Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G23107 Trifolium pratense HOM05D003758 ORTHO05D004344 2.3e-113 412.1 198 100.0
Medtr4g008840 Medicago truncatula HOM05D003758 ORTHO05D004344 1.0e-92 343.6 192 87.5
Psat7g259120 Pisum sativum HOM05D003758 ORTHO05D004344 3.8e-87 325.1 192 82.8
Psat4g209760 Pisum sativum HOM05D003758 ORTHO05D004344 6.4e-87 324.3 192 81.2
Ca_26914_v3 Cicer arietinum L. HOM05D003758 ORTHO05D004344 6.9e-81 304.3 191 77.5
Ca_29676_v3 Cicer arietinum L. HOM05D003758 ORTHO05D004344 6.9e-81 304.3 191 77.5
Glyma.15G216400 Glycine max HOM05D003758 ORTHO05D004344 1.7e-79 299.7 194 75.3
Glyma.16G071100 Glycine max HOM05D003758 ORTHO05D004344 8.7e-76 287.3 194 73.2
Lj3g0021338 Lotus japonicus HOM05D003758 ORTHO05D004344 4.5e-72 275.0 191 70.2
VMungo1127G2096 Vigna mungo HOM05D003758 ORTHO05D004344 3.5e-69 265.4 194 66.0
Lj4g0003540 Lotus japonicus HOM05D003758 ORTHO05D004344 7.9e-69 264.2 191 69.1
Lalb_Chr02g0146891 Lupinus albus HOM05D003758 ORTHO05D004344 5.1e-68 261.5 194 67.5
arahy.Tifrunner.gnm1.ann1.8X0TS3 Arachis hypogaea HOM05D003758 ORTHO05D004344 2.7e-61 239.2 194 61.3
arahy.Tifrunner.gnm1.ann1.CZ320C Arachis hypogaea HOM05D003758 ORTHO05D004344 3.9e-60 235.3 194 60.3
arahy.Tifrunner.gnm1.ann1.C8HKPK Arachis hypogaea HOM05D003758 ORTHO05D004344 1.2e-45 187.2 194 53.6
Haze_15238 Corylus avellana HOM05D003758 ORTHO05D004344 5.3e-41 171.8 194 47.4
Duzib211G0665 Durio zibethinus HOM05D003758 ORTHO05D004344 3.4e-40 169.1 195 42.6
Cfa004172 Carpinus fangiana HOM05D003758 ORTHO05D004344 5.9e-40 168.3 193 46.6
CiPaw.05G057800 Carya illinoinensis HOM05D003758 ORTHO05D004344 1.7e-39 166.8 192 48.4
CiPaw.13G125700 Carya illinoinensis HOM05D003758 ORTHO05D004344 2.5e-38 162.9 195 46.7
QL03p022487 Quercus lobata HOM05D003758 ORTHO05D004344 4.2e-38 162.2 194 46.9
RcHm_v2.0_Chr3g0487391 Rosa chinensis HOM05D003758 ORTHO05D004344 7.2e-38 161.4 193 44.0
MD17G1277400 Malus domestica HOM05D003758 ORTHO05D004344 1.6e-37 160.2 196 42.9
Atru.chr5.975 Acer truncatum HOM05D003758 ORTHO05D004344 6.1e-37 158.3 196 44.4
CSS0004415 Camellia sinensis var. sinensis HOM05D003758 ORTHO05D004344 7.9e-37 157.9 200 45.0
CANSAT35G0058 Cannabis sativa HOM05D003758 ORTHO05D004344 7.9e-37 157.9 197 47.2
Dinv37509 Davidia involucrata HOM05D003758 ORTHO05D004344 7.9e-37 157.9 201 43.8
Potri.002G194100 Populus trichocarpa HOM05D003758 ORTHO05D004344 7.9e-37 157.9 195 43.1
TWI36G1552 Tripterygium wilfordii HOM05D003758 ORTHO05D004344 1.4e-36 157.1 195 44.6
Cpa.g.sc18.67 Carica papaya HOM05D003758 ORTHO05D004344 3.0e-36 156.0 199 44.2
Ciclev10023744m.g Citrus clementina HOM05D003758 ORTHO05D004344 5.1e-36 155.2 196 41.8
