Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27589 Trifolium pratense HOM05D002270 ORTHO05D016129 1.5e-121 439.5 214 100.0
TPR.G9775 Trifolium pratense HOM05D002270 ORTHO05D002866 5.3e-119 431.0 214 97.7
Medtr8g018890 Medicago truncatula HOM05D002270 ORTHO05D002866 9.9e-110 400.2 214 90.7
Psat4g180280 Pisum sativum HOM05D002270 ORTHO05D002866 1.9e-100 369.4 214 84.1
Ca_23356_v3 Cicer arietinum L. HOM05D002270 ORTHO05D002866 2.0e-94 349.4 214 79.0
Lalb_Chr20g0113911 Lupinus albus HOM05D002270 ORTHO05D002866 6.5e-77 291.2 214 66.8
Glyma.07G035600 Glycine max HOM05D002270 ORTHO05D002866 8.5e-77 290.8 214 66.8
VMungo0464G0518 Vigna mungo HOM05D002270 ORTHO05D002866 1.0e-74 283.9 214 65.4
Lj3g0006373 Lotus japonicus HOM05D002270 ORTHO05D002866 3.9e-74 282.0 214 65.9
Phvul.010G134100 Phaseolus vulgaris HOM05D002270 ORTHO05D002866 1.1e-73 280.4 214 64.5
Glyma.16G004800 Glycine max HOM05D002270 ORTHO05D002866 5.7e-73 278.1 212 65.6
VMungo0331G1298 Vigna mungo HOM05D002270 ORTHO05D002866 5.7e-73 278.1 214 64.5
arahy.Tifrunner.gnm1.ann1.3D1K9T Arachis hypogaea HOM05D002270 ORTHO05D002866 2.7e-67 259.2 214 58.4
arahy.Tifrunner.gnm1.ann1.B3D1QM Arachis hypogaea HOM05D002270 ORTHO05D002866 3.6e-67 258.8 214 58.9
QL05p009063 Quercus lobata HOM05D002270 ORTHO05D002866 3.1e-55 219.2 215 51.6
Haze_16005 Corylus avellana HOM05D002270 ORTHO05D002866 4.5e-54 215.3 214 50.5
Cfa003549 Carpinus fangiana HOM05D002270 ORTHO05D002866 5.9e-54 214.9 214 50.0
Actinidia32171 Actinidia chinensis HOM05D002270 ORTHO05D002866 1.9e-52 209.9 212 51.4
CiPaw.01G221300 Carya illinoinensis HOM05D002270 ORTHO05D002866 2.7e-51 206.1 214 50.5
Dinv37885 Davidia involucrata HOM05D002270 ORTHO05D002866 6.1e-51 204.9 207 48.3
TAR636G1145 Trochodendron aralioides HOM05D002270 ORTHO05D002866 3.0e-50 202.6 206 49.5
CSS0023775 Camellia sinensis var. sinensis HOM05D002270 ORTHO05D002866 5.2e-50 201.8 211 48.8
Atru.chr1.3813 Acer truncatum HOM05D002270 ORTHO05D002866 8.8e-50 201.1 211 48.8
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 4.4e-49 198.7 211 48.3
TWI09G1355 Tripterygium wilfordii HOM05D002270 ORTHO05D002866 7.0e-47 191.4 207 46.4
Lj5C40G12 Lonicera japonica HOM05D002270 ORTHO05D002866 1.2e-46 190.7 207 44.9
Thecc.06G117100 Theobroma cacao HOM05D002270 ORTHO05D002866 5.6e-44 181.8 210 45.7
Manes.04G142500 Manihot esculenta HOM05D002270 ORTHO05D002866 1.6e-43 180.3 206 45.6
Glyma.19G039050 Glycine max HOM05D002270 ORTHO05D016129 8.0e-43 177.9 131 66.4
Gohir.D10G058500 Gossypium hirsutum HOM05D002270 ORTHO05D002866 1.4e-42 177.2 211 46.4
PGR142G3590 Punica granatum HOM05D002270 ORTHO05D002866 1.4e-42 177.2 203 43.3
RcHm_v2.0_Chr2g0144641 Rosa chinensis HOM05D002270 ORTHO05D002866 1.4e-42 177.2 214 44.9
vmacro22217 Vaccinium macrocarpon HOM05D002270 ORTHO05D002866 2.3e-42 176.4 200 46.0
Duzib235G1111 Durio zibethinus HOM05D002270 ORTHO05D002866 3.0e-42 176.0 210 44.8
COL.COLO4_30723 Corchorus olitorius HOM05D002270 ORTHO05D002866 8.9e-42 174.5 210 43.8
Potri.017G039100 Populus trichocarpa HOM05D002270 ORTHO05D002866 8.9e-42 174.5 206 45.1
MSTRG.10966 Avicennia marina HOM05D002270 ORTHO05D002866 5.7e-41 171.8 207 42.0
