Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27910 Trifolium pratense HOM05D009128 ORTHO05D011389 3.2e-145 518.5 273 100.0
Ca_12697_v3 Cicer arietinum L. HOM05D009128 ORTHO05D011389 6.2e-64 248.4 202 64.9
Ca_03767_v3 Cicer arietinum L. HOM05D009128 ORTHO05D011389 9.5e-57 224.6 196 60.7
Peaxi162Scf00206g01515 Petunia axillaris HOM05D009128 ORTHO05D011389 3.4e-54 216.1 200 60.0
Ca_28512_v3 Cicer arietinum L. HOM05D009128 ORTHO05D011389 1.6e-51 207.2 172 61.6
Peaxi162Scf00116g00003 Petunia axillaris HOM05D009128 ORTHO05D011389 1.0e-50 204.5 207 56.5
Peaxi162Scf00238g00610 Petunia axillaris HOM05D009128 ORTHO05D011389 3.9e-50 202.6 207 56.5
Ca_23710_v3 Cicer arietinum L. HOM05D009128 ORTHO05D011389 6.4e-45 185.3 131 70.2
Ca_31240_v3 Cicer arietinum L. HOM05D009128 ORTHO05D011389 1.1e-44 184.5 205 52.7
Ca_28195_v3 Cicer arietinum L. HOM05D009128 ORTHO05D011389 1.9e-44 183.7 173 57.2
Peaxi162Scf01294g00128 Petunia axillaris HOM05D009128 ORTHO05D011389 4.6e-43 179.1 203 52.7
Peaxi162Scf00299g00004 Petunia axillaris HOM05D009128 ORTHO05D011389 6.0e-43 178.7 196 52.6
Lalb_Chr21g0312571 Lupinus albus HOM05D009128 ORTHO05D011389 3.8e-37 159.5 226 42.5
Solyc04g024880.3 Solanum lycopersicum HOM05D009128 ORTHO05D011389 2.3e-34 150.2 198 47.5
Ca_14150_v3 Cicer arietinum L. HOM05D009128 ORTHO05D011389 2.2e-29 133.7 196 43.9
Ca_05874_v3 Cicer arietinum L. HOM05D009128 ORTHO05D011389 5.4e-28 129.0 144 52.8
Peaxi162Scf00304g00124 Petunia axillaris HOM05D009128 ORTHO05D011389 7.6e-22 108.6 126 50.0
Medtr4g026570 Medicago truncatula HOM05D009128 ORTHO05D011389 1.4e-20 104.4 125 46.4
Peaxi162Scf00085g00185 Petunia axillaris HOM05D009128 ORTHO05D011389 6.7e-18 95.5 120 51.7
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 2.8e-16 90.1 187 33.7
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 3.7e-16 89.7 187 32.6
Ca_28394_v3 Cicer arietinum L. HOM05D009128 ORTHO05D011389 1.1e-15 88.2 58 72.4
arahy.Tifrunner.gnm1.ann1.0Q01G3 Arachis hypogaea HOM05D002954 ORTHO05D003353 4.1e-15 86.3 187 32.6
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 5.3e-15 85.9 161 33.5
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 9.0e-15 85.1 214 28.0
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 2.0e-14 84.0 212 31.1
arahy.Tifrunner.gnm1.ann1.ZY1J0Y Arachis hypogaea HOM05D002954 ORTHO05D003353 2.6e-14 83.6 194 30.4
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 3.4e-14 83.2 125 36.0
PGSC0003DMG400046551 Solanum tuberosum HOM05D009128 ORTHO05D011389 3.4e-14 83.2 292 31.5
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 4.5e-14 82.8 212 31.1
arahy.Tifrunner.gnm1.ann1.N8CY10 Arachis hypogaea HOM05D009662 ORTHO05D003353 1.0e-13 81.6 134 34.3
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 1.7e-13 80.9 187 32.6
Solyc01g010405.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 5.0e-13 79.3 149 33.6
Peaxi162Scf00138g00153 Petunia axillaris HOM05D009128 ORTHO05D011389 8.4e-13 78.6 108 45.4
Solyc11g044937.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 8.4e-13 78.6 149 33.6
Solyc10g061955.1 Solanum lycopersicum HOM05D009128 ORTHO05D011389 1.1e-12 78.2 61 60.7
arahy.Tifrunner.gnm1.ann1.QKP2RW Arachis hypogaea HOM05D002954 ORTHO05D003353 2.5e-12 77.0 117 35.0
Psat0s2772g0080 Pisum sativum HOM05D002954 ORTHO05D003353 2.5e-12 77.0 173 33.5
Sopen09g020910 Solanum pennellii HOM05D002954 ORTHO05D003353 4.2e-12 76.3 137 29.2