Gohir.A11G108400 Gossypium hirsutum HOM05D003758 ORTHO05D004344 5.1e-36 155.2 195 39.5
COL.COLO4_23214 Corchorus olitorius HOM05D003758 ORTHO05D004344 6.7e-36 154.8 195 40.0
FAN19G1056 Fragaria x ananassa HOM05D003758 ORTHO05D004344 8.8e-36 154.5 193 43.0
Gorai.007G121400 Gossypium raimondii HOM05D003758 ORTHO05D004344 8.8e-36 154.5 195 39.0
CSS0000786 Camellia sinensis var. sinensis HOM05D003758 ORTHO05D004344 1.1e-35 154.1 200 44.0
FAN23G2430 Fragaria x ananassa HOM05D003758 ORTHO05D004344 3.3e-35 152.5 193 42.0
FvH4_1g27070 Fragaria vesca HOM05D003758 ORTHO05D004344 4.4e-35 152.1 193 42.0
Nn6g32438 Nelumbo nucifera HOM05D003758 ORTHO05D004344 7.4e-35 151.4 196 43.9
Phvul.011G184700 Phaseolus vulgaris HOM05D003758 ORTHO05D004344 7.4e-35 151.4 193 43.5
CiPaw.05G057200 Carya illinoinensis HOM05D003758 ORTHO05D004344 9.7e-35 151.0 192 44.8
TAR633G1738 Trochodendron aralioides HOM05D003758 ORTHO05D004344 1.7e-34 150.2 200 41.5
FAN28G1741 Fragaria x ananassa HOM05D003758 ORTHO05D004344 2.2e-34 149.8 193 41.5
Dinv10116 Davidia involucrata HOM05D003758 ORTHO05D004344 3.7e-34 149.1 200 42.5
Thecc.01G315600 Theobroma cacao HOM05D003758 ORTHO05D004344 3.7e-34 149.1 195 39.5
Haze_16412 Corylus avellana HOM05D003758 ORTHO05D004344 1.4e-33 147.1 182 44.5
GSVIVG01038383001 Vitis vinifera HOM05D003758 ORTHO05D004344 4.1e-33 145.6 195 44.6
Nitab4.5_0004743g0050 Nicotiana tabacum HOM05D003758 ORTHO05D004344 5.3e-33 145.2 205 41.5
Nitab4.5_0004412g0060 Nicotiana tabacum HOM05D003758 ORTHO05D004344 7.0e-33 144.8 208 42.3
TAR629G2570 Trochodendron aralioides HOM05D003758 ORTHO05D004344 7.0e-33 144.8 201 41.3
Sed0008176 Sechium edule HOM05D003758 ORTHO05D004344 9.1e-33 144.4 198 41.9
GSVIVG01020570001 Vitis vinifera HOM05D003758 ORTHO05D004344 2.0e-32 143.3 191 42.9
Nitab4.5_0000321g0240 Nicotiana tabacum HOM05D003758 ORTHO05D004344 3.5e-32 142.5 203 40.9
Cc02_g30290 Coffea canephora HOM05D003758 ORTHO05D004344 7.7e-32 141.4 197 40.6
Carub.0004s3002 Capsella rubella HOM05D003758 ORTHO05D004344 1.7e-31 140.2 191 42.9
Rhsim13G0004000 Rhododendron simsii HOM05D003758 ORTHO05D004344 1.7e-31 140.2 202 40.6
Sed0003653 Sechium edule HOM05D003758 ORTHO05D004344 8.5e-31 137.9 206 38.3
Cc00_g01260 Coffea canephora HOM05D003758 ORTHO05D004344 1.5e-30 137.1 196 39.3
MBI19_g03239_MAGBIO Magnolia biondii HOM05D003758 ORTHO05D004344 3.2e-30 136.0 192 41.7
Aqoxy6G02867 Aquilegia oxysepala HOM05D003758 ORTHO05D004344 5.5e-30 135.2 196 38.8
Hund21053 Selenicereus undatus HOM05D003758 ORTHO05D004344 7.2e-30 134.8 205 39.5
vmacro07358 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 1.6e-29 133.7 202 39.1
