 169 81.1
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 1.4e-32 144.1 162 82.7
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 4.2e-32 142.5 222 68.5
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 2.7e-31 139.8 213 67.1
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 3.6e-31 139.4 231 62.3
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 3.6e-31 139.4 231 62.3
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 3.6e-31 139.4 231 62.3
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 4.6e-31 139.0 190 56.8
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 7.9e-31 138.3 208 69.7
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 1.4e-30 137.5 211 69.7
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 1.4e-30 137.5 142 92.3
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 1.4e-30 137.5 113 77.9
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 2.3e-30 136.7 226 65.5
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 6.7e-30 135.2 201 71.6
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 6.7e-30 135.2 228 66.2
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 8.8e-30 134.8 144 90.3
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 2.0e-29 133.7 156 78.8
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 9.7e-29 131.3 220 63.2
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 3.7e-28 129.4 232 62.1
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 6.3e-28 128.6 226 59.3
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 1.4e-27 127.5 220 62.3
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 2.4e-27 126.7 220 61.8
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 2.4e-27 126.7 152 82.2
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 4.1e-27 125.9 169 66.3
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 9.1e-27 124.8 228 60.5
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 1.0e-25 121.3 171 74.3
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 3.8e-25 119.4 170 71.8
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 5.0e-25 119.0 173 71.7
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 5.0e-25 119.0 165 68.5
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 8.8e-22 108.2 56 89.3
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 9.7e-21 104.8 175 62.9
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 1.7e-20 104.0 240 46.7
Atru.BG.275.p Acer truncatum HOM05D006605 ORTHO05D008277 6.3e-20 102.1 126 89.7
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 3.5e-18 96.3 50 90.0
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 1.0e-17 94.7 171 68.4
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 1.3e-17 94.4 117 54.7
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 1.7e-17 94.0 118 54.2
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 1.1e-16 91.3 172 68.0
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 5.5e-16 89.0 95 56.8
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 3.6e-15 86.3 111 54.1
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 3.3e-13 79.7 58 72.4
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 9.7e-13 78.2 180 64.4
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 4.8e-12 75.9 38 89.5
AUR62040704 Chenopodium quinoa HOM05D006605 ORTHO05D008277 1.1e-11 74.7 38 86.8
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 1.8e-11 73.9 56 73.2
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 7.0e-11 72.0 112 44.6
CDE02G3683 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 8.5e-09 65.1 40 72.5
Cre16.g687300 Chlamydomonas reinhardtii HOM05D006605 ORTHO05D008277 7.2e-08 62.0 56 55.4
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 8.0e-07 58.5 70 47.1


User provided reference genes

Program Settings