Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26918 Trifolium pratense HOM05D000927 ORTHO05D010650 4.5e-35 150.6 71 100.0
Medtr7g075310 Medicago truncatula HOM05D000927 ORTHO05D000850 3.6e-16 87.8 44 88.6
Medtr7g079140 Medicago truncatula HOM05D000927 ORTHO05D000850 1.5e-14 82.4 50 78.0
Lalb_Chr22g0360621 Lupinus albus HOM05D000927 ORTHO05D000850 2.2e-13 78.6 49 67.3
TPR.G1106 Trifolium pratense HOM05D000927 ORTHO05D000850 7.1e-12 73.6 42 73.8
Ca_13820_v3 Cicer arietinum L. HOM05D000927 ORTHO05D010650 9.2e-12 73.2 42 76.2
Lj1g0017410 Lotus japonicus HOM05D000927 ORTHO05D000850 3.5e-11 71.2 43 72.1
Lj1g0016562 Lotus japonicus HOM05D000927 ORTHO05D000850 1.3e-10 69.3 43 72.1
Ca_07031_v3 Cicer arietinum L. HOM05D000927 ORTHO05D010650 1.7e-10 68.9 47 63.8
arahy.Tifrunner.gnm1.ann1.8AAV0M Arachis hypogaea HOM05D000927 ORTHO05D000850 6.6e-10 67.0 43 67.4
arahy.Tifrunner.gnm1.ann1.TWLP42 Arachis hypogaea HOM05D000927 ORTHO05D000850 6.6e-10 67.0 43 67.4
Psat3g161720 Pisum sativum HOM05D000927 ORTHO05D000850 6.6e-10 67.0 42 69.0
Medtr7g009910 Medicago truncatula HOM05D000927 ORTHO05D010650 8.6e-10 66.6 53 64.2
Glyma.16G066600 Glycine max HOM05D000927 ORTHO05D000850 1.5e-09 65.9 44 63.6
Medtr7g032230 Medicago truncatula HOM05D000927 ORTHO05D000850 1.5e-09 65.9 42 69.0
Ca_06536_v3 Cicer arietinum L. HOM05D000927 ORTHO05D000850 2.5e-09 65.1 47 66.0
arahy.Tifrunner.gnm1.ann1.DR162L Arachis hypogaea HOM05D000927 ORTHO05D000850 5.6e-09 63.9 42 61.9
arahy.Tifrunner.gnm1.ann1.FPT6I2 Arachis hypogaea HOM05D000927 ORTHO05D000850 5.6e-09 63.9 42 61.9
arahy.Tifrunner.gnm1.ann1.J29UY3 Arachis hypogaea HOM05D000927 ORTHO05D010650 1.6e-08 62.4 43 58.1
arahy.Tifrunner.gnm1.ann1.QX94W3 Arachis hypogaea HOM05D000927 ORTHO05D000850 2.1e-08 62.0 43 58.1
RcHm_v2.0_Chr7g0221051 Rosa chinensis HOM05D000927 ORTHO05D000850 2.8e-08 61.6 45 57.8
FAN02G0565 Fragaria x ananassa HOM05D000927 ORTHO05D000850 6.2e-08 60.5 47 55.3
FvH4_6g36630 Fragaria vesca HOM05D000927 ORTHO05D000850 8.1e-08 60.1 47 55.3
FAN14G4444 Fragaria x ananassa HOM05D000927 ORTHO05D000850 8.1e-08 60.1 47 55.3
GSVIVG01029564001 Vitis vinifera HOM05D000927 ORTHO05D000850 8.1e-08 60.1 49 55.1
RcHm_v2.0_Chr2g0149101 Rosa chinensis HOM05D000927 ORTHO05D000850 1.1e-07 59.7 49 51.0
TWI18G0806 Tripterygium wilfordii HOM05D000927 ORTHO05D000850 1.1e-07 59.7 50 54.0
RcHm_v2.0_Chr7g0212221 Rosa chinensis HOM05D000927 ORTHO05D000850 1.4e-07 59.3 42 59.5
Peaxi162Scf00972g00019 Petunia axillaris HOM05D000927 ORTHO05D000850 2.4e-07 58.5 43 55.8
Peaxi162Scf00972g00037 Petunia axillaris HOM05D000927 ORTHO05D000850 2.4e-07 58.5 43 55.8