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.3e-12 75.1 138 35.5
Nitab4.5_0000002g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.5e-11 73.2 138 34.8
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 3.5e-11 73.2 112 37.5
Sopen04g020530 Solanum pennellii HOM05D002954 ORTHO05D003353 4.6e-11 72.8 103 40.8
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 4.6e-11 72.8 167 32.3
C01p42640 Brassica napus HOM05D008309 ORTHO05D010308 1.3e-10 71.2 195 30.3
Peaxi162Scf00016g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 1.3e-10 71.2 192 31.2
Peaxi162Scf00173g00019 Petunia axillaris HOM05D002954 ORTHO05D003353 1.3e-10 71.2 192 31.2
arahy.Tifrunner.gnm1.ann1.B3S8NN Arachis hypogaea HOM05D002954 ORTHO05D003353 2.3e-10 70.5 144 31.9
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 2.3e-10 70.5 172 29.7
arahy.Tifrunner.gnm1.ann1.DXNF3X Arachis hypogaea HOM05D002954 ORTHO05D003353 3.0e-10 70.1 176 28.4
COL.COLO4_29219 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.0e-10 70.1 179 31.8
arahy.Tifrunner.gnm1.ann1.C14DTV Arachis hypogaea HOM05D009662 ORTHO05D003353 3.9e-10 69.7 188 29.8
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 3.9e-10 69.7 185 29.2
Psat5g178080 Pisum sativum HOM05D002954 ORTHO05D003353 3.9e-10 69.7 118 37.3
Nitab4.5_0000229g0050 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.1e-10 69.3 123 34.1
Peaxi162Scf00093g00015 Petunia axillaris HOM05D002954 ORTHO05D010308 5.1e-10 69.3 192 30.7
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 6.7e-10 68.9 125 32.8
TWI34G1252 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 8.7e-10 68.6 123 36.6
A05p38910 Brassica napus HOM05D008309 ORTHO05D010308 1.1e-09 68.2 140 33.6
Lj1g0022399 Lotus japonicus HOM05D000107 ORTHO05D000062 1.1e-09 68.2 168 28.0
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-09 68.2 153 31.4
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 1.9e-09 67.4 167 29.9
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 2.5e-09 67.0 186 26.9
arahy.Tifrunner.gnm1.ann1.LE5ID3 Arachis hypogaea HOM05D009662 ORTHO05D003353 2.5e-09 67.0 126 34.9
PGSC0003DMG400036508 Solanum tuberosum HOM05D009128 ORTHO05D011389 4.3e-09 66.2 47 63.8
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 5.7e-09 65.9 117 38.5
BolC2t08113H Brassica oleracea HOM05D008309 ORTHO05D010308 1.6e-08 64.3 151 29.1
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 1.6e-08 64.3 167 29.3
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 2.2e-08 63.9 114 34.2
Ca_03866_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.2e-08 63.9 164 26.2
BolC3t19893H Brassica oleracea HOM05D008309 ORTHO05D010308 3.7e-08 63.2 151 29.1
BolC8t50055H Brassica oleracea HOM05D008309 ORTHO05D010308 3.7e-08 63.2 151 29.1
BraA04t17652Z Brassica rapa HOM05D008309 ORTHO05D010308 3.7e-08 63.2 151 29.1
CiPaw.10G087600 Carya illinoinensis HOM05D001309 ORTHO05D000385 3.7e-08 63.2 115 33.0
Nitab4.5_0000416g0230 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.7e-08 63.2 121 33.9
A09p31580 Brassica napus HOM05D008309 ORTHO05D010308 6.3e-08 62.4 121 32.2
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 6.3e-08 62.4 183 29.5
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 8.2e-08 62.0 115 33.0
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.2e-08 62.0 146 30.8
CAN.G507.10 Capsicum annuum HOM05D009128 ORTHO05D011389 1.1e-07 61.6 51 58.8
Nitab4.5_0000386g0150 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-07 61.6 100 42.0