Gohir.A10G056600 Gossypium hirsutum HOM05D002270 ORTHO05D002866 5.7e-41 171.8 211 45.5
Nn8g38745 Nelumbo nucifera HOM05D002270 ORTHO05D002866 5.7e-41 171.8 197 44.2
Prupe.3G044200 Prunus persica HOM05D002270 ORTHO05D002866 2.2e-40 169.9 214 44.9
Sed0013702 Sechium edule HOM05D002270 ORTHO05D002866 2.2e-40 169.9 214 42.5
Sabra17G0026200 Salix brachista HOM05D002270 ORTHO05D002866 3.7e-40 169.1 182 47.3
COL.COLO4_12568 Corchorus olitorius HOM05D002270 ORTHO05D002866 4.9e-40 168.7 210 42.9
FAN02G3927 Fragaria x ananassa HOM05D002270 ORTHO05D002866 4.9e-40 168.7 214 42.1
Lsat_1_v5_gn_7_1960 Lactuca sativa HOM05D002270 ORTHO05D002866 2.4e-39 166.4 207 42.5
FAN05G0510 Fragaria x ananassa HOM05D002270 ORTHO05D002866 3.2e-39 166.0 214 42.1
Lsat_1_v5_gn_4_95020 Lactuca sativa HOM05D002270 ORTHO05D002866 3.2e-39 166.0 207 42.0
MELO3C024369.2 Cucumis melo HOM05D002270 ORTHO05D002866 5.4e-39 165.2 214 43.5
CsaV3_7G034610 Cucumis sativus L. HOM05D002270 ORTHO05D002866 7.0e-39 164.9 214 43.5
FAN14G4121 Fragaria x ananassa HOM05D002270 ORTHO05D002866 7.8e-38 161.4 214 42.1
Nitab4.5_0003025g0020 Nicotiana tabacum HOM05D002270 ORTHO05D002866 1.3e-37 160.6 209 41.1
SHI16816 Sapria himalayana HOM05D002270 ORTHO05D002866 1.3e-37 160.6 179 47.5
PSO144G0138 Papaver somniferum HOM05D002270 ORTHO05D002866 1.7e-37 160.2 211 41.2
ClCG09G000860 Citrullus lanatus HOM05D002270 ORTHO05D002866 2.3e-37 159.8 214 42.1
Nitab4.5_0000433g0200 Nicotiana tabacum HOM05D002270 ORTHO05D002866 2.3e-37 159.8 209 40.7
FvH4_6g34300 Fragaria vesca HOM05D002270 ORTHO05D002866 3.9e-37 159.1 214 41.6
Cc04_g01520 Coffea canephora HOM05D002270 ORTHO05D002866 8.6e-37 157.9 184 42.9
CAN.G1010.9 Capsicum annuum HOM05D002270 ORTHO05D002866 1.1e-36 157.5 209 39.7
Aqoxy7G03985 Aquilegia oxysepala HOM05D002270 ORTHO05D002866 1.5e-36 157.1 214 41.1
Rhsim07G0217300 Rhododendron simsii HOM05D002270 ORTHO05D002866 1.9e-36 156.8 200 40.5
Migut.H01763 Erythranthe guttata HOM05D002270 ORTHO05D002866 2.5e-36 156.4 206 39.3
MD05G1009600 Malus domestica HOM05D002270 ORTHO05D002866 7.3e-36 154.8 216 41.2
Hund05750 Selenicereus undatus HOM05D002270 ORTHO05D002866 9.5e-36 154.5 212 41.0
Rhsim08G0236800 Rhododendron simsii HOM05D002270 ORTHO05D002866 1.2e-35 154.1 187 44.4
PSO423G0075 Papaver somniferum HOM05D002270 ORTHO05D002866 2.1e-35 153.3 211 39.3
Oeu039944.3 Olea europaea HOM05D002270 ORTHO05D002866 2.8e-35 152.9 215 41.4
Sc15g0000370 Simmondsia chinensis HOM05D002270 ORTHO05D002866 2.8e-35 152.9 194 44.3
Gorai.011G062600 Gossypium raimondii HOM05D002270 ORTHO05D002866 4.7e-35 152.1 211 41.7
ECA232G3855 Erigeron canadensis HOM05D002270 ORTHO05D002866 8.0e-35 151.4 201 40.3
DCAR_014031 Daucus carota HOM05D002270 ORTHO05D002866 1.4e-34 150.6 200 43.5
SGA_v2.0_scaffold71G23844 Striga asiatica HOM05D002270 ORTHO05D002866 8.9e-34 147.9 207 37.7
Sopen04g028450 Solanum pennellii HOM05D002270 ORTHO05D002866 2.0e-33 146.7 239 38.1
Peaxi162Scf00226g00823 Petunia axillaris HOM05D002270 ORTHO05D002866 5.8e-33 145.2 234 37.2
Ciclev10024676m.g Citrus clementina HOM05D002270 ORTHO05D002866 7.5e-33 144.8 177 44.1
HanXRQChr09g0276661 Helianthus annuus HOM05D002270 ORTHO05D002866 9.8e-33 144.4 176 39.2