TWI18G0296 Tripterygium wilfordii HOM05D000927 ORTHO05D000850 2.4e-07 58.5 45 57.8
CANSAT01G1402 Cannabis sativa HOM05D000927 ORTHO05D000850 3.1e-07 58.2 45 55.6
FvH4_5g23280 Fragaria vesca HOM05D000927 ORTHO05D000850 3.1e-07 58.2 42 59.5
FvH4_6g36640 Fragaria vesca HOM05D000927 ORTHO05D000850 3.1e-07 58.2 45 55.6
CANSAT25G1484 Cannabis sativa HOM05D000927 ORTHO05D000850 4.0e-07 57.8 51 49.0
FAN04G2937 Fragaria x ananassa HOM05D000927 ORTHO05D000850 4.0e-07 57.8 42 59.5
FAN08G0772 Fragaria x ananassa HOM05D000927 ORTHO05D000850 4.0e-07 57.8 42 59.5
Prupe.7G024000 Prunus persica HOM05D000927 ORTHO05D000850 4.0e-07 57.8 45 53.3
Sopen08g019470 Solanum pennellii HOM05D000927 ORTHO05D000850 4.0e-07 57.8 42 57.1
AUR62009187 Chenopodium quinoa HOM05D000927 ORTHO05D000850 5.2e-07 57.4 42 52.4
AUR62022040 Chenopodium quinoa HOM05D000927 ORTHO05D000850 5.2e-07 57.4 42 52.4
QL02p001614 Quercus lobata HOM05D000927 ORTHO05D000850 5.2e-07 57.4 51 52.9
Lsat_1_v5_gn_6_7540 Lactuca sativa HOM05D000927 ORTHO05D000850 6.8e-07 57.0 42 57.1
Peaxi162Scf00436g00515 Petunia axillaris HOM05D000927 ORTHO05D000850 6.8e-07 57.0 44 52.3
Solyc08g065780.2 Solanum lycopersicum HOM05D000927 ORTHO05D000850 6.8e-07 57.0 42 57.1
ECA240G2467 Erigeron canadensis HOM05D000927 ORTHO05D000850 8.9e-07 56.6 43 53.5
FAN18G2277 Fragaria x ananassa HOM05D000927 ORTHO05D000850 8.9e-07 56.6 42 57.1
HanXRQChr03g0078801 Helianthus annuus HOM05D000927 ORTHO05D000850 8.9e-07 56.6 43 53.5
Nitab4.5_0010963g0030 Nicotiana tabacum HOM05D000927 ORTHO05D000850 8.9e-07 56.6 43 53.5
Peaxi162Scf00436g00613 Petunia axillaris HOM05D000927 ORTHO05D000850 8.9e-07 56.6 42 50.0
Phvul.001G033500 Phaseolus vulgaris HOM05D000927 ORTHO05D000850 8.9e-07 56.6 42 57.1
PGR031G0810 Punica granatum HOM05D000927 ORTHO05D000850 8.9e-07 56.6 42 52.4
Hund03360 Selenicereus undatus HOM05D000927 ORTHO05D000850 8.9e-07 56.6 41 56.1
Atru.chr1.2604 Acer truncatum HOM05D000927 ORTHO05D000850 1.2e-06 56.2 45 53.3
Nitab4.5_0000359g0110 Nicotiana tabacum HOM05D000927 ORTHO05D000850 1.2e-06 56.2 43 51.2
Nitab4.5_0000359g0130 Nicotiana tabacum HOM05D000927 ORTHO05D000850 1.2e-06 56.2 43 53.5
Peaxi162Scf00064g01633 Petunia axillaris HOM05D000927 ORTHO05D000850 1.2e-06 56.2 43 53.5
Peaxi162Scf00436g00311 Petunia axillaris HOM05D000927 ORTHO05D000850 1.2e-06 56.2 42 54.8
Solyc12g095910.2 Solanum lycopersicum HOM05D000927 ORTHO05D000850 1.2e-06 56.2 43 53.5
Sopen12g031810 Solanum pennellii HOM05D000927 ORTHO05D000850 1.2e-06 56.2 43 53.5
EL10Ac2g03930 Beta vulgaris HOM05D000927 ORTHO05D000850 1.5e-06 55.8 41 51.2
Nitab4.5_0006174g0010 Nicotiana tabacum HOM05D000927 ORTHO05D000850 1.5e-06 55.8 43 53.5
