Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22999 Trifolium pratense HOM05D005601 ORTHO05D007265 1.6e-266 922.2 444 100.0
Psat1g014320 Pisum sativum HOM05D005601 ORTHO05D007265 1.8e-201 706.1 442 77.1
Lj3g0011890 Lotus japonicus HOM05D005601 ORTHO05D007265 6.9e-182 641.0 443 70.2
Lalb_Chr25g0284511 Lupinus albus HOM05D005601 ORTHO05D007265 1.8e-166 589.7 445 66.1
Glyma.08G165100 Glycine max HOM05D005601 ORTHO05D007265 7.0e-166 587.8 445 66.7
Ca_03553_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 1.1e-163 580.5 443 66.1
Ca_29556_v3 Cicer arietinum L. HOM05D005601 ORTHO05D007265 1.1e-163 580.5 443 66.1
CANSAT56G2459 Cannabis sativa HOM05D005601 ORTHO05D007265 8.0e-154 547.7 442 59.5
Dinv42472 Davidia involucrata HOM05D005601 ORTHO05D007265 8.8e-153 544.3 442 58.8
Lalb_Chr20g0108481 Lupinus albus HOM05D005601 ORTHO05D007265 5.7e-152 541.6 442 62.0
TWI38G0323 Tripterygium wilfordii HOM05D005601 ORTHO05D007265 4.8e-151 538.5 440 58.9
MD05G1234300 Malus domestica HOM05D005601 ORTHO05D007265 9.1e-150 534.3 444 59.5
Prupe.4G131800 Prunus persica HOM05D005601 ORTHO05D007265 9.1e-150 534.3 451 58.3
QL09p016707 Quercus lobata HOM05D005601 ORTHO05D007265 2.7e-149 532.7 449 57.0
CiPaw.11G059700 Carya illinoinensis HOM05D005601 ORTHO05D007265 1.0e-148 530.8 442 58.1
QL04p090699 Quercus lobata HOM05D005601 ORTHO05D007265 1.0e-148 530.8 449 56.8
Manes.14G007400 Manihot esculenta HOM05D005601 ORTHO05D007265 1.5e-147 526.9 440 58.2
Peaxi162Scf00452g00334 Petunia axillaris HOM05D005601 ORTHO05D007265 1.5e-147 526.9 444 56.1
MELO3C012601.2 Cucumis melo HOM05D005601 ORTHO05D007265 2.5e-147 526.2 444 57.9
Eucgr.F04464 Eucalyptus grandis HOM05D005601 ORTHO05D007265 3.3e-147 525.8 440 58.0
Potri.010G172300 Populus trichocarpa HOM05D005601 ORTHO05D007265 3.3e-147 525.8 450 57.6
CSS0009872 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 4.2e-147 525.4 442 57.2
Sopen07g034790 Solanum pennellii HOM05D005601 ORTHO05D007265 4.2e-147 525.4 444 56.5
ClCG09G022740 Citrullus lanatus HOM05D005601 ORTHO05D007265 5.5e-147 525.0 457 56.5
CSS0045419 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.2e-146 523.9 442 57.0
MD10G1210800 Malus domestica HOM05D005601 ORTHO05D007265 1.2e-146 523.9 445 58.4
PGSC0003DMG400022116 Solanum tuberosum HOM05D005601 ORTHO05D007265 2.1e-146 523.1 445 56.6
Solyc07g066640.3 Solanum lycopersicum HOM05D005601 ORTHO05D007265 3.6e-146 522.3 444 56.3
Sed0023216 Sechium edule HOM05D005601 ORTHO05D007265 1.4e-145 520.4 442 57.2
CAN.G943.56 Capsicum annuum HOM05D005601 ORTHO05D007265 1.8e-145 520.0 444 56.1
PGR031G2718 Punica granatum HOM05D005601 ORTHO05D007265 2.3e-145 519.6 468 55.1
Potri.008G084100 Populus trichocarpa HOM05D005601 ORTHO05D007265 1.5e-144 516.9 446 58.1
GSVIVG01020400001 Vitis vinifera HOM05D005601 ORTHO05D007265 2.0e-144 516.5 442 57.0