AL4G46860 Arabidopsis lyrata HOM05D003758 ORTHO05D004344 2.7e-29 132.9 190 42.1
Sc05g0000350 Simmondsia chinensis HOM05D003758 ORTHO05D004344 2.7e-29 132.9 193 39.9
CAN.G135.34 Capsicum annuum HOM05D003758 ORTHO05D004344 3.6e-29 132.5 195 41.0
Peaxi162Scf00192g01619 Petunia axillaris HOM05D003758 ORTHO05D004344 6.1e-29 131.7 198 38.4
Aa31LG1G28620 Aethionema arabicum HOM05D003758 ORTHO05D004344 8.0e-29 131.3 195 40.0
AT2G47300 Arabidopsis thaliana HOM05D003758 ORTHO05D004344 8.0e-29 131.3 191 41.9
CsaV3_4G006310 Cucumis sativus L. HOM05D003758 ORTHO05D004344 8.0e-29 131.3 197 39.6
DCAR_018285 Daucus carota HOM05D003758 ORTHO05D004344 1.0e-28 131.0 200 37.0
vmacro23005 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 1.4e-28 130.6 202 38.1
PGSC0003DMG400027361 Solanum tuberosum HOM05D003758 ORTHO05D004344 3.0e-28 129.4 205 38.5
CARHR142690 Cardamine hirsuta HOM05D003758 ORTHO05D004344 8.8e-28 127.9 190 41.1
Solyc11g007800.3 Solanum lycopersicum HOM05D003758 ORTHO05D004344 2.6e-27 126.3 201 37.8
Sopen11g003660 Solanum pennellii HOM05D003758 ORTHO05D004344 2.6e-27 126.3 205 38.0
Thhalv10024413m.g Eutrema salsugineum HOM05D003758 ORTHO05D004344 4.4e-27 125.6 191 40.8
Oeu049922.1 Olea europaea HOM05D003758 ORTHO05D004344 4.4e-27 125.6 195 39.0
Manes.17G075900 Manihot esculenta HOM05D003758 ORTHO05D004344 5.7e-27 125.2 199 37.2
Manes.05G014400 Manihot esculenta HOM05D003758 ORTHO05D004344 9.7e-27 124.4 196 37.2
Sp7g11950 Schrenkiella parvula HOM05D003758 ORTHO05D004344 9.7e-27 124.4 196 38.3
SalBow3G2832 Salvia bowleyana HOM05D003758 ORTHO05D004344 1.3e-26 124.0 205 39.0
Manes.05G010463 Manihot esculenta HOM05D003758 ORTHO05D004344 1.7e-26 123.6 196 37.2
Manes.05G012284 Manihot esculenta HOM05D003758 ORTHO05D004344 1.7e-26 123.6 196 37.2
Manes.05G014105 Manihot esculenta HOM05D003758 ORTHO05D004344 1.7e-26 123.6 196 37.2
PSO339G3435 Papaver somniferum HOM05D003758 ORTHO05D004344 2.2e-26 123.2 196 37.2
PSO384G2631 Papaver somniferum HOM05D003758 ORTHO05D004344 2.2e-26 123.2 199 37.2
vmacro02393 Vaccinium macrocarpon HOM05D003758 ORTHO05D004344 2.2e-26 123.2 200 38.5
Eucgr.F03545 Eucalyptus grandis HOM05D003758 ORTHO05D004344 2.8e-26 122.9 199 38.2
Manes.08G002202 Manihot esculenta HOM05D003758 ORTHO05D004344 4.8e-26 122.1 196 36.7
Migut.N00382 Erythranthe guttata HOM05D003758 ORTHO05D004344 6.3e-26 121.7 191 38.2
MSTRG.19341 Avicennia marina HOM05D003758 ORTHO05D004344 2.4e-25 119.8 197 36.0
CiPaw.05G057600 Carya illinoinensis HOM05D003758 ORTHO05D004344 3.1e-25 119.4 191 38.7
THA.LOC104807090 Tarenaya hassleriana HOM05D003758 ORTHO05D004344 5.3e-25 118.6 194 39.2