PGSC0003DMG400039318 Solanum tuberosum HOM05D000927 ORTHO05D000850 1.5e-06 55.8 42 54.8
VMungo0647G0984 Vigna mungo HOM05D000927 ORTHO05D000850 1.5e-06 55.8 42 54.8
Eucgr.C03009 Eucalyptus grandis HOM05D000927 ORTHO05D010650 2.0e-06 55.5 44 52.3
Eucgr.C03943 Eucalyptus grandis HOM05D000927 ORTHO05D000850 2.0e-06 55.5 44 52.3
FAN09G4517 Fragaria x ananassa HOM05D000927 ORTHO05D010650 2.0e-06 55.5 47 46.8
Glyma.14G092800 Glycine max HOM05D000927 ORTHO05D000850 2.0e-06 55.5 42 54.8
Glyma.17G230700 Glycine max HOM05D000927 ORTHO05D000850 2.0e-06 55.5 42 54.8
Gohir.D05G045550 Gossypium hirsutum HOM05D000927 ORTHO05D000850 2.0e-06 55.5 46 52.2
Peaxi162Scf00436g00612 Petunia axillaris HOM05D000927 ORTHO05D000850 2.0e-06 55.5 42 47.6
PGR031G3549 Punica granatum HOM05D000927 ORTHO05D000850 2.0e-06 55.5 44 50.0
PGR042G2395 Punica granatum HOM05D000927 ORTHO05D000850 2.0e-06 55.5 42 57.1
Solyc08g065790.3 Solanum lycopersicum HOM05D000927 ORTHO05D000850 2.0e-06 55.5 42 54.8
Sopen08g019480 Solanum pennellii HOM05D000927 ORTHO05D000850 2.0e-06 55.5 42 54.8
TPR.G16977 Trifolium pratense HOM05D000927 ORTHO05D000850 2.0e-06 55.5 42 54.8
Ah.10g034600 Amaranthus hybridus HOM05D000927 ORTHO05D000850 2.6e-06 55.1 43 51.2
CAN.G208.73 Capsicum annuum HOM05D000927 ORTHO05D000850 2.6e-06 55.1 43 51.2
HanXRQChr02g0047981 Helianthus annuus HOM05D000927 ORTHO05D000850 2.6e-06 55.1 42 52.4
Lj5g0025832 Lotus japonicus HOM05D000927 ORTHO05D000850 2.6e-06 55.1 42 54.8
Nitab4.5_0000738g0130 Nicotiana tabacum HOM05D000927 ORTHO05D000850 2.6e-06 55.1 43 51.2
Manes.06G178900 Manihot esculenta HOM05D000927 ORTHO05D000850 3.4e-06 54.7 45 53.3
Medtr1g016780 Medicago truncatula HOM05D000927 ORTHO05D000850 3.4e-06 54.7 42 54.8
Psat6g018800 Pisum sativum HOM05D000927 ORTHO05D000850 3.4e-06 54.7 42 54.8
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 3.4e-06 54.7 42 52.4
Solyc08g065610.3 Solanum lycopersicum HOM05D000927 ORTHO05D000850 3.4e-06 54.7 43 51.2
Sopen08g019280 Solanum pennellii HOM05D000927 ORTHO05D000850 3.4e-06 54.7 43 51.2
PGSC0003DMG400013828 Solanum tuberosum HOM05D000927 ORTHO05D000850 3.4e-06 54.7 43 51.2
PGSC0003DMG400013831 Solanum tuberosum HOM05D000927 ORTHO05D000850 3.4e-06 54.7 42 54.8
PGSC0003DMG400029390 Solanum tuberosum HOM05D000927 ORTHO05D000850 3.4e-06 54.7 43 51.2
Actinidia01205 Actinidia chinensis HOM05D000927 ORTHO05D000850 4.4e-06 54.3 51 47.1
ECA233G4096 Erigeron canadensis HOM05D000927 ORTHO05D000850 4.4e-06 54.3 42 52.4
Lsat_1_v5_gn_5_45600 Lactuca sativa HOM05D000927 ORTHO05D000850 4.4e-06 54.3 43 51.2
Lj8C556T4 Lonicera japonica HOM05D000927 ORTHO05D000850 4.4e-06 54.3 43 51.2
Peaxi162Scf00436g00516 Petunia axillaris HOM05D000927 ORTHO05D000850 4.4e-06 54.3 42 50.0
