Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 4.6e-68 261.2 137 100.0
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 3.1e-64 248.4 137 94.9
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 1.6e-60 236.1 137 89.1
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 1.6e-60 236.1 137 89.1
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 1.6e-57 226.1 137 85.4
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 4.8e-57 224.6 137 87.6
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 6.2e-57 224.2 137 85.4
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 3.1e-56 221.9 137 83.2
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 4.5e-55 218.0 137 82.5
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 1.8e-51 206.1 137 81.8
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 3.9e-51 204.9 137 78.8
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 8.7e-51 203.8 137 79.6
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 2.5e-50 202.2 146 76.0
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 2.5e-50 202.2 137 77.4
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 5.7e-50 201.1 137 78.8
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 1.6e-49 199.5 137 78.8
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 2.2e-49 199.1 137 78.8
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 2.8e-49 198.7 137 79.6
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 8.2e-49 197.2 138 77.5
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 1.4e-48 196.4 138 78.3
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 1.8e-48 196.1 137 77.4
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 2.4e-48 195.7 137 77.4
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.4e-48 195.7 137 77.4
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 2.4e-48 195.7 137 77.4
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 5.3e-48 194.5 138 79.7
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 5.3e-48 194.5 138 79.0
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 6.9e-48 194.1 137 77.4
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 9.0e-48 193.7 138 80.4
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 1.2e-47 193.4 138 76.8
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 2.0e-47 192.6 138 78.3
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 2.6e-47 192.2 139 77.7
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 2.6e-47 192.2 138 77.5
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 2.6e-47 192.2 138 77.5
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 2.6e-47 192.2 138 77.5
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 5.9e-47 191.0 115 84.3
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 1.0e-46 190.3 138 79.0
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 1.7e-46 189.5 137 75.2
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 2.9e-46 188.7 137 75.2
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 2.9e-46 188.7 138 77.5
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 6.5e-46 187.6 136 75.7
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 8.5e-46 187.2 138 76.1
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 1.1e-45 186.8 143 76.9
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.9e-45 186.0 137 73.7
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 2.5e-45 185.7 141 76.6
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 4.2e-45 184.9 140 77.1
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 4.2e-45 184.9 138 75.4
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 7.2e-45 184.1 138 74.6
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 7.2e-45 184.1 138 74.6
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 3.6e-44 181.8 138 73.9
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 1.0e-43 180.3 138 73.2
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 1.4e-43 179.9 137 75.9
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 1.4e-43 179.9 137 75.9
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 1.8e-43 179.5 138 73.2
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 2.3e-43 179.1 138 73.2
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 3.0e-43 178.7 138 73.2
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 3.0e-43 178.7 138 73.2
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 3.0e-43 178.7 138 73.2
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 3.0e-43 178.7 138 76.1
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 3.9e-43 178.3 138 72.5
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 3.9e-43 178.3 138 73.2
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 3.9e-43 178.3 138 73.2
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 5.1e-43 177.9 138 74.6
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 5.1e-43 177.9 138 71.7
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 5.1e-43 177.9 137 74.5
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 6.7e-43 177.6 138 72.5
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 6.7e-43 177.6 138 71.0
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 6.7e-43 177.6 139 72.7
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 8.8e-43 177.2 137 72.3
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 8.8e-43 177.2 139 72.7
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 1.1e-42 176.8 130 76.2
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 2.0e-42 176.0 139 69.1
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 4.3e-42 174.9 138 71.7
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 5.7e-42 174.5 138 71.0
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 5.7e-42 174.5 138 71.0
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 1.3e-41 173.3 139 72.7
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 1.3e-41 173.3 138 71.0
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 1.3e-41 173.3 140 72.9
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 1.7e-41 172.9 139 74.1
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 1.7e-41 172.9 139 72.7
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 1.7e-41 172.9 138 70.3
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 1.7e-41 172.9 102 85.3
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 3.7e-41 171.8 139 71.2
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 8.2e-41 170.6 139 71.9
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 1.4e-40 169.9 138 69.6
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 3.1e-40 168.7 138 71.7
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 3.1e-40 168.7 138 73.9
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 1.5e-39 166.4 137 71.5
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 4.5e-39 164.9 138 66.7
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 5.9e-39 164.5 136 65.4
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 2.9e-38 162.2 139 69.1
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 9.4e-37 157.1 131 71.0
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 9.4e-37 157.1 138 68.1
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 4.7e-36 154.8 138 67.4
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 1.8e-35 152.9 132 68.9
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 5.1e-35 151.4 136 61.0
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 2.0e-34 149.4 138 64.5
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 7.4e-34 147.5 142 59.9
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 6.3e-33 144.4 116 75.0
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 4.1e-32 141.7 103 76.7
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 3.8e-30 135.2 138 62.3
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 3.8e-30 135.2 104 69.2
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 1.4e-29 133.3 107 72.9
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 9.4e-29 130.6 113 70.8
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 9.4e-29 130.6 142 56.3
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 6.7e-27 124.4 110 70.0
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 7.4e-26 120.9 137 56.9
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 3.7e-25 118.6 106 67.0
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 5.3e-24 114.8 142 49.3
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 2.1e-20 102.8 129 55.0
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 4.0e-19 98.6 137 47.4
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 8.8e-19 97.4 107 59.8
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 9.1e-16 87.4 70 75.7
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 7.7e-15 84.3 97 58.8
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 6.5e-14 81.3 80 61.2
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 1.1e-13 80.5 76 55.3
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 2.5e-13 79.3 99 55.6
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 9.4e-13 77.4 113 51.3
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 8.0e-12 74.3 62 69.4
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 1.0e-11 73.9 62 69.4
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 1.8e-11 73.2 106 53.8
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 2.3e-11 72.8 62 67.7
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 8.8e-11 70.9 62 66.1
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 2.6e-10 69.3 63 68.3
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 2.6e-10 69.3 98 53.1
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 3.4e-10 68.9 62 66.1
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 1.3e-09 67.0 43 86.0
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 6.3e-09 64.7 62 64.5
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 8.3e-09 64.3 137 38.0
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 1.4e-08 63.5 68 66.2
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 4.1e-08 62.0 43 76.7
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 7.0e-08 61.2 43 76.7
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 7.0e-08 61.2 96 47.9
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 1.6e-07 60.1 43 74.4
Cre01.g044000 Chlamydomonas reinhardtii HOM05D005631 ORTHO05D006765 4.5e-07 58.5 136 37.5
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 1.0e-06 57.4 127 36.2


User provided reference genes

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