Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G26110 Trifolium pratense HOM05D000592 ORTHO05D001485 2.6e-101 372.1 189 100.0
TPR.G26084 Trifolium pratense HOM05D000592 ORTHO05D001485 2.5e-88 328.9 178 93.8
Medtr1g103160 Medicago truncatula HOM05D000592 ORTHO05D001485 3.5e-74 282.0 178 82.0
Ca_10861_v3 Cicer arietinum L. HOM05D000592 ORTHO05D001485 5.0e-73 278.1 178 79.8
Psat6g205880 Pisum sativum HOM05D000592 ORTHO05D001485 7.5e-61 237.7 178 71.9
Glyma.20G149200 Glycine max HOM05D000592 ORTHO05D001485 3.4e-53 212.2 192 59.9
Glyma.10G245400 Glycine max HOM05D000592 ORTHO05D001485 7.5e-53 211.1 183 62.8
Lj5g0004600 Lotus japonicus HOM05D000592 ORTHO05D001485 4.9e-52 208.4 186 60.8
Phvul.007G060600 Phaseolus vulgaris HOM05D000592 ORTHO05D001485 1.4e-51 206.8 192 59.9
VMungo0720G2930 Vigna mungo HOM05D000592 ORTHO05D001485 6.0e-50 201.4 193 58.0
arahy.Tifrunner.gnm1.ann1.C4CAJP Arachis hypogaea HOM05D000592 ORTHO05D001485 1.2e-42 177.2 187 55.1
arahy.Tifrunner.gnm1.ann1.AFV0LT Arachis hypogaea HOM05D000592 ORTHO05D001485 4.6e-42 175.3 187 54.0
arahy.Tifrunner.gnm1.ann1.C1DBA7 Arachis hypogaea HOM05D000592 ORTHO05D001485 6.4e-36 154.8 200 49.0
arahy.Tifrunner.gnm1.ann1.ZRQ19F Arachis hypogaea HOM05D000592 ORTHO05D001485 1.4e-35 153.7 200 48.5
Lalb_Chr06g0160711 Lupinus albus HOM05D000592 ORTHO05D001485 1.9e-35 153.3 195 50.3
Lalb_Chr21g0304761 Lupinus albus HOM05D000592 ORTHO05D001485 7.1e-35 151.4 187 50.3
CiPaw.02G122400 Carya illinoinensis HOM05D000592 ORTHO05D001485 4.6e-26 122.1 183 40.4
Glyma.01G232901 Glycine max HOM05D000592 ORTHO05D001485 1.0e-25 120.9 201 39.8
LjContig00408g0023554 Lotus japonicus HOM05D000592 ORTHO05D001485 1.0e-25 120.9 189 42.9
Glyma.01G236400 Glycine max HOM05D000592 ORTHO05D001485 1.3e-25 120.6 199 40.2
Glyma.11G006800 Glycine max HOM05D000592 ORTHO05D001485 1.9e-24 116.7 199 40.2
Cfa008459 Carpinus fangiana HOM05D000592 ORTHO05D001485 2.5e-24 116.3 187 40.6
Haze_11215 Corylus avellana HOM05D000592 ORTHO05D001485 5.6e-24 115.2 181 39.2
Psat4g209880 Pisum sativum HOM05D000592 ORTHO05D001485 1.6e-23 113.6 186 40.3
CiPaw.01G197200 Carya illinoinensis HOM05D000592 ORTHO05D001485 5.3e-22 108.6 183 38.3
Medtr5g006520 Medicago truncatula HOM05D000592 ORTHO05D001485 9.0e-22 107.8 160 42.5
QL06p001382 Quercus lobata HOM05D000592 ORTHO05D001485 2.0e-21 106.7 187 38.0
VMungo1215G1460 Vigna mungo HOM05D000592 ORTHO05D001485 2.6e-21 106.3 197 37.1
Phvul.002G043800 Phaseolus vulgaris HOM05D000592 ORTHO05D001485 3.4e-21 105.9 197 37.6
TPR.G37911 Trifolium pratense HOM05D000592 ORTHO05D001485 1.9e-19 100.1 189 36.5
Thecc.04G236700 Theobroma cacao HOM05D000592 ORTHO05D001485 5.1e-17 92.0 180 38.9
Duzib212G0402 Durio zibethinus HOM05D000592 ORTHO05D001485 8.7e-17 91.3 181 37.0
Prupe.1G019400 Prunus persica HOM05D000592 ORTHO05D001485 1.9e-16 90.1 214 36.4
Duzib151G0506 Durio zibethinus HOM05D000592 ORTHO05D001485 3.3e-16 89.4 180 33.3
TAR365G0678 Trochodendron aralioides HOM05D000592 ORTHO05D001485 4.3e-16 89.0 210 34.8
CSS0037517 Camellia sinensis var. sinensis HOM05D000592 ORTHO05D001485 7.4e-16 88.2 205 33.7
