Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22923 Trifolium pratense HOM05D000094 ORTHO05D003883 1.1e-85 320.9 301 100.0
TPR.G2016 Trifolium pratense HOM05D000094 ORTHO05D003883 2.8e-49 199.9 105 90.5
Medtr4g109170 Medicago truncatula HOM05D000094 ORTHO05D003883 4.9e-46 189.1 104 84.6
Psat4g048960 Pisum sativum HOM05D000094 ORTHO05D003883 4.1e-45 186.0 104 84.6
Ca_21796_v3 Cicer arietinum L. HOM05D000094 ORTHO05D003883 1.2e-44 184.5 102 83.3
Lj4g0006714 Lotus japonicus HOM05D000094 ORTHO05D003883 2.8e-41 173.3 103 77.7
Lalb_Chr07g0178211 Lupinus albus HOM05D000094 ORTHO05D003883 2.0e-39 167.2 104 72.1
Glyma.05G024000 Glycine max HOM05D000094 ORTHO05D003883 3.4e-39 166.4 104 73.1
Glyma.17G103400 Glycine max HOM05D000094 ORTHO05D003883 4.4e-39 166.0 104 73.1
Lalb_Chr13g0303021 Lupinus albus HOM05D000094 ORTHO05D003883 4.4e-39 166.0 104 73.1
VMungo1215G0882 Vigna mungo HOM05D000094 ORTHO05D003883 7.6e-39 165.2 104 72.1
Phvul.003G187200 Phaseolus vulgaris HOM05D000094 ORTHO05D003883 1.7e-38 164.1 104 71.2
COL.COLO4_09314 Corchorus olitorius HOM05D000094 ORTHO05D003883 2.9e-38 163.3 105 72.4
arahy.Tifrunner.gnm1.ann1.09KCYQ Arachis hypogaea HOM05D000094 ORTHO05D003883 9.2e-37 158.3 104 72.1
arahy.Tifrunner.gnm1.ann1.7LNN3Z Arachis hypogaea HOM05D000094 ORTHO05D003883 9.2e-37 158.3 104 72.1
Phvul.009G184500 Phaseolus vulgaris HOM05D000094 ORTHO05D003883 1.2e-36 157.9 112 67.0
Thecc.03G095500 Theobroma cacao HOM05D000094 ORTHO05D003883 1.2e-36 157.9 104 69.2
Lalb_Chr11g0063591 Lupinus albus HOM05D000094 ORTHO05D003883 2.7e-36 156.8 103 72.8
Glyma.04G165400 Glycine max HOM05D000094 ORTHO05D003883 4.6e-36 156.0 106 70.8
Gohir.A12G180000 Gossypium hirsutum HOM05D000094 ORTHO05D003883 7.8e-36 155.2 105 67.6
Medtr3g437630 Medicago truncatula HOM05D000094 ORTHO05D003883 1.3e-35 154.5 106 68.9
Duzib084G0520 Durio zibethinus HOM05D000094 ORTHO05D003883 1.7e-35 154.1 105 66.7
Gohir.D12G182700 Gossypium hirsutum HOM05D000094 ORTHO05D003883 2.3e-35 153.7 104 68.3
Gorai.008G195900 Gossypium raimondii HOM05D000094 ORTHO05D003883 2.3e-35 153.7 104 68.3
Lj1g0009482 Lotus japonicus HOM05D000094 ORTHO05D003883 3.9e-35 152.9 105 66.7
TPR.G12164 Trifolium pratense HOM05D000094 ORTHO05D003883 3.9e-35 152.9 106 68.9
Ca_13851_v3 Cicer arietinum L. HOM05D000094 ORTHO05D003883 5.1e-35 152.5 106 67.0
Gohir.A11G032700 Gossypium hirsutum HOM05D000094 ORTHO05D003883 5.1e-35 152.5 105 66.7
QL10p018422 Quercus lobata HOM05D000094 ORTHO05D003883 5.1e-35 152.5 104 66.3
QL93p1911_0018 Quercus lobata HOM05D000094 ORTHO05D003883 5.1e-35 152.5 104 66.3
