Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 2.8e-127 458.8 258 100.0
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 5.6e-83 311.6 264 67.0
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 7.1e-70 268.1 260 70.8
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 3.2e-46 189.5 264 55.7
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 1.9e-43 180.3 234 58.1
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 1.4e-41 174.1 268 55.6
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 1.2e-40 171.0 269 55.0
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 2.6e-40 169.9 279 51.3
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 1.2e-37 161.0 277 51.6
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 2.7e-37 159.8 283 49.1
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 3.6e-37 159.5 283 49.1
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 4.6e-37 159.1 277 49.8
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.5e-35 154.1 257 51.0
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 2.0e-35 153.7 269 51.7
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 1.3e-34 151.0 279 51.6
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 1.3e-34 151.0 286 48.6
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 6.3e-34 148.7 285 48.4
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 6.3e-34 148.7 271 48.0
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 8.2e-34 148.3 271 48.0
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 1.1e-33 147.9 271 47.2
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 1.4e-33 147.5 284 50.0
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 6.9e-33 145.2 153 52.3
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 6.9e-33 145.2 269 51.3
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 9.1e-33 144.8 280 47.5
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 2.6e-32 143.3 267 46.4
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 4.5e-32 142.5 284 48.9
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 5.9e-32 142.1 273 50.9
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 1.7e-31 140.6 276 48.9
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 1.7e-31 140.6 281 48.4
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 2.9e-31 139.8 279 49.8
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 6.5e-31 138.7 284 48.9
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 1.4e-30 137.5 278 48.6
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 1.9e-30 137.1 280 49.6
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 4.2e-30 136.0 284 47.5
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 2.1e-29 133.7 258 47.7
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 7.9e-29 131.7 265 48.3
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 1.0e-28 131.3 274 47.4
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 1.0e-28 131.3 296 44.3
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 1.0e-28 131.3 280 46.4
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 1.0e-28 131.3 268 47.4
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 2.3e-28 130.2 294 40.1
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 6.7e-28 128.6 284 43.7
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 6.7e-28 128.6 289 45.3
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 8.8e-28 128.3 286 45.5
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 1.5e-27 127.5 273 46.9
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.5e-27 127.5 283 44.9
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 1.5e-27 127.5 303 39.6
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 3.3e-27 126.3 270 47.4
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 9.7e-27 124.8 272 46.0
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 1.3e-26 124.4 274 46.7
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 1.7e-26 124.0 272 44.5
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 1.7e-26 124.0 266 47.0
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 2.2e-26 123.6 283 45.6
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 6.3e-26 122.1 277 44.4
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 6.3e-26 122.1 288 44.1
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 8.2e-26 121.7 278 46.0
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 8.2e-26 121.7 281 43.4
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 8.2e-26 121.7 276 44.2
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 1.1e-25 121.3 282 44.3
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 1.8e-25 120.6 274 47.1
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 3.1e-25 119.8 251 48.6
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 7.0e-25 118.6 277 46.2
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 1.6e-24 117.5 111 60.4
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 2.0e-24 117.1 262 37.0
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 2.6e-24 116.7 273 46.2
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 4.5e-24 115.9 316 38.0
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 5.9e-24 115.5 291 44.7
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 1.0e-23 114.8 285 45.3
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 1.0e-23 114.8 103 60.2
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 1.7e-23 114.0 103 60.2
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 2.9e-23 113.2 276 43.5
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 3.8e-23 112.8 101 60.4
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 5.0e-23 112.5 97 62.9
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 6.5e-23 112.1 97 61.9
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 8.5e-23 111.7 282 45.0
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 3.2e-22 109.8 99 57.6
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 3.2e-22 109.8 99 57.6
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 7.2e-22 108.6 278 44.2
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 9.4e-22 108.2 328 39.0
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 2.7e-21 106.7 149 45.6
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 3.6e-21 106.3 286 43.4
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 8.0e-21 105.1 294 42.9
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 1.0e-20 104.8 103 59.2
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 1.4e-20 104.4 271 41.3
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 2.3e-20 103.6 287 43.6
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 4.0e-20 102.8 149 45.0
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 2.0e-19 100.5 289 42.2
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 1.3e-18 97.8 266 44.7
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 1.3e-18 97.8 271 42.8
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 2.2e-18 97.1 278 40.6
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 3.7e-18 96.3 99 60.6
arahy.Tifrunner.gnm1.ann1.T7NAK5 Arachis hypogaea HOM05D015469 ORTHO05D009348 4.8e-18 95.9 83 56.6
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 5.9e-16 89.0 108 53.7
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 5.9e-16 89.0 107 43.9
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 1.3e-15 87.8 240 44.2
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 1.3e-15 87.8 258 36.4
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 5.0e-15 85.9 106 50.0
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 5.0e-15 85.9 106 50.0
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 8.5e-15 85.1 95 50.5
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 9.4e-14 81.6 301 36.9
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 9.4e-14 81.6 249 29.7
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 1.6e-13 80.9 160 54.4
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 2.7e-13 80.1 291 39.9
CBR_g18775 Chara braunii HOM05D000368 ORTHO05D009348 8.0e-13 78.6 191 39.3
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 8.0e-13 78.6 97 48.5
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 1.4e-12 77.8 153 35.3
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 2.0e-11 73.9 208 42.8
arahy.Tifrunner.gnm1.ann1.QCHX4X Arachis hypogaea HOM05D000368 ORTHO05D009348 1.3e-10 71.2 138 37.7
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 1.3e-10 71.2 186 37.1
Dinv28434 Davidia involucrata HOM05D000368 ORTHO05D000289 6.3e-10 68.9 124 48.4
arahy.Tifrunner.gnm1.ann1.4PMG8D Arachis hypogaea HOM05D000368 ORTHO05D009348 3.1e-09 66.6 66 54.5
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 1.5e-06 57.8 211 39.3


User provided reference genes

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