Solyc04g072260.3 Solanum lycopersicum HOM05D002270 ORTHO05D002866 4.9e-32 142.1 236 37.3
CANSAT56G0650 Cannabis sativa HOM05D002270 ORTHO05D002866 8.3e-32 141.4 179 42.5
SalBow6G4013 Salvia bowleyana HOM05D002270 ORTHO05D002866 8.3e-32 141.4 196 41.8
Eucgr.J02836 Eucalyptus grandis HOM05D002270 ORTHO05D002866 3.5e-30 136.0 149 47.7
AUR62001507 Chenopodium quinoa HOM05D002270 ORTHO05D002866 1.9e-28 130.2 196 37.2
THA.LOC104807245 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 2.8e-27 126.3 208 40.4
AUR62009863 Chenopodium quinoa HOM05D002270 ORTHO05D002866 3.6e-27 125.9 196 35.7
GSVIVG01016794001 Vitis vinifera HOM05D002270 ORTHO05D002866 4.7e-27 125.6 210 38.1
THA.LOC104805560 Tarenaya hassleriana HOM05D002270 ORTHO05D002866 1.4e-26 124.0 213 40.4
Oeu047969.1 Olea europaea HOM05D002270 ORTHO05D002866 2.6e-25 119.8 218 36.7
CARHR059570 Cardamine hirsuta HOM05D002270 ORTHO05D002866 1.3e-24 117.5 202 36.6
HPP92_008118 Vanilla planifolia HOM05D002270 ORTHO05D002866 8.3e-24 114.8 191 34.6
AL2G25500 Arabidopsis lyrata HOM05D002270 ORTHO05D002866 1.9e-23 113.6 202 36.6
Psat4g103760 Pisum sativum HOM05D001026 ORTHO05D020973 3.2e-23 112.8 59 84.7
unitig_22.g5235 Utricularia gibba HOM05D002270 ORTHO05D002866 4.1e-23 112.5 210 32.4
CDE12G0087 Ceratophyllum demersum HOM05D002270 ORTHO05D002866 5.4e-23 112.1 185 35.7
AT1G67120 Arabidopsis thaliana HOM05D002270 ORTHO05D002866 1.2e-22 110.9 202 37.1
BolC5t32598H Brassica oleracea HOM05D002270 ORTHO05D016129 4.6e-22 109.0 201 35.3
EL10Ac7g16387 Beta vulgaris HOM05D002270 ORTHO05D002866 7.8e-22 108.2 195 31.8
A02p14000 Brassica napus HOM05D002270 ORTHO05D002866 1.7e-21 107.1 201 34.3
BraA02t06460Z Brassica rapa HOM05D002270 ORTHO05D002866 1.7e-21 107.1 201 34.3
C02p22490 Brassica napus HOM05D002270 ORTHO05D002866 2.3e-21 106.7 201 34.3
Carub.0002s1342 Capsella rubella HOM05D002270 ORTHO05D002866 2.3e-21 106.7 192 37.0
BcaC05g27863 Brassica carinata HOM05D002270 ORTHO05D002866 3.0e-21 106.3 196 35.2
Carub.0002s1105 Capsella rubella HOM05D002270 ORTHO05D002866 1.1e-20 104.4 188 34.6
BolC2t08403H Brassica oleracea HOM05D002270 ORTHO05D002866 1.5e-20 104.0 201 33.3
Sp5g22050 Schrenkiella parvula HOM05D002270 ORTHO05D002866 2.5e-20 103.2 201 34.3
C05p38600 Brassica napus HOM05D002270 ORTHO05D016129 5.6e-20 102.1 191 34.0
ATR0736G011 Amborella trichopoda HOM05D002270 ORTHO05D002866 9.5e-20 101.3 190 34.7
Zm00001eb290580 Zea mays HOM05D002270 ORTHO05D002866 1.2e-19 100.9 172 32.6
Thhalv10017991m.g Eutrema salsugineum HOM05D002270 ORTHO05D002866 1.6e-19 100.5 201 33.3
MBI15_g37229_MAGBIO Magnolia biondii HOM05D002270 ORTHO05D016129 2.1e-19 100.1 72 58.3
VMungo0366G0001 Vigna mungo HOM05D002270 ORTHO05D002866 2.6e-17 93.2 100 54.0
Aa31LG2G3520 Aethionema arabicum HOM05D002270 ORTHO05D002866 1.6e-14 84.0 213 31.5
Ah.08g216540 Amaranthus hybridus HOM05D002270 ORTHO05D002866 2.1e-14 83.6 148 35.1
QL93p0356_0058 Quercus lobata HOM05D002270 ORTHO05D002866 3.0e-13 79.7 59 64.4
MBI18_g29805_MAGBIO Magnolia biondii HOM05D002270 ORTHO05D016129 3.5e-06 56.2 61 41.0


User provided reference genes

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