TPR.G24004 Trifolium pratense HOM05D000094 ORTHO05D003883 6.6e-35 152.1 242 53.7
Duzib068G1153 Durio zibethinus HOM05D000094 ORTHO05D003883 1.1e-34 151.4 105 67.6
Duzib205G0530 Durio zibethinus HOM05D000094 ORTHO05D003883 1.1e-34 151.4 105 66.7
MD06G1198600 Malus domestica HOM05D000094 ORTHO05D003883 1.1e-34 151.4 112 61.6
Lj5C106T19 Lonicera japonica HOM05D000094 ORTHO05D003883 1.5e-34 151.0 104 65.4
Gohir.D11G036000 Gossypium hirsutum HOM05D000094 ORTHO05D003883 2.5e-34 150.2 103 67.0
Gorai.007G038800 Gossypium raimondii HOM05D000094 ORTHO05D003883 2.5e-34 150.2 103 67.0
CiPaw.11G048900 Carya illinoinensis HOM05D000094 ORTHO05D003883 3.3e-34 149.8 105 64.8
TAR371G0333 Trochodendron aralioides HOM05D000094 ORTHO05D003883 3.3e-34 149.8 102 64.7
VMungo1309G1569 Vigna mungo HOM05D000094 ORTHO05D003883 4.3e-34 149.4 106 67.0
Sed0000849 Sechium edule HOM05D000094 ORTHO05D003883 5.6e-34 149.1 101 68.3
Sed0022527 Sechium edule HOM05D000094 ORTHO05D003883 5.6e-34 149.1 101 68.3
Sed0022739 Sechium edule HOM05D000094 ORTHO05D003883 5.6e-34 149.1 101 68.3
Haze_07667 Corylus avellana HOM05D000094 ORTHO05D003883 7.3e-34 148.7 104 63.5
Glyma.06G197600 Glycine max HOM05D000094 ORTHO05D003883 7.3e-34 148.7 106 65.1
Os07g0597200 Oryza sativa ssp. japonica HOM05D000094 ORTHO05D003883 7.3e-34 148.7 105 63.8
Potri.015G061600 Populus trichocarpa HOM05D000094 ORTHO05D003883 7.3e-34 148.7 104 61.5
Rhsim12G0153400 Rhododendron simsii HOM05D000094 ORTHO05D003883 9.6e-34 148.3 107 63.6
Dinv38759 Davidia involucrata HOM05D000094 ORTHO05D003883 1.2e-33 147.9 103 65.0
Psat5g201600 Pisum sativum HOM05D000094 ORTHO05D003883 1.6e-33 147.5 106 66.0
Potri.012G067600 Populus trichocarpa HOM05D000094 ORTHO05D003883 1.6e-33 147.5 101 63.4
Duzib084G0626 Durio zibethinus HOM05D000094 ORTHO05D003883 2.1e-33 147.1 104 67.3
Sabra15G0086600 Salix brachista HOM05D000094 ORTHO05D003883 2.1e-33 147.1 104 61.5
Ah.11g048140 Amaranthus hybridus HOM05D000094 ORTHO05D003883 2.8e-33 146.7 104 64.4
ClCG06G015910 Citrullus lanatus HOM05D000094 ORTHO05D003883 2.8e-33 146.7 101 65.3
Haze_07663 Corylus avellana HOM05D000094 ORTHO05D003883 2.8e-33 146.7 104 62.5
CsaV3_1G002640 Cucumis sativus L. HOM05D000094 ORTHO05D003883 3.6e-33 146.4 103 65.0
Nitab4.5_0002756g0050 Nicotiana tabacum HOM05D000094 ORTHO05D003883 3.6e-33 146.4 103 64.1
Solyc03g115610.3 Solanum lycopersicum HOM05D000094 ORTHO05D003883 3.6e-33 146.4 103 65.0
Sopen03g034600 Solanum pennellii HOM05D000094 ORTHO05D003883 3.6e-33 146.4 103 65.0
PGSC0003DMG400024661 Solanum tuberosum HOM05D000094 ORTHO05D003883 3.6e-33 146.4 103 65.0
Lj9A468G55 Lonicera japonica HOM05D000094 ORTHO05D003883 4.7e-33 146.0 105 63.8
