Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G25898 Trifolium pratense HOM05D007062 ORTHO05D008941 1.8e-103 379.8 270 100.0
Lj2g0026876 Lotus japonicus HOM05D007062 ORTHO05D008941 2.0e-83 313.2 271 88.2
Medtr5g012110 Medicago truncatula HOM05D007062 ORTHO05D008941 4.5e-83 312.0 270 88.1
Glyma.11G030700 Glycine max HOM05D007062 ORTHO05D008941 1.2e-80 303.9 271 87.8
Phvul.002G061100 Phaseolus vulgaris HOM05D007062 ORTHO05D008941 2.0e-75 286.6 285 79.6
VMungo1215G0274 Vigna mungo HOM05D007062 ORTHO05D008941 2.2e-74 283.1 285 80.0
arahy.Tifrunner.gnm1.ann1.06MV4V Arachis hypogaea HOM05D007062 ORTHO05D008941 1.0e-71 274.2 272 80.9
arahy.Tifrunner.gnm1.ann1.FU46H2 Arachis hypogaea HOM05D007062 ORTHO05D008941 1.0e-71 274.2 272 80.9
TAR375G0275 Trochodendron aralioides HOM05D007062 ORTHO05D008941 2.8e-69 266.2 270 79.6
Sopen08g027570 Solanum pennellii HOM05D007062 ORTHO05D008941 3.7e-69 265.8 269 79.9
PGSC0003DMG400004788 Solanum tuberosum HOM05D007062 ORTHO05D008941 1.4e-68 263.8 269 77.7
CAN.G1217.21 Capsicum annuum HOM05D007062 ORTHO05D008941 2.4e-68 263.1 269 78.1
Nitab4.5_0000993g0090 Nicotiana tabacum HOM05D007062 ORTHO05D008941 2.4e-68 263.1 271 79.7
Solyc08g079110.4 Solanum lycopersicum HOM05D007062 ORTHO05D008941 2.4e-68 263.1 269 79.9
Peaxi162Scf00002g00075 Petunia axillaris HOM05D007062 ORTHO05D008941 4.5e-67 258.8 269 75.8
CiPaw.12G106400 Carya illinoinensis HOM05D007062 ORTHO05D008941 1.7e-66 256.9 282 76.2
Lalb_Chr16g0379721 Lupinus albus HOM05D007062 ORTHO05D008941 1.7e-66 256.9 219 90.9
CSS0040813 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 2.2e-66 256.5 278 77.7
Nitab4.5_0005649g0010 Nicotiana tabacum HOM05D007062 ORTHO05D008941 2.2e-66 256.5 271 78.6
Lsat_1_v5_gn_6_2361 Lactuca sativa HOM05D007062 ORTHO05D008941 2.5e-65 253.1 276 77.9
GSVIVG01001267001 Vitis vinifera HOM05D007062 ORTHO05D008941 4.2e-65 252.3 273 78.0
CSS0025302 Camellia sinensis var. sinensis HOM05D007062 ORTHO05D008941 5.5e-65 251.9 284 75.7
Atru.chr9.1388 Acer truncatum HOM05D007062 ORTHO05D008941 3.6e-64 249.2 272 77.2
Migut.A00806 Erythranthe guttata HOM05D007062 ORTHO05D008941 8.0e-64 248.1 271 74.9
PSO063G0503 Papaver somniferum HOM05D007062 ORTHO05D008941 8.0e-64 248.1 277 77.6
SalBow6G7097 Salvia bowleyana HOM05D007062 ORTHO05D008941 1.0e-63 247.7 271 77.5
Sed0027513 Sechium edule HOM05D007062 ORTHO05D008941 1.8e-63 246.9 269 75.8
Cpa.g.sc29.119 Carica papaya HOM05D007062 ORTHO05D008941 5.2e-63 245.4 275 74.9
Prupe.5G075900 Prunus persica HOM05D007062 ORTHO05D008941 8.8e-63 244.6 281 71.5
PSO782G2909 Papaver somniferum HOM05D007062 ORTHO05D008941 1.5e-62 243.8 286 72.7
Manes.01G076100 Manihot esculenta HOM05D007062 ORTHO05D008941 2.6e-62 243.0 282 69.1
Duzib205G0297 Durio zibethinus HOM05D007062 ORTHO05D008941 9.7e-62 241.1 285 74.4
Sp1g10870 Schrenkiella parvula HOM05D007062 ORTHO05D008941 1.3e-61 240.7 283 74.2
RcHm_v2.0_Chr7g0202221 Rosa chinensis HOM05D007062 ORTHO05D008941 1.7e-61 240.4 284 75.4
BcaC07g42568 Brassica carinata HOM05D007062 ORTHO05D008941 2.8e-61 239.6 282 73.4
MSTRG.25539 Avicennia marina HOM05D007062 ORTHO05D008941 3.7e-61 239.2 268 65.7
Ciclev10021545m.g Citrus clementina HOM05D007062 ORTHO05D008941 4.8e-61 238.8 285 73.3
