Gene: Lj5g0010085

General Information

Structural Information

  • Species Lotus japonicus
  • Gene Identifier Lj5g0010085
  • Transcript Identifier Lj5g0010085.1
  • Gene Type Coding gene
  • Location chr5 : 1248069-1266541 : negative

Gene Family Information

  • ID HOM05D000451
  • #Genes/#Species 1160/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lj5g0010085.Lj1.0v1
  • pacid 44925184

Descriptions

  • Description K15601 - lysine-specific demethylase 3 [EC:1.14.11.-] (KDM3)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033169
IEA
InterProhistone H3-K9 demethylation
GO:0070919
ISO
PLAZA Integrative Orthologyproduction of siRNA involved in chromatin silencing by small RNA AT3G07610
GO:0060969
ISO
PLAZA Integrative Orthologynegative regulation of gene silencing AT3G07610
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT3G07610
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT3G07610
GO:0080188
ISO
PLAZA Integrative Orthologygene silencing by RNA-directed DNA methylation AT3G07610
GO:0010468
ISO
PLAZA Integrative Orthologyregulation of gene expression AT3G07610
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT3G07610
GO:0032776
ISO
PLAZA Integrative OrthologyDNA methylation on cytosine AT3G07610

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032454
IEA
InterProhistone demethylase activity (H3-K9 specific)
GO:0031490
ISO
PLAZA Integrative Orthologychromatin DNA binding AT3G07610

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003347 JmjC domain
IPR045109 Histone demethylase JHDM2-like
IPR018866 Zinc-finger domain of monoamine-oxidase A repressor R1
Mapman id Description
12.3.3.8.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (KDM3)