SGA_v2.0_scaffold25G10942 Striga asiatica HOM05D000094 ORTHO05D003883 4.7e-33 146.0 105 60.0
Carub.0002s2099 Capsella rubella HOM05D000094 ORTHO05D003883 6.2e-33 145.6 107 62.6
Cfa019284 Carpinus fangiana HOM05D000094 ORTHO05D003883 6.2e-33 145.6 104 62.5
Manes.14G082600 Manihot esculenta HOM05D000094 ORTHO05D003883 6.2e-33 145.6 101 63.4
Atru.chr9.309 Acer truncatum HOM05D000094 ORTHO05D003883 8.1e-33 145.2 105 64.8
Nitab4.5_0001211g0100 Nicotiana tabacum HOM05D000094 ORTHO05D003883 8.1e-33 145.2 104 62.5
CAN.G479.47 Capsicum annuum HOM05D000094 ORTHO05D003883 1.1e-32 144.8 103 65.0
MELO3C017200.2 Cucumis melo HOM05D000094 ORTHO05D003883 1.1e-32 144.8 101 65.3
Dinv10675 Davidia involucrata HOM05D000094 ORTHO05D003883 1.1e-32 144.8 110 59.1
Peaxi162Scf00274g00037 Petunia axillaris HOM05D000094 ORTHO05D003883 1.1e-32 144.8 103 63.1
Prupe.5G199400 Prunus persica HOM05D000094 ORTHO05D003883 1.4e-32 144.4 103 63.1
CSS0043411 Camellia sinensis var. sinensis HOM05D000094 ORTHO05D003883 1.8e-32 144.1 104 66.3
FAN13G1229 Fragaria x ananassa HOM05D000094 ORTHO05D003883 1.8e-32 144.1 102 65.7
MD14G1206100 Malus domestica HOM05D000094 ORTHO05D003883 1.8e-32 144.1 104 60.6
FAN08G2170 Fragaria x ananassa HOM05D000094 ORTHO05D003883 2.4e-32 143.7 109 62.4
Actinidia04858 Actinidia chinensis HOM05D000094 ORTHO05D003883 3.1e-32 143.3 103 63.1
FvH4_5g14410 Fragaria vesca HOM05D000094 ORTHO05D003883 3.1e-32 143.3 102 65.7
FAN18G3591 Fragaria x ananassa HOM05D000094 ORTHO05D003883 3.1e-32 143.3 102 65.7
Hund02617 Selenicereus undatus HOM05D000094 ORTHO05D003883 4.0e-32 142.9 103 61.2
QL93p1911_0006 Quercus lobata HOM05D000094 ORTHO05D003883 5.3e-32 142.5 106 62.3
RcHm_v2.0_Chr7g0182251 Rosa chinensis HOM05D000094 ORTHO05D003883 5.3e-32 142.5 104 65.4
CiPaw.11G048600 Carya illinoinensis HOM05D000094 ORTHO05D003883 6.9e-32 142.1 105 62.9
arahy.Tifrunner.gnm1.ann1.SDCR6H Arachis hypogaea HOM05D000094 ORTHO05D003883 9.0e-32 141.7 106 59.4
QL10p018435 Quercus lobata HOM05D000094 ORTHO05D003883 9.0e-32 141.7 104 63.5
Aa31LG4G4610 Aethionema arabicum HOM05D000094 ORTHO05D003883 1.2e-31 141.4 107 60.7
Oeu047268.1 Olea europaea HOM05D000094 ORTHO05D003883 1.2e-31 141.4 108 56.5
CiPaw.12G010600 Carya illinoinensis HOM05D000094 ORTHO05D003883 1.5e-31 141.0 102 65.7
AUR62021617 Chenopodium quinoa HOM05D000094 ORTHO05D003883 1.5e-31 141.0 101 62.4
PGR083G0673 Punica granatum HOM05D000094 ORTHO05D003883 1.5e-31 141.0 109 60.6
PGR089G0006 Punica granatum HOM05D000094 ORTHO05D003883 1.5e-31 141.0 109 60.6
Thhalv10018042m.g Eutrema salsugineum HOM05D000094 ORTHO05D003883 2.0e-31 140.6 108 61.1