Hund19476 Selenicereus undatus HOM05D000927 ORTHO05D000850 4.4e-06 54.3 43 51.2
VMungo1309G3070 Vigna mungo HOM05D000927 ORTHO05D000850 4.4e-06 54.3 42 52.4
Ciclev10013934m.g Citrus clementina HOM05D000927 ORTHO05D000850 5.8e-06 53.9 45 53.3
Nitab4.5_0011306g0030 Nicotiana tabacum HOM05D000927 ORTHO05D000850 5.8e-06 53.9 43 51.2
Phvul.009G076100 Phaseolus vulgaris HOM05D000927 ORTHO05D000850 5.8e-06 53.9 42 52.4
Rhsim11G0047200 Rhododendron simsii HOM05D000927 ORTHO05D000850 5.8e-06 53.9 51 49.0
Sc09g0009660 Simmondsia chinensis HOM05D000927 ORTHO05D000850 5.8e-06 53.9 46 47.8
EL10Ac2g03942 Beta vulgaris HOM05D000927 ORTHO05D000850 7.6e-06 53.5 43 51.2
CAN.G956.3 Capsicum annuum HOM05D000927 ORTHO05D000850 7.6e-06 53.5 41 48.8
AUR62009201 Chenopodium quinoa HOM05D000927 ORTHO05D000850 7.6e-06 53.5 43 53.5
AUR62043049 Chenopodium quinoa HOM05D000927 ORTHO05D000850 7.6e-06 53.5 43 53.5
Glyma.04G049900 Glycine max HOM05D000927 ORTHO05D000850 7.6e-06 53.5 42 52.4
Glyma.06G050700 Glycine max HOM05D000927 ORTHO05D000850 7.6e-06 53.5 42 52.4
Gorai.009G046800 Gossypium raimondii HOM05D000927 ORTHO05D000850 7.6e-06 53.5 46 50.0
Lalb_Chr14g0367851 Lupinus albus HOM05D000927 ORTHO05D000850 7.6e-06 53.5 42 52.4
MD14G1092500 Malus domestica HOM05D000927 ORTHO05D000850 7.6e-06 53.5 42 52.4
Sc23g0005510 Simmondsia chinensis HOM05D000927 ORTHO05D000850 7.6e-06 53.5 43 51.2
Actinidia30301 Actinidia chinensis HOM05D000927 ORTHO05D000850 9.9e-06 53.1 51 47.1
EL10Ac2g03931 Beta vulgaris HOM05D000927 ORTHO05D000037 9.9e-06 53.1 48 45.8
CAN.G1001.43 Capsicum annuum HOM05D000927 ORTHO05D000850 9.9e-06 53.1 42 52.4
Cfa017931 Carpinus fangiana HOM05D000927 ORTHO05D000850 9.9e-06 53.1 44 50.0
AUR62043048 Chenopodium quinoa HOM05D000927 ORTHO05D000850 9.9e-06 53.1 43 51.2
Ciclev10013943m.g Citrus clementina HOM05D000927 ORTHO05D000850 9.9e-06 53.1 42 54.8
Eucgr.J03188 Eucalyptus grandis HOM05D000927 ORTHO05D000850 9.9e-06 53.1 42 52.4
HanXRQChr02g0047971 Helianthus annuus HOM05D000927 ORTHO05D000850 9.9e-06 53.1 42 50.0
Peaxi162Scf00436g00514 Petunia axillaris HOM05D000927 ORTHO05D000850 9.9e-06 53.1 42 47.6
QL06p047002 Quercus lobata HOM05D000927 ORTHO05D000850 9.9e-06 53.1 45 48.9
QL06p047020 Quercus lobata HOM05D000927 ORTHO05D000850 9.9e-06 53.1 45 48.9
unitig_32.g11021 Utricularia gibba HOM05D000927 ORTHO05D000850 9.9e-06 53.1 42 47.6
unitig_578.g16574 Utricularia gibba HOM05D000927 ORTHO05D000850 9.9e-06 53.1 42 50.0
vmacro18735 Vaccinium macrocarpon HOM05D000927 ORTHO05D000850 9.9e-06 53.1 42 50.0


User provided reference genes

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