Actinidia02105 Actinidia chinensis HOM05D007062 ORTHO05D008941 6.3e-61 238.4 270 77.4
Gohir.D08G190800 Gossypium hirsutum HOM05D007062 ORTHO05D008941 1.1e-60 237.7 284 69.0
Thhalv10008422m.g Eutrema salsugineum HOM05D007062 ORTHO05D008941 1.4e-60 237.3 285 73.3
Aqoxy5G03933 Aquilegia oxysepala HOM05D007062 ORTHO05D008941 1.8e-60 236.9 283 74.9
QL12p014002 Quercus lobata HOM05D007062 ORTHO05D008941 3.1e-60 236.1 314 48.7
BolC8t52291H Brassica oleracea HOM05D007062 ORTHO05D008941 4.1e-60 235.7 282 72.7
ECA232G1654 Erigeron canadensis HOM05D007062 ORTHO05D008941 4.1e-60 235.7 276 72.1
FvH4_5g00330 Fragaria vesca HOM05D007062 ORTHO05D008941 5.3e-60 235.3 283 74.9
Carub.0001s1193 Capsella rubella HOM05D007062 ORTHO05D008941 9.1e-60 234.6 281 73.7
PGR031G1282 Punica granatum HOM05D007062 ORTHO05D008941 1.2e-59 234.2 268 64.6
Hund11577 Selenicereus undatus HOM05D007062 ORTHO05D008941 1.2e-59 234.2 273 71.1
BraA09t41747Z Brassica rapa HOM05D007062 ORTHO05D008941 1.6e-59 233.8 282 72.3
BcaC07g41714 Brassica carinata HOM05D007062 ORTHO05D008941 2.0e-59 233.4 282 72.7
Cc08_g12960 Coffea canephora HOM05D007062 ORTHO05D008941 2.0e-59 233.4 270 74.4
HPP92_003260 Vanilla planifolia HOM05D007062 ORTHO05D008941 2.0e-59 233.4 225 85.8
A09p63980 Brassica napus HOM05D007062 ORTHO05D008941 2.6e-59 233.0 282 72.7
C08p47500 Brassica napus HOM05D007062 ORTHO05D008941 2.6e-59 233.0 282 73.4
TWI60G0310 Tripterygium wilfordii HOM05D007062 ORTHO05D008941 2.6e-59 233.0 265 75.1
Potri.003G112900 Populus trichocarpa HOM05D007062 ORTHO05D008941 3.5e-59 232.6 276 68.5
Zm00001eb248670 Zea mays HOM05D007062 ORTHO05D008941 3.5e-59 232.6 228 81.6
Gorai.004G200900 Gossypium raimondii HOM05D007062 ORTHO05D008941 5.9e-59 231.9 284 64.1
Sc06g0007370 Simmondsia chinensis HOM05D007062 ORTHO05D008941 5.9e-59 231.9 257 76.3
FAN08G1089 Fragaria x ananassa HOM05D007062 ORTHO05D008941 1.7e-58 230.3 296 71.6
FAN18G0001 Fragaria x ananassa HOM05D007062 ORTHO05D008941 1.7e-58 230.3 296 71.6
Aa31LG1G2430 Aethionema arabicum HOM05D007062 ORTHO05D008941 2.2e-58 229.9 291 61.2
AT1G12250 Arabidopsis thaliana HOM05D007062 ORTHO05D008941 2.2e-58 229.9 283 72.1
CANSAT21G0465 Cannabis sativa HOM05D007062 ORTHO05D008941 2.2e-58 229.9 268 76.5
MELO3C005562.2 Cucumis melo HOM05D007062 ORTHO05D008941 2.9e-58 229.6 279 69.9
HanXRQChr02g0049591 Helianthus annuus HOM05D007062 ORTHO05D008941 2.9e-58 229.6 312 69.2
CsaV3_5G003940 Cucumis sativus L. HOM05D007062 ORTHO05D008941 3.8e-58 229.2 277 69.7
THA.LOC104818475 Tarenaya hassleriana HOM05D007062 ORTHO05D008941 3.8e-58 229.2 288 67.7
Thecc.03G257500 Theobroma cacao HOM05D007062 ORTHO05D008941 3.8e-58 229.2 290 66.9
AL1G23540 Arabidopsis lyrata HOM05D007062 ORTHO05D008941 5.0e-58 228.8 283 70.7
Eucgr.D02028 Eucalyptus grandis HOM05D007062 ORTHO05D008941 6.5e-58 228.4 260 60.0
SGA_v2.0_scaffold120G32845 Striga asiatica HOM05D007062 ORTHO05D008941 6.5e-58 228.4 272 73.9
ClCG01G003790 Citrullus lanatus HOM05D007062 ORTHO05D008941 1.5e-57 227.3 280 71.4
EL10Ac5g13006 Beta vulgaris HOM05D007062 ORTHO05D008941 9.4e-57 224.6 274 60.2
MD06G1065500 Malus domestica HOM05D007062 ORTHO05D008941 2.1e-56 223.4 283 72.4
Ah.02g116970 Amaranthus hybridus HOM05D007062 ORTHO05D008941 2.7e-56 223.0 273 72.2