CANSAT80G0542 Cannabis sativa HOM05D000094 ORTHO05D003883 2.6e-31 140.2 105 62.9
AUR62008474 Chenopodium quinoa HOM05D000094 ORTHO05D003883 2.6e-31 140.2 101 61.4
Actinidia09235 Actinidia chinensis HOM05D000094 ORTHO05D003883 3.4e-31 139.8 101 63.4
arahy.Tifrunner.gnm1.ann1.A1HR66 Arachis hypogaea HOM05D000094 ORTHO05D003883 3.4e-31 139.8 106 58.5
Sc04g0002940 Simmondsia chinensis HOM05D000094 ORTHO05D003883 3.4e-31 139.8 98 62.2
Cpa.g.c30789.1 Carica papaya HOM05D000094 ORTHO05D003883 4.4e-31 139.4 101 60.4
THA.LOC104812094 Tarenaya hassleriana HOM05D000094 ORTHO05D003883 4.4e-31 139.4 104 61.5
ATR0706G255 Amborella trichopoda HOM05D000094 ORTHO05D003883 5.8e-31 139.0 107 58.9
Aqoxy3G03541 Aquilegia oxysepala HOM05D000094 ORTHO05D003883 5.8e-31 139.0 98 62.2
AL2G34210 Arabidopsis lyrata HOM05D000094 ORTHO05D003883 5.8e-31 139.0 105 60.0
AT1G74360 Arabidopsis thaliana HOM05D000094 ORTHO05D003883 5.8e-31 139.0 105 60.0
MSTRG.11363 Avicennia marina HOM05D000094 ORTHO05D003883 5.8e-31 139.0 103 60.2
MSTRG.22990 Avicennia marina HOM05D000094 ORTHO05D003883 5.8e-31 139.0 105 57.1
EL10Ac5g11076 Beta vulgaris HOM05D000094 ORTHO05D003883 5.8e-31 139.0 101 61.4
C06p48520 Brassica napus HOM05D000094 ORTHO05D003883 5.8e-31 139.0 107 59.8
Migut.I00251 Erythranthe guttata HOM05D000094 ORTHO05D003883 5.8e-31 139.0 104 60.6
Nn4g23316 Nelumbo nucifera HOM05D000094 ORTHO05D003883 7.6e-31 138.7 101 60.4
DCAR_016586 Daucus carota HOM05D000094 ORTHO05D003883 9.9e-31 138.3 104 60.6
BolC6t39881H Brassica oleracea HOM05D000094 ORTHO05D003883 2.2e-30 137.1 107 58.9
Actinidia19014 Actinidia chinensis HOM05D000094 ORTHO05D003883 2.9e-30 136.7 104 61.5
Nn3g17366 Nelumbo nucifera HOM05D000094 ORTHO05D003883 2.9e-30 136.7 100 57.0
A07p40170 Brassica napus HOM05D000094 ORTHO05D003883 4.9e-30 136.0 107 57.9
BraA07t31561Z Brassica rapa HOM05D000094 ORTHO05D003883 4.9e-30 136.0 107 57.9
ECA247G0942 Erigeron canadensis HOM05D000094 ORTHO05D003883 4.9e-30 136.0 103 62.1
CSS0041086 Camellia sinensis var. sinensis HOM05D000094 ORTHO05D003883 6.4e-30 135.6 101 63.4
Zm00001eb326660 Zea mays HOM05D000094 ORTHO05D003883 6.4e-30 135.6 106 58.5
DCAR_021513 Daucus carota HOM05D000094 ORTHO05D003883 1.1e-29 134.8 95 62.1
Thhalv10019818m.g Eutrema salsugineum HOM05D000094 ORTHO05D003883 1.1e-29 134.8 108 58.3
Lsat_1_v5_gn_4_109800 Lactuca sativa HOM05D000094 ORTHO05D003883 1.1e-29 134.8 103 59.2
Cc04_g14860 Coffea canephora HOM05D000094 ORTHO05D003883 1.4e-29 134.4 104 57.7
HanXRQChr02g0042531 Helianthus annuus HOM05D000094 ORTHO05D003883 1.4e-29 134.4 102 63.7