Ciclev10004130m.g Citrus clementina HOM05D000592 ORTHO05D001485 4.8e-15 85.5 190 35.3
TAR362G0063 Trochodendron aralioides HOM05D000592 ORTHO05D001485 4.8e-15 85.5 212 33.5
Gorai.006G241600 Gossypium raimondii HOM05D000592 ORTHO05D001485 1.1e-14 84.3 181 36.5
Dinv14033 Davidia involucrata HOM05D000592 ORTHO05D001485 1.4e-14 84.0 205 36.1
Gohir.D09G220660 Gossypium hirsutum HOM05D000592 ORTHO05D001485 1.8e-14 83.6 181 36.5
MD13G1197900 Malus domestica HOM05D000592 ORTHO05D001485 1.8e-14 83.6 198 34.8
Lalb_Chr16g0376421 Lupinus albus HOM05D000592 ORTHO05D001485 6.9e-14 81.6 181 36.5
Gohir.A09G218100 Gossypium hirsutum HOM05D000592 ORTHO05D001485 9.0e-14 81.3 180 35.6
CANSAT78G1002 Cannabis sativa HOM05D000592 ORTHO05D001485 1.5e-13 80.5 198 31.8
CSS0037955 Camellia sinensis var. sinensis HOM05D000592 ORTHO05D001485 2.6e-13 79.7 168 36.3
TAR633G1270 Trochodendron aralioides HOM05D000592 ORTHO05D001485 2.6e-13 79.7 214 35.5
Dinv22512 Davidia involucrata HOM05D000592 ORTHO05D001485 5.8e-13 78.6 185 33.0
Dinv34787 Davidia involucrata HOM05D000592 ORTHO05D001485 5.8e-13 78.6 185 33.0
RcHm_v2.0_Chr4g0387381 Rosa chinensis HOM05D000592 ORTHO05D001485 7.6e-13 78.2 193 31.1
Sed0008526 Sechium edule HOM05D000592 ORTHO05D001485 7.6e-13 78.2 134 39.6
Atru.chr4.2386 Acer truncatum HOM05D000592 ORTHO05D001485 1.3e-12 77.4 193 34.7
Cpa.g.sc58.60 Carica papaya HOM05D000592 ORTHO05D001485 2.2e-12 76.6 212 33.5
CsaV3_3G013000 Cucumis sativus L. HOM05D000592 ORTHO05D001485 2.9e-12 76.3 115 40.9
FAN22G2244 Fragaria x ananassa HOM05D000592 ORTHO05D001485 2.9e-12 76.3 209 30.6
Potri.008G156200 Populus trichocarpa HOM05D000592 ORTHO05D001485 2.9e-12 76.3 197 31.5
Ca_24407_v3 Cicer arietinum L. HOM05D000592 ORTHO05D001485 3.8e-12 75.9 147 36.1
Atru.chr4.2409 Acer truncatum HOM05D000592 ORTHO05D001485 6.5e-12 75.1 172 36.6
CSS0026924 Camellia sinensis var. sinensis HOM05D000592 ORTHO05D001485 8.4e-12 74.7 168 35.1
FvH4_4g00822 Fragaria vesca HOM05D000592 ORTHO05D001485 8.4e-12 74.7 203 31.0
COL.COLO4_21542 Corchorus olitorius HOM05D000592 ORTHO05D001485 1.4e-11 73.9 179 34.1
Hma1.2p1_2084F.1_g313640 Hydrangea macrophylla HOM05D000592 ORTHO05D001485 1.9e-11 73.6 177 31.6
CSS0032582 Camellia sinensis var. sinensis HOM05D000592 ORTHO05D001485 2.5e-11 73.2 167 34.1
Dinv32897 Davidia involucrata HOM05D000592 ORTHO05D001485 2.5e-11 73.2 174 33.3
TWI09G1283 Tripterygium wilfordii HOM05D000592 ORTHO05D001485 4.2e-11 72.4 203 31.5
CSS0042524 Camellia sinensis var. sinensis HOM05D000592 ORTHO05D001485 7.1e-11 71.6 168 31.5
Sed0008729 Sechium edule HOM05D000592 ORTHO05D001485 7.1e-11 71.6 142 35.9
CSS0044359 Camellia sinensis var. sinensis HOM05D000592 ORTHO05D001485 1.6e-10 70.5 168 32.7
ClCG05G004940 Citrullus lanatus HOM05D000592 ORTHO05D001485 2.1e-10 70.1 116 38.8
MELO3C006509.2 Cucumis melo HOM05D000592 ORTHO05D001485 3.5e-10 69.3 114 39.5
Nn6g34135 Nelumbo nucifera HOM05D000592 ORTHO05D001485 4.6e-10 68.9 191 32.5
MD16G1197900 Malus domestica HOM05D000592 ORTHO05D001485 7.9e-10 68.2 198 31.8