CsaV3_7G022950 Cucumis sativus L. HOM05D005601 ORTHO05D007265 2.6e-144 516.2 442 56.3
Nitab4.5_0006109g0020 Nicotiana tabacum HOM05D005601 ORTHO05D007265 2.2e-143 513.1 444 55.6
Nitab4.5_0000029g0250 Nicotiana tabacum HOM05D005601 ORTHO05D007265 6.3e-143 511.5 434 56.2
SGA_v2.0_scaffold7G03617 Striga asiatica HOM05D005601 ORTHO05D007265 3.1e-142 509.2 449 55.9
Ciclev10006846m.g Citrus clementina HOM05D005601 ORTHO05D007265 4.1e-142 508.8 430 57.9
Migut.M01519 Erythranthe guttata HOM05D005601 ORTHO05D007265 5.4e-142 508.4 444 54.5
FvH4_3g14650 Fragaria vesca HOM05D005601 ORTHO05D007265 5.9e-141 505.0 448 55.6
Atru.chr1.81 Acer truncatum HOM05D005601 ORTHO05D007265 1.1e-139 500.7 442 55.9
arahy.Tifrunner.gnm1.ann1.5WL8RC Arachis hypogaea HOM05D005601 ORTHO05D007265 1.9e-139 500.0 395 62.5
FAN11G1412 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.9e-139 500.0 458 54.1
RcHm_v2.0_Chr5g0024141 Rosa chinensis HOM05D005601 ORTHO05D007265 2.5e-139 499.6 445 55.5
Lj2A13G19 Lonicera japonica HOM05D005601 ORTHO05D007265 1.2e-138 497.3 441 54.6
BcaB02g06608 Brassica carinata HOM05D005601 ORTHO05D007265 3.6e-138 495.7 444 54.3
BcaC05g25587 Brassica carinata HOM05D005601 ORTHO05D007265 3.6e-138 495.7 444 55.0
C05p14450 Brassica napus HOM05D005601 ORTHO05D007265 3.6e-138 495.7 444 55.0
Rhsim06G0242900 Rhododendron simsii HOM05D005601 ORTHO05D007265 8.0e-138 494.6 507 50.1
THA.LOC104812373 Tarenaya hassleriana HOM05D005601 ORTHO05D007265 8.0e-138 494.6 468 52.1
BolC5t30171H Brassica oleracea HOM05D005601 ORTHO05D007265 1.0e-137 494.2 444 54.7
A06p12210 Brassica napus HOM05D005601 ORTHO05D007265 1.4e-137 493.8 444 55.0
BraA06t24389Z Brassica rapa HOM05D005601 ORTHO05D007265 1.4e-137 493.8 444 55.0
Carub.0001s1603 Capsella rubella HOM05D005601 ORTHO05D007265 1.4e-137 493.8 443 54.4
Sabra10G0131500 Salix brachista HOM05D005601 ORTHO05D007265 1.4e-137 493.8 444 55.0
AT1G16290 Arabidopsis thaliana HOM05D005601 ORTHO05D007265 5.2e-137 491.9 443 54.6
PSO675G6728 Papaver somniferum HOM05D005601 ORTHO05D007265 1.5e-136 490.3 442 53.8
vmacro11692 Vaccinium macrocarpon HOM05D005601 ORTHO05D007265 2.0e-136 490.0 495 49.3
AL1G28410 Arabidopsis lyrata HOM05D005601 ORTHO05D007265 4.4e-136 488.8 443 54.9
Thhalv10007775m.g Eutrema salsugineum HOM05D005601 ORTHO05D007265 9.8e-136 487.6 443 55.3
Thecc.07G184900 Theobroma cacao HOM05D005601 ORTHO05D007265 9.8e-136 487.6 442 54.1
Sp1g14480 Schrenkiella parvula HOM05D005601 ORTHO05D007583 1.7e-135 486.9 433 54.7
Gorai.002G109700 Gossypium raimondii HOM05D005601 ORTHO05D007265 1.1e-134 484.2 442 52.7
CARHR016760 Cardamine hirsuta HOM05D005601 ORTHO05D007265 1.9e-134 483.4 443 53.7
Sc09g0007790 Simmondsia chinensis HOM05D005601 ORTHO05D007265 4.1e-134 482.3 440 53.4
Nn7g38204 Nelumbo nucifera HOM05D005601 ORTHO05D007265 5.4e-134 481.9 442 53.2