Nn3g17365 Nelumbo nucifera HOM05D000094 ORTHO05D003883 1.4e-29 134.4 101 55.4
MBI16_g12448_MAGBIO Magnolia biondii HOM05D000094 ORTHO05D003883 4.2e-29 132.9 103 56.3
MBI16_g38905_MAGBIO Magnolia biondii HOM05D000094 ORTHO05D003883 4.2e-29 132.9 103 56.3
Sp5g29520 Schrenkiella parvula HOM05D000094 ORTHO05D003883 4.2e-29 132.9 107 57.9
TWI15G0904 Tripterygium wilfordii HOM05D000094 ORTHO05D003883 4.2e-29 132.9 101 57.4
CDE02G0034 Ceratophyllum demersum HOM05D000094 ORTHO05D003883 5.4e-29 132.5 104 55.8
Ciclev10024165m.g Citrus clementina HOM05D000094 ORTHO05D003883 5.4e-29 132.5 102 60.8
CARHR289450 Cardamine hirsuta HOM05D000094 ORTHO05D003883 9.3e-29 131.7 97 62.9
Lsat_1_v5_gn_1_13380 Lactuca sativa HOM05D000094 ORTHO05D003883 1.6e-28 131.0 101 60.4
CDE04G2294 Ceratophyllum demersum HOM05D000094 ORTHO05D003883 2.7e-28 130.2 110 51.8
FAN17G0783 Fragaria x ananassa HOM05D000094 ORTHO05D003883 2.7e-28 130.2 109 56.9
ECA232G3243 Erigeron canadensis HOM05D000094 ORTHO05D003883 3.5e-28 129.8 101 58.4
FvH4_4g04300 Fragaria vesca HOM05D000094 ORTHO05D003883 3.5e-28 129.8 102 59.8
FAN12G3815 Fragaria x ananassa HOM05D000094 ORTHO05D003883 3.5e-28 129.8 102 59.8
FAN22G2103 Fragaria x ananassa HOM05D000094 ORTHO05D003883 3.5e-28 129.8 102 59.8
TWI81G0492 Tripterygium wilfordii HOM05D000094 ORTHO05D003883 3.5e-28 129.8 101 57.4
DCAR_026030 Daucus carota HOM05D000094 ORTHO05D003883 1.0e-27 128.3 101 59.4
Gohir.A01G200700 Gossypium hirsutum HOM05D000094 ORTHO05D003883 1.0e-27 128.3 101 55.4
Gohir.D01G190700 Gossypium hirsutum HOM05D000094 ORTHO05D003883 1.0e-27 128.3 101 55.4
HanXRQChr16g0502551 Helianthus annuus HOM05D000094 ORTHO05D003883 1.0e-27 128.3 101 58.4
Duzib093G0312 Durio zibethinus HOM05D000094 ORTHO05D003883 1.7e-27 127.5 104 53.8
Nitab4.5_0003021g0040 Nicotiana tabacum HOM05D000094 ORTHO05D003883 1.7e-27 127.5 103 55.3
BcaC05g24572 Brassica carinata HOM05D000094 ORTHO05D003883 5.1e-27 125.9 107 53.3
Gorai.002G234500 Gossypium raimondii HOM05D000094 ORTHO05D003883 5.1e-27 125.9 101 54.5
Duzib106G1202 Durio zibethinus HOM05D000094 ORTHO05D003883 1.5e-26 124.4 103 53.4
Actinidia35014 Actinidia chinensis HOM05D000094 ORTHO05D003883 1.9e-26 124.0 100 56.0
Peaxi162Scf00013g00047 Petunia axillaris HOM05D000094 ORTHO05D003883 1.9e-26 124.0 103 55.3
A02p19160 Brassica napus HOM05D000094 ORTHO05D003883 2.5e-26 123.6 108 57.4
Nitab4.5_0004771g0030 Nicotiana tabacum HOM05D000094 ORTHO05D003883 3.3e-26 123.2 103 55.3
COL.COLO4_29556 Corchorus olitorius HOM05D004426 ORTHO05D005417 4.3e-26 122.9 103 52.4
CAN.G587.16 Capsicum annuum HOM05D000094 ORTHO05D003883 2.8e-25 120.2 103 51.5