Peaxi162Scf00520g00613 Petunia axillaris HOM05D000592 ORTHO05D001485 1.3e-09 67.4 206 32.5
Aa31LG8G9280 Aethionema arabicum HOM05D000592 ORTHO05D001485 3.9e-09 65.9 132 33.3
Manes.03G174800 Manihot esculenta HOM05D000592 ORTHO05D001485 3.9e-09 65.9 181 30.4
AT3G22790 Arabidopsis thaliana HOM05D000592 ORTHO05D001485 1.9e-08 63.5 114 38.6
Aqoxy2G03441 Aquilegia oxysepala HOM05D000592 ORTHO05D001485 2.5e-08 63.2 188 28.2
Nitab4.5_0003249g0050 Nicotiana tabacum HOM05D000592 ORTHO05D001485 2.5e-08 63.2 208 31.7
Manes.15G031600 Manihot esculenta HOM05D000592 ORTHO05D001485 3.3e-08 62.8 117 37.6
Sopen09g031370 Solanum pennellii HOM05D000592 ORTHO05D001485 3.3e-08 62.8 194 33.5
TWI53G0917 Tripterygium wilfordii HOM05D000592 ORTHO05D001485 3.3e-08 62.8 176 31.8
Sp3g20490 Schrenkiella parvula HOM05D000592 ORTHO05D001485 4.3e-08 62.4 129 34.1
AL3G37110 Arabidopsis lyrata HOM05D000592 ORTHO05D001485 5.7e-08 62.0 131 35.1
PGSC0003DMG400007687 Solanum tuberosum HOM05D000592 ORTHO05D001485 9.7e-08 61.2 203 32.0
Nitab4.5_0000085g0270 Nicotiana tabacum HOM05D000592 ORTHO05D001485 1.3e-07 60.8 210 31.4
Peaxi162Scf00245g01313 Petunia axillaris HOM05D000592 ORTHO05D001485 1.3e-07 60.8 181 31.5
Solyc09g082510.3 Solanum lycopersicum HOM05D000592 ORTHO05D001485 1.3e-07 60.8 194 33.0
CAN.G433.16 Capsicum annuum HOM05D000592 ORTHO05D001485 2.2e-07 60.1 198 28.3
C05p40320 Brassica napus HOM05D000592 ORTHO05D001485 3.7e-07 59.3 171 28.1
Cc03_g04140 Coffea canephora HOM05D000592 ORTHO05D001485 4.8e-07 58.9 175 29.7
A05p25950 Brassica napus HOM05D000592 ORTHO05D001485 6.3e-07 58.5 154 29.2
Lj1A50G82 Lonicera japonica HOM05D000592 ORTHO05D001485 6.3e-07 58.5 179 27.9
EL10Ac3g06467 Beta vulgaris HOM05D000592 ORTHO05D001485 1.4e-06 57.4 141 31.9
Nn1g02404 Nelumbo nucifera HOM05D000592 ORTHO05D001485 1.8e-06 57.0 184 31.5
Actinidia40125 Actinidia chinensis HOM05D000592 ORTHO05D001485 2.4e-06 56.6 206 26.2
BolC5t32773H Brassica oleracea HOM05D000592 ORTHO05D001485 2.4e-06 56.6 153 29.4
Carub.0003s2291 Capsella rubella HOM05D000592 ORTHO05D001485 2.4e-06 56.6 137 34.3
Duzib138G1205 Durio zibethinus HOM05D000592 ORTHO05D001485 2.4e-06 56.6 213 28.2
Potri.010G083300 Populus trichocarpa HOM05D000592 ORTHO05D001485 2.4e-06 56.6 184 28.3
TWI18G0970 Tripterygium wilfordii HOM05D000592 ORTHO05D001485 2.4e-06 56.6 184 29.9
PGSC0003DMG400028772 Solanum tuberosum HOM05D000592 ORTHO05D001485 3.1e-06 56.2 185 33.0
BraA05t21480Z Brassica rapa HOM05D000592 ORTHO05D001485 4.1e-06 55.8 136 30.9
Sopen09g027300 Solanum pennellii HOM05D000592 ORTHO05D001485 4.1e-06 55.8 119 32.8
Migut.G00371 Erythranthe guttata HOM05D000592 ORTHO05D001485 5.3e-06 55.5 196 29.6
C01p41560 Brassica napus HOM05D000592 ORTHO05D001485 6.9e-06 55.1 111 35.1
BolC1t04110H Brassica oleracea HOM05D000592 ORTHO05D001485 6.9e-06 55.1 111 35.1
BraA01t03373Z Brassica rapa HOM05D000592 ORTHO05D001485 6.9e-06 55.1 143 30.1
Thhalv10019883m.g Eutrema salsugineum HOM05D000592 ORTHO05D001485 9.0e-06 54.7 114 34.2


User provided reference genes

Program Settings