vmacro05405 Vaccinium macrocarpon HOM05D007062 ORTHO05D008941 6.1e-56 221.9 196 87.2
Os02g0643500 Oryza sativa ssp. japonica HOM05D007062 ORTHO05D008941 8.0e-56 221.5 215 74.4
SEGI_22381 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 2.0e-54 216.9 237 79.3
FAN04G1528 Fragaria x ananassa HOM05D007062 ORTHO05D008941 1.3e-53 214.2 257 55.3
ATR0568G204 Amborella trichopoda HOM05D007062 ORTHO05D008941 6.3e-53 211.8 196 87.8
Sabra03G0078200 Salix brachista HOM05D007062 ORTHO05D008941 7.0e-52 208.4 364 42.9
Gohir.A08G172400 Gossypium hirsutum HOM05D007062 ORTHO05D008941 2.2e-50 203.4 193 77.2
AUR62007471 Chenopodium quinoa HOM05D007062 ORTHO05D008941 4.7e-48 195.7 183 83.6
SMO137G0193 Selaginella moellendorffii HOM05D007062 ORTHO05D008941 1.8e-47 193.7 216 65.7
CBR_g19734 Chara braunii HOM05D007062 ORTHO05D008941 2.3e-47 193.4 208 67.8
Glyma.01G211100 Glycine max HOM05D007062 ORTHO05D008941 2.3e-47 193.4 237 54.0
Mapoly0083s0077 Marchantia polymorpha HOM05D007062 ORTHO05D008941 6.8e-47 191.8 265 57.4
Pp3c21_17930 Physcomitrium patens HOM05D007062 ORTHO05D008941 2.8e-45 186.4 263 66.5
Psat2g178680 Pisum sativum HOM05D007062 ORTHO05D008941 2.5e-41 173.3 205 84.4
FAN13G1422 Fragaria x ananassa HOM05D007062 ORTHO05D008941 3.0e-39 166.4 220 52.3
Hma1.2p1_1691F.1_g297800 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 1.2e-38 164.5 85 91.8
Hma1.2p1_1691F.1_g297810 Hydrangea macrophylla HOM05D007062 ORTHO05D008941 1.2e-38 164.5 85 91.8
CDE04G1356 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 2.0e-38 163.7 85 90.6
COL.COLO4_37223 Corchorus olitorius HOM05D007062 ORTHO05D008941 5.7e-38 162.2 87 87.4
DCAR_004919 Daucus carota HOM05D007062 ORTHO05D008941 1.7e-37 160.6 87 88.5
AUR62039929 Chenopodium quinoa HOM05D007062 ORTHO05D008941 1.4e-36 157.5 87 86.2
AUR62043761 Chenopodium quinoa HOM05D007062 ORTHO05D008941 1.4e-36 157.5 87 86.2
CARHR012560 Cardamine hirsuta HOM05D007062 ORTHO05D008941 1.8e-36 157.1 85 88.2
Cfa012777 Carpinus fangiana HOM05D007062 ORTHO05D008941 8.0e-32 141.7 212 75.5
Dinv39100 Davidia involucrata HOM05D007062 ORTHO05D008941 3.1e-31 139.8 188 54.8
Nn6g34047 Nelumbo nucifera HOM05D007062 ORTHO05D008941 2.5e-25 120.2 119 58.8
AagrBONN_evm.TU.Sc2ySwM_228.1920 Anthoceros agrestis HOM05D000741 ORTHO05D000506 7.3e-25 118.6 216 58.3
GSVIVG01001268001 Vitis vinifera HOM05D007062 ORTHO05D008941 1.2e-22 111.3 124 54.8
Haze_08582 Corylus avellana HOM05D007062 ORTHO05D008941 2.9e-21 106.7 143 58.0
CDE04G0607 Ceratophyllum demersum HOM05D007062 ORTHO05D008941 1.2e-19 101.3 68 72.1
CAN.G1293.1 Capsicum annuum HOM05D007062 ORTHO05D008941 1.4e-15 87.8 112 48.2
Cre17.g721700 Chlamydomonas reinhardtii HOM05D007062 ORTHO05D008941 5.8e-14 82.4 188 47.9
COL.COLO4_37221 Corchorus olitorius HOM05D007062 ORTHO05D008941 3.7e-13 79.7 61 63.9
Lj8A257G61 Lonicera japonica HOM05D007062 ORTHO05D008941 4.9e-13 79.3 45 84.4
Rhsim10G0100700 Rhododendron simsii HOM05D000726 ORTHO05D007554 2.3e-10 70.5 87 52.9
MCO12G419 Micromonas commoda HOM05D007062 ORTHO05D008941 5.1e-10 69.3 66 57.6
SEGI_25676 Sequoiadendron giganteum HOM05D007062 ORTHO05D008941 1.4e-07 61.2 40 75.0
MCO04G309 Micromonas commoda HOM05D007062 ORTHO05D008941 4.4e-06 56.2 51 54.9


User provided reference genes

Program Settings