A02p12680 Brassica napus HOM05D000094 ORTHO05D003883 3.6e-25 119.8 106 50.0
C02p20740 Brassica napus HOM05D000094 ORTHO05D003883 3.6e-25 119.8 106 50.0
BraA02t06325Z Brassica rapa HOM05D000094 ORTHO05D003883 3.6e-25 119.8 106 50.0
PGSC0003DMG400033049 Solanum tuberosum HOM05D000094 ORTHO05D003883 3.6e-25 119.8 105 52.4
Sp6g07570 Schrenkiella parvula HOM05D000094 ORTHO05D003883 8.1e-25 118.6 105 53.3
Solyc06g069650.4 Solanum lycopersicum HOM05D000094 ORTHO05D003883 1.8e-24 117.5 105 51.4
BraA02t06966Z Brassica rapa HOM05D000094 ORTHO05D003883 4.0e-24 116.3 107 51.4
BcaC03g15488 Brassica carinata HOM05D000094 ORTHO05D003883 5.3e-24 115.9 108 53.7
BcaC03g15490 Brassica carinata HOM05D006637 ORTHO05D001736 5.3e-24 115.9 107 51.4
C02p31740 Brassica napus HOM05D000094 ORTHO05D003883 5.3e-24 115.9 108 53.7
C02p31760 Brassica napus HOM05D000094 ORTHO05D003883 5.3e-24 115.9 107 51.4
BolC2t09204H Brassica oleracea HOM05D000094 ORTHO05D003883 5.3e-24 115.9 107 51.4
Sopen06g026950 Solanum pennellii HOM05D000094 ORTHO05D003883 9.0e-24 115.2 105 50.5
Thecc.05G105800 Theobroma cacao HOM05D000094 ORTHO05D003883 1.2e-23 114.8 102 52.9
CDE11G0985 Ceratophyllum demersum HOM05D000094 ORTHO05D003883 7.6e-23 112.1 105 49.5
SEGI_04877 Sequoiadendron giganteum HOM05D000094 ORTHO05D003883 2.9e-22 110.2 108 48.1
BcaB05g24839 Brassica carinata HOM05D000094 ORTHO05D003883 8.4e-22 108.6 107 48.6
RcHm_v2.0_Chr4g0394751 Rosa chinensis HOM05D000094 ORTHO05D003883 2.4e-21 107.1 74 59.5
Eucgr.B00556 Eucalyptus grandis HOM05D000094 ORTHO05D003883 9.3e-21 105.1 101 51.5
COL.COLO4_29563 Corchorus olitorius HOM05D000094 ORTHO05D003883 1.9e-18 97.4 104 46.2
Os03g0400800 Oryza sativa ssp. japonica HOM05D000094 ORTHO05D003883 4.3e-18 96.3 106 44.3
SMO356G0197 Selaginella moellendorffii HOM05D000094 ORTHO05D003883 2.1e-17 94.0 103 42.7
Carub.0002s2113 Capsella rubella HOM05D000094 ORTHO05D003883 6.9e-16 89.0 107 44.9
Os08g0322500 Oryza sativa ssp. japonica HOM05D000094 ORTHO05D003883 1.2e-15 88.2 103 44.7
SMO169G0230 Selaginella moellendorffii HOM05D000094 ORTHO05D003883 1.4e-13 81.3 102 39.2
BcaC08g46866 Brassica carinata HOM05D000094 ORTHO05D003883 4.6e-12 76.3 67 50.7
BcaB07g32846 Brassica carinata HOM05D000094 ORTHO05D003883 2.5e-10 70.5 67 50.7
CAN.G911.3 Capsicum annuum HOM05D000094 ORTHO05D003883 8.2e-09 65.5 56 51.8
Mapoly0049s0132 Marchantia polymorpha HOM05D000094 ORTHO05D002388 8.2e-09 65.5 102 36.3
Zm00001eb134820 Zea mays HOM05D000094 ORTHO05D003883 4.5e-07 59.7 64 39.1


User provided reference genes

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