Aa31LG7G820 Aethionema arabicum HOM05D005601 ORTHO05D007265 2.7e-133 479.6 443 54.4
SalBow8G4673 Salvia bowleyana HOM05D005601 ORTHO05D007265 2.3e-132 476.5 435 54.0
MSTRG.7080 Avicennia marina HOM05D005601 ORTHO05D007265 1.6e-130 470.3 448 52.5
Aqoxy1G01411 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 8.0e-130 468.0 443 52.6
TAR627G0482 Trochodendron aralioides HOM05D005601 ORTHO05D007265 1.9e-126 456.8 390 55.9
Gorai.013G145200 Gossypium raimondii HOM05D005601 ORTHO05D007265 2.4e-126 456.4 441 51.5
DCAR_016842 Daucus carota HOM05D005601 ORTHO05D000532 4.1e-126 455.7 447 50.1
Zm00001eb207280 Zea mays HOM05D005601 ORTHO05D007265 4.1e-126 455.7 442 51.8
Gohir.D13G129200 Gossypium hirsutum HOM05D005601 ORTHO05D007265 2.1e-125 453.4 441 51.2
Gohir.A13G125400 Gossypium hirsutum HOM05D005601 ORTHO05D007265 1.7e-124 450.3 440 51.1
Oeu019720.3 Olea europaea HOM05D005601 ORTHO05D007265 3.3e-123 446.0 447 50.6
Aqoxy72s008 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 1.1e-121 441.0 443 50.8
FAN21G2538 Fragaria x ananassa HOM05D005601 ORTHO05D007265 3.0e-116 422.9 449 48.1
Cc05_g16460 Coffea canephora HOM05D005601 ORTHO05D007265 2.2e-111 406.8 367 55.9
FAN16G1778 Fragaria x ananassa HOM05D005601 ORTHO05D007265 1.1e-110 404.4 449 47.0
SMO196G0059 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 9.6e-107 391.3 428 46.0
SMO137G0068 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 6.2e-106 388.7 440 43.4
Sabra08G0062400 Salix brachista HOM05D005601 ORTHO05D007265 1.1e-105 387.9 481 45.7
Gohir.D01G084000 Gossypium hirsutum HOM05D005601 ORTHO05D007265 8.4e-103 378.3 366 51.1
MBI02_g08257_MAGBIO Magnolia biondii HOM05D005601 ORTHO05D007265 8.4e-103 378.3 360 52.2
Gohir.A01G099600 Gossypium hirsutum HOM05D005601 ORTHO05D007265 4.8e-98 362.5 351 50.4
Mapoly0008s0010 Marchantia polymorpha HOM05D005601 ORTHO05D007265 1.4e-94 350.9 462 39.4
Pp3c5_22590 Physcomitrium patens HOM05D005601 ORTHO05D007265 3.5e-93 346.3 520 38.1
CBR_g32054 Chara braunii HOM05D005601 ORTHO05D007265 1.1e-91 341.3 439 39.4
AagrBONN_evm.TU.Sc2ySwM_117.1218 Anthoceros agrestis HOM05D005601 ORTHO05D007265 5.6e-91 339.0 416 41.6
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.1e-73 281.6 401 37.9
Dinv19582 Davidia involucrata HOM05D005601 ORTHO05D007265 1.6e-69 267.7 200 64.0
unitig_26.g10063 Utricularia gibba HOM05D005601 ORTHO05D007265 1.0e-68 265.0 264 49.6
Haze_07789 Corylus avellana HOM05D005601 ORTHO05D007265 1.5e-67 261.2 188 62.8
Oeu034984.1 Olea europaea HOM05D005601 ORTHO05D007265 6.3e-66 255.8 202 58.9
Dinv19583 Davidia involucrata HOM05D005601 ORTHO05D007265 2.5e-62 243.8 187 61.0
HPP92_016685 Vanilla planifolia HOM05D005601 ORTHO05D007265 3.6e-53 213.4 185 49.7
Actinidia24664 Actinidia chinensis HOM05D005601 ORTHO05D007265 2.6e-51 207.2 186 52.7
arahy.Tifrunner.gnm1.ann1.4IME1R Arachis hypogaea HOM05D005601 ORTHO05D007265 4.5e-48 196.4 152 61.8