BcaB02g08631 Brassica carinata HOM05D003758 ORTHO05D004344 9.1e-25 117.9 192 40.1
MELO3C016319.2 Cucumis melo HOM05D003758 ORTHO05D004344 9.1e-25 117.9 198 38.9
ECA248G1618 Erigeron canadensis HOM05D003758 ORTHO05D004344 4.5e-24 115.5 196 34.7
PGR044G1293 Punica granatum HOM05D003758 ORTHO05D004344 2.9e-23 112.8 193 33.7
PGR132G0005 Punica granatum HOM05D003758 ORTHO05D004344 2.9e-23 112.8 193 33.7
AUR62011780 Chenopodium quinoa HOM05D003758 ORTHO05D004344 6.5e-23 111.7 189 36.5
A04p08020 Brassica napus HOM05D003758 ORTHO05D004344 1.1e-22 110.9 195 39.5
BraA04t16490Z Brassica rapa HOM05D003758 ORTHO05D004344 1.1e-22 110.9 195 39.5
Lsat_1_v5_gn_1_61501 Lactuca sativa HOM05D003758 ORTHO05D004344 1.1e-22 110.9 198 31.8
SGA_v2.0_scaffold114G31985 Striga asiatica HOM05D003758 ORTHO05D004344 1.5e-22 110.5 196 33.7
BcaC02g09356 Brassica carinata HOM05D003758 ORTHO05D004344 2.5e-22 109.8 195 36.9
C04p41700 Brassica napus HOM05D003758 ORTHO05D004344 2.5e-22 109.8 195 36.9
BolC4t25747H Brassica oleracea HOM05D003758 ORTHO05D004344 2.5e-22 109.8 195 36.9
AUR62024624 Chenopodium quinoa HOM05D003758 ORTHO05D004344 2.5e-22 109.8 189 34.9
HanXRQChr01g0018011 Helianthus annuus HOM05D003758 ORTHO05D004344 6.1e-21 105.1 192 33.3
Os11g0677500 Oryza sativa ssp. japonica HOM05D003758 ORTHO05D004344 3.0e-20 102.8 192 37.0
MD17G1273000 Malus domestica HOM05D003758 ORTHO05D004344 8.8e-20 101.3 173 37.6
Ah.02g112390 Amaranthus hybridus HOM05D003758 ORTHO05D004344 2.8e-18 96.3 194 35.6
Manes.05G007428 Manihot esculenta HOM05D003758 ORTHO05D004344 3.7e-18 95.9 191 30.9
ATR0693G226 Amborella trichopoda HOM05D003758 ORTHO05D004344 1.1e-17 94.4 234 30.3
HPP92_010605 Vanilla planifolia HOM05D003758 ORTHO05D004344 2.4e-17 93.2 191 30.4
unitig_8.g3963 Utricularia gibba HOM05D003758 ORTHO05D004344 3.5e-16 89.4 199 35.7
Prupe.3G010600 Prunus persica HOM05D003758 ORTHO05D004344 1.0e-15 87.8 87 46.0
CDE11G1215 Ceratophyllum demersum HOM05D003758 ORTHO05D004344 3.8e-15 85.9 181 36.5
Gohir.D11G112900 Gossypium hirsutum HOM05D003758 ORTHO05D004344 1.1e-14 84.3 116 35.3
Atru.chr9.1365 Acer truncatum HOM05D003758 ORTHO05D004344 4.0e-12 75.9 133 35.3
Eucgr.D02543 Eucalyptus grandis HOM05D003758 ORTHO05D004344 8.8e-12 74.7 129 34.1
MD17G1275600 Malus domestica HOM05D003758 ORTHO05D004344 8.8e-12 74.7 60 51.7
Os11g0677425 Oryza sativa ssp. japonica HOM05D003758 ORTHO05D004344 1.5e-11 73.9 159 32.7
Aqoxy3G01505 Aquilegia oxysepala HOM05D003758 ORTHO05D004344 3.7e-10 69.3 47 66.0
SalBow1G0003 Salvia bowleyana HOM05D003758 ORTHO05D004344 1.9e-06 57.0 42 52.4


User provided reference genes

Program Settings