Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27996 Trifolium pratense HOM05D000451 ORTHO05D000351 1.0e-35 152.9 78 100.0
Ca_03283_v3 Cicer arietinum L. HOM05D000451 ORTHO05D000351 4.7e-17 90.9 63 76.2
Ca_30288_v3 Cicer arietinum L. HOM05D000451 ORTHO05D000351 4.7e-17 90.9 63 76.2
TPR.G2415 Trifolium pratense HOM05D000451 ORTHO05D000351 3.4e-15 84.7 61 72.1
TPR.G4023 Trifolium pratense HOM05D000451 ORTHO05D000351 6.3e-14 80.5 69 62.3
Medtr1g069565 Medicago truncatula HOM05D000451 ORTHO05D000351 1.8e-13 79.0 59 69.5
Medtr1g114130 Medicago truncatula HOM05D000451 ORTHO05D000351 1.8e-13 79.0 61 67.2
Ca_11217_v3 Cicer arietinum L. HOM05D000451 ORTHO05D000351 5.4e-13 77.4 61 65.6
Medtr1g114070 Medicago truncatula HOM05D000451 ORTHO05D000351 5.4e-13 77.4 69 63.8
TPR.G21299 Trifolium pratense HOM05D000451 ORTHO05D000351 1.6e-12 75.9 59 66.1
Psat6g233040 Pisum sativum HOM05D000451 ORTHO05D000351 5.9e-12 73.9 68 60.3
TPR.G4095 Trifolium pratense HOM05D000451 ORTHO05D000351 5.9e-12 73.9 67 62.7
Lj5g0013520 Lotus japonicus HOM05D000451 ORTHO05D000351 2.3e-11 72.0 69 63.8
Medtr1g114150 Medicago truncatula HOM05D000451 ORTHO05D000351 6.6e-11 70.5 62 61.3
Psat6g233400 Pisum sativum HOM05D000451 ORTHO05D000351 6.6e-11 70.5 61 63.9
Lj3g0005039 Lotus japonicus HOM05D000451 ORTHO05D000351 1.1e-10 69.7 65 60.0
Phvul.007G016300 Phaseolus vulgaris HOM05D000451 ORTHO05D000351 5.6e-10 67.4 61 60.7
VMungo0720G0380 Vigna mungo HOM05D000451 ORTHO05D000351 1.4e-08 62.8 61 60.7
Glyma.20G104900 Glycine max HOM05D000451 ORTHO05D000351 2.3e-08 62.0 61 55.7
Glyma.19G068800 Glycine max HOM05D000451 ORTHO05D000351 3.1e-08 61.6 63 55.6
Lj5g0010085 Lotus japonicus HOM05D000451 ORTHO05D000351 4.0e-08 61.2 51 64.7
Glyma.19G064000 Glycine max HOM05D000451 ORTHO05D000351 5.2e-08 60.8 59 55.9
TWI38G0741 Tripterygium wilfordii HOM05D000451 ORTHO05D000351 5.2e-08 60.8 63 49.2
Glyma.10G284500 Glycine max HOM05D000451 ORTHO05D000351 6.8e-08 60.5 61 54.1
AUR62032964 Chenopodium quinoa HOM05D000451 ORTHO05D000351 8.9e-08 60.1 63 44.4
TAR629G3409 Trochodendron aralioides HOM05D000451 ORTHO05D000351 8.9e-08 60.1 62 53.2
QL04p072951 Quercus lobata HOM05D000451 ORTHO05D000351 1.2e-07 59.7 70 45.7
arahy.Tifrunner.gnm1.ann1.1GV9MA Arachis hypogaea HOM05D000451 ORTHO05D000351 2.0e-07 58.9 52 59.6
Manes.11G102400 Manihot esculenta HOM05D000451 ORTHO05D000351 2.6e-07 58.5 63 44.4