ATR0752G040 Amborella trichopoda HOM05D005601 ORTHO05D007265 2.6e-43 180.6 147 53.1
HPP92_016686 Vanilla planifolia HOM05D005601 ORTHO05D007265 2.8e-42 177.2 160 52.5
CSS0035233 Camellia sinensis var. sinensis HOM05D005601 ORTHO05D007265 1.4e-36 158.3 104 66.3
Aqoxy4G01783 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 7.0e-33 146.0 119 55.5
Aqoxy5G02624 Aquilegia oxysepala HOM05D005601 ORTHO05D007265 4.5e-32 143.3 118 55.9
Sabra07G0054400 Salix brachista HOM05D005601 ORTHO05D007265 4.5e-32 143.3 153 52.3
unitig_26.g10062 Utricularia gibba HOM05D000493 ORTHO05D008479 5.9e-32 142.9 103 63.1
Sabra07G0054100 Salix brachista HOM05D005601 ORTHO05D007265 7.7e-32 142.5 153 52.3
Sabra07G0054700 Salix brachista HOM05D005601 ORTHO05D007265 7.7e-32 142.5 153 52.3
Sabra07G0055500 Salix brachista HOM05D005601 ORTHO05D007265 7.7e-32 142.5 153 52.3
ATR0752G225 Amborella trichopoda HOM05D005601 ORTHO05D007265 1.7e-31 141.4 124 56.5
Sabra07G0055700 Salix brachista HOM05D005601 ORTHO05D007265 2.9e-26 124.0 135 53.3
SEGI_07478 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 3.2e-25 120.6 127 46.5
Medtr2g065540 Medicago truncatula HOM05D005601 ORTHO05D007265 4.1e-25 120.2 58 89.7
Cc01_g09470 Coffea canephora HOM05D005601 ORTHO05D007265 1.6e-24 118.2 88 61.4
Cpa.g.sc32.54 Carica papaya HOM05D005601 ORTHO05D007265 4.6e-24 116.7 84 59.5
Cc05_g16470 Coffea canephora HOM05D005601 ORTHO05D007265 1.3e-23 115.2 80 62.5
SEGI_03880 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 5.0e-23 113.2 80 60.0
SEGI_07505 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 6.6e-23 112.8 113 45.1
Zm00001eb338130 Zea mays HOM05D005601 ORTHO05D007265 2.8e-21 107.5 129 48.8
SEGI_02544 Sequoiadendron giganteum HOM05D005601 ORTHO05D007265 4.7e-21 106.7 87 50.6
Sabra07G0055000 Salix brachista HOM05D005601 ORTHO05D007265 1.4e-17 95.1 95 54.7
SHI32862 Sapria himalayana HOM05D005601 ORTHO05D007265 4.1e-17 93.6 60 66.7
SHI32865 Sapria himalayana HOM05D005601 ORTHO05D007265 5.0e-15 86.7 86 50.0
SHI32867 Sapria himalayana HOM05D005601 ORTHO05D007265 1.8e-12 78.2 60 56.7
ATR0752G173 Amborella trichopoda HOM05D005601 ORTHO05D007265 2.0e-11 74.7 67 53.7
Zm00001eb249880 Zea mays HOM05D005601 ORTHO05D007265 9.8e-11 72.4 53 62.3
SHI32866 Sapria himalayana HOM05D005601 ORTHO05D007265 1.1e-09 68.9 82 45.1
PRCOL_00003152 Prasinoderma coloniale HOM05D005601 ORTHO05D007265 2.4e-09 67.8 150 30.0
HPP92_016689 Vanilla planifolia HOM05D005601 ORTHO05D007265 1.3e-07 62.0 37 62.2
Zm00001eb234590 Zea mays HOM05D000076 ORTHO05D007265 8.6e-07 59.3 42 64.3
Cpa.g.sc32.60 Carica papaya HOM05D005601 ORTHO05D000047 4.3e-06 57.0 42 61.9
Zm00001eb316750 Zea mays HOM05D000076 ORTHO05D001279 4.3e-06 57.0 42 61.9


User provided reference genes

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