Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 7.7e-198 694.5 648 100.0
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 1.3e-173 614.0 648 94.3
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 8.9e-170 601.3 456 94.3
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 1.5e-148 530.8 459 88.2
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 8.4e-144 515.0 469 83.6
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 6.2e-139 498.8 463 83.2
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 3.1e-138 496.5 438 86.5
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 2.1e-134 483.8 469 81.2
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 2.5e-132 476.9 465 81.3
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 8.1e-131 471.9 451 82.3
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 2.5e-116 423.7 460 75.0
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 2.0e-113 414.1 452 75.9
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 5.9e-113 412.5 460 75.0
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 1.0e-109 401.7 455 73.6
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 3.9e-109 399.8 454 74.9
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 1.1e-108 398.3 463 72.1
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 2.5e-108 397.1 454 73.1
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 3.3e-108 396.7 455 72.3
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 4.3e-108 396.4 463 72.4
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 1.7e-107 394.4 457 72.4
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 4.8e-107 392.9 439 75.2
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 8.2e-107 392.1 458 72.3
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 1.1e-106 391.7 456 72.6
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 3.1e-106 390.2 457 72.2
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 4.1e-106 389.8 448 73.7
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 6.9e-106 389.0 458 72.1
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 6.9e-106 389.0 458 72.1
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 7.7e-105 385.6 453 73.1
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 2.2e-104 384.0 455 71.2
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 2.5e-103 380.6 466 71.2
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 7.2e-103 379.0 439 74.9
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 2.7e-102 377.1 425 76.9
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 2.7e-102 377.1 459 69.3
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 7.9e-102 375.6 457 70.7
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 1.0e-101 375.2 408 78.4
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 1.8e-101 374.4 406 77.8
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 3.9e-101 373.2 432 76.4
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 4.4e-100 369.8 450 72.0
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 5.7e-100 369.4 466 69.5
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 7.4e-100 369.0 435 74.9
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 1.1e-98 365.2 434 72.6
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 1.8e-98 364.4 434 72.1
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 3.1e-98 363.6 457 68.5
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 3.1e-98 363.6 457 68.5
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 9.1e-98 362.1 442 72.2
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 2.0e-97 360.9 458 69.2
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 1.3e-96 358.2 454 69.6
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 2.9e-96 357.1 450 69.1
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 3.8e-96 356.7 466 69.7
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 3.8e-96 356.7 438 70.8
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 6.5e-96 355.9 466 69.5
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 6.5e-96 355.9 451 69.2
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 2.5e-95 354.0 410 64.9
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 3.2e-95 353.6 458 68.3
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 3.2e-95 353.6 458 68.3
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 2.7e-94 350.5 436 70.9
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 3.6e-94 350.1 466 66.7
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 4.7e-94 349.7 453 68.4
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 1.8e-93 347.8 440 70.0
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 2.3e-93 347.4 469 68.4
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 3.0e-93 347.1 438 70.3
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 3.9e-93 346.7 408 73.3
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 5.2e-93 346.3 459 64.9
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 5.2e-93 346.3 440 70.0
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 6.7e-93 345.9 455 69.0
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 6.7e-93 345.9 414 74.6
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 2.0e-92 344.4 416 74.3
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 2.0e-92 344.4 445 69.0
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 3.3e-92 343.6 444 70.0
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 4.4e-92 343.2 414 74.4
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 3.7e-91 340.1 406 72.9
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 3.7e-91 340.1 445 68.3
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 1.8e-90 337.8 405 75.3
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 2.4e-90 337.4 541 51.9
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 4.1e-90 336.7 449 68.2
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 1.6e-89 334.7 405 76.3
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 2.0e-89 334.3 447 68.0
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 6.5e-88 329.3 463 64.6
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 4.0e-85 320.1 412 51.2
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 1.2e-84 318.5 400 75.2
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 1.5e-84 318.2 401 72.8
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 1.8e-82 311.2 458 49.6
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 3.5e-81 307.0 410 70.0
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 1.0e-77 295.4 448 63.8
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 1.1e-71 275.4 463 60.3
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.5e-71 275.0 228 60.5
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 4.7e-70 270.0 391 62.7
Sc15g0001710 Simmondsia chinensis HOM05D007352 ORTHO05D009389 6.8e-61 239.6 238 56.3
Actinidia32110 Actinidia chinensis HOM05D007352 ORTHO05D009389 1.5e-60 238.4 194 63.4
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 2.3e-53 214.5 117 88.0
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 7.0e-50 203.0 129 74.4
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 2.3e-45 188.0 129 69.8
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 3.4e-44 184.1 408 58.8
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 2.2e-43 181.4 120 70.8
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 6.2e-38 163.3 128 62.5
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 6.8e-37 159.8 101 74.3
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 8.9e-37 159.5 269 77.0
Ah.16g103250 Amaranthus hybridus HOM05D007352 ORTHO05D009389 2.4e-34 151.4 225 45.3
Aqoxy5G00202 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 3.2e-34 151.0 136 53.7
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 4.3e-31 140.6 423 52.2
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 7.1e-26 123.2 74 78.4
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 9.3e-26 122.9 73 74.0
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 2.7e-25 121.3 76 68.4
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 8.7e-24 116.3 68 75.0
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 9.0e-21 106.3 404 52.2
Mapoly0001s0055 Marchantia polymorpha HOM05D004079 ORTHO05D005437 1.0e-08 66.2 151 26.5
SEGI_37723 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 1.1e-07 62.8 56 51.8
CDE05G0489 Ceratophyllum demersum HOM05D007202 ORTHO05D009125 2.8e-06 58.2 197 26.9


User provided reference genes

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