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 1.4e-07 61.2 169 27.8
CiPaw.09G181600 Carya illinoinensis HOM05D001309 ORTHO05D000385 1.4e-07 61.2 114 32.5
Nitab4.5_0003353g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.4e-07 61.2 88 36.4
arahy.Tifrunner.gnm1.ann1.Y6RTQD Arachis hypogaea HOM05D002954 ORTHO05D010308 4.1e-07 59.7 166 28.9
CAN.G48.14 Capsicum annuum HOM05D001977 ORTHO05D011389 4.1e-07 59.7 47 61.7
Ca_14618_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 4.1e-07 59.7 164 26.2
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.1e-07 59.7 157 28.7
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 4.1e-07 59.7 151 29.1
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 5.3e-07 59.3 113 31.9
Psat0s4310g0080 Pisum sativum HOM05D016237 ORTHO05D010767 5.3e-07 59.3 163 27.6
Lalb_Chr22g0361071 Lupinus albus HOM05D002954 ORTHO05D003353 9.0e-07 58.5 134 31.3
Nitab4.5_0007595g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.2e-06 58.2 139 29.5
AL1G63190 Arabidopsis lyrata HOM05D008309 ORTHO05D010308 1.5e-06 57.8 205 25.9
Nitab4.5_0007501g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.5e-06 57.8 121 29.8
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 1.5e-06 57.8 130 31.5
arahy.Tifrunner.gnm1.ann1.T3L04J Arachis hypogaea HOM05D009662 ORTHO05D003353 2.0e-06 57.4 127 32.3
Psat0s797g0080 Pisum sativum HOM05D002954 ORTHO05D010767 2.0e-06 57.4 161 26.7
Psat3g162080 Pisum sativum HOM05D000107 ORTHO05D003213 2.0e-06 57.4 56 51.8
AT1G40087 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 2.6e-06 57.0 128 28.9
arahy.Tifrunner.gnm1.ann1.E8HHXW Arachis hypogaea HOM05D002954 ORTHO05D010308 2.6e-06 57.0 166 28.3
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.6e-06 57.0 120 30.0
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.6e-06 57.0 120 30.0
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.6e-06 57.0 120 30.0
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 2.6e-06 57.0 112 29.5
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.4e-06 56.6 120 30.0
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.4e-06 56.6 120 30.0
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.4e-06 56.6 120 30.0
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.4e-06 56.6 120 30.0
CAN.G251.4 Capsicum annuum HOM05D009128 ORTHO05D011389 3.4e-06 56.6 109 37.6
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.4e-06 56.6 179 26.8
arahy.Tifrunner.gnm1.ann1.FX9Q6E Arachis hypogaea HOM05D002954 ORTHO05D003353 4.5e-06 56.2 88 34.1
Rhsim01G0064900 Rhododendron simsii HOM05D019892 ORTHO05D023103 4.5e-06 56.2 156 29.5
TPR.G32610 Trifolium pratense HOM05D002954 ORTHO05D003353 4.5e-06 56.2 96 33.3
Nitab4.5_0002100g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.9e-06 55.8 64 45.3
Peaxi162Scf00417g00048 Petunia axillaris HOM05D002954 ORTHO05D003353 5.9e-06 55.8 85 38.8
arahy.Tifrunner.gnm1.ann1.FG1AAR Arachis hypogaea HOM05D009662 ORTHO05D003353 7.7e-06 55.5 89 33.7
Nn1g02510 Nelumbo nucifera HOM05D001309 ORTHO05D000385 7.7e-06 55.5 161 24.2
Nitab4.5_0003410g0070 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.7e-06 55.5 97 35.1
Nn4g24072 Nelumbo nucifera HOM05D001309 ORTHO05D000385 1.0e-05 55.1 115 30.4
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 1.0e-05 55.1 214 27.1


User provided reference genes

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