arahy.Tifrunner.gnm1.ann1.991T1P Arachis hypogaea HOM05D000451 ORTHO05D000351 3.4e-07 58.2 64 50.0
QL04p072824 Quercus lobata HOM05D000451 ORTHO05D000351 3.4e-07 58.2 70 45.7
Phvul.003G031500 Phaseolus vulgaris HOM05D000451 ORTHO05D000351 4.4e-07 57.8 58 53.4
Prupe.2G123400 Prunus persica HOM05D000451 ORTHO05D000351 4.4e-07 57.8 60 51.7
VMungo0647G1424 Vigna mungo HOM05D000451 ORTHO05D000351 7.5e-07 57.0 59 57.6
Haze_03469 Corylus avellana HOM05D000451 ORTHO05D000351 9.8e-07 56.6 53 54.7
Haze_25319 Corylus avellana HOM05D000451 ORTHO05D000351 9.8e-07 56.6 50 54.0
TAR371G0398 Trochodendron aralioides HOM05D000451 ORTHO05D000351 9.8e-07 56.6 59 54.2
TWI38G0519 Tripterygium wilfordii HOM05D000451 ORTHO05D000351 1.3e-06 56.2 60 46.7
Manes.14G044400 Manihot esculenta HOM05D000451 ORTHO05D000351 1.7e-06 55.8 63 44.4
TPR.G24608 Trifolium pratense HOM05D000451 ORTHO05D000351 1.7e-06 55.8 45 64.4
arahy.Tifrunner.gnm1.ann1.9S6AA1 Arachis hypogaea HOM05D000451 ORTHO05D000351 2.2e-06 55.5 48 62.5
Lalb_Chr18g0049491 Lupinus albus HOM05D000451 ORTHO05D000351 2.2e-06 55.5 57 54.4
Medtr5g047620 Medicago truncatula HOM05D000451 ORTHO05D000351 2.2e-06 55.5 62 53.2
Medtr5g065200 Medicago truncatula HOM05D000451 ORTHO05D000351 2.2e-06 55.5 61 50.8
FvH4_7g09571 Fragaria vesca HOM05D000451 ORTHO05D000351 2.9e-06 55.1 62 48.4
Lalb_Chr18g0049541 Lupinus albus HOM05D000451 ORTHO05D000351 2.9e-06 55.1 57 56.1
Lalb_Chr18g0049651 Lupinus albus HOM05D000451 ORTHO05D000351 2.9e-06 55.1 57 56.1
CiPaw.15G150500 Carya illinoinensis HOM05D000451 ORTHO05D000351 3.7e-06 54.7 67 41.8
Migut.A00948 Erythranthe guttata HOM05D000451 ORTHO05D000351 3.7e-06 54.7 65 43.1
RcHm_v2.0_Chr1g0346431 Rosa chinensis HOM05D000451 ORTHO05D000351 3.7e-06 54.7 62 48.4
arahy.Tifrunner.gnm1.ann1.JYC97M Arachis hypogaea HOM05D000451 ORTHO05D000351 4.9e-06 54.3 64 50.0
Migut.A00947 Erythranthe guttata HOM05D000451 ORTHO05D000351 4.9e-06 54.3 62 45.2
Rhsim05G0169400 Rhododendron simsii HOM05D000451 ORTHO05D000351 4.9e-06 54.3 69 37.7
Dinv08027 Davidia involucrata HOM05D000451 ORTHO05D000351 6.4e-06 53.9 60 45.0
Medtr0020s0100 Medicago truncatula HOM05D000451 ORTHO05D000351 6.4e-06 53.9 57 57.9
Potri.005G091200 Populus trichocarpa HOM05D000451 ORTHO05D000351 6.4e-06 53.9 69 39.1
ClCG01G008180 Citrullus lanatus HOM05D000451 ORTHO05D000351 8.3e-06 53.5 70 38.6
Cc00_g07370 Coffea canephora HOM05D000451 ORTHO05D000351 8.3e-06 53.5 45 60.0


User provided reference genes

Program Settings