Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 1.1e-133 479.9 245 100.0
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 1.2e-87 327.0 256 70.7
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 4.2e-80 302.0 255 67.1
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 2.4e-59 233.0 261 54.0
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 1.6e-55 220.3 230 57.8
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 4.4e-37 159.1 154 59.1
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 9.2e-35 151.4 253 41.1
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 2.5e-32 143.3 254 38.6
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 5.6e-32 142.1 227 42.3
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 2.3e-30 136.7 203 42.9
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 6.8e-30 135.2 220 41.8
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 1.5e-29 134.0 249 37.3
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 1.5e-29 134.0 249 37.3
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 2.0e-29 133.7 207 41.5
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 2.6e-29 133.3 210 41.9
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 5.8e-29 132.1 214 40.7
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 1.3e-28 131.0 249 37.3
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 2.2e-28 130.2 237 37.1
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 1.9e-27 127.1 244 36.1
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 3.2e-27 126.3 217 41.0
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 5.4e-27 125.6 237 34.6
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 5.4e-27 125.6 251 36.3
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 7.1e-27 125.2 237 34.6
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 9.2e-27 124.8 187 43.3
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 9.2e-27 124.8 250 34.4
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 9.2e-27 124.8 251 37.5
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 4.6e-26 122.5 259 35.5
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 4.6e-26 122.5 198 42.4
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 1.1e-24 117.9 186 41.9
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 1.9e-24 117.1 227 36.1
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 1.9e-24 117.1 188 39.9
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 3.3e-24 116.3 246 34.6
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 3.3e-24 116.3 212 38.7
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 7.3e-24 115.2 212 36.8
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 9.5e-24 114.8 197 40.6
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 9.5e-24 114.8 175 41.1
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 1.2e-23 114.4 207 35.7
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 1.6e-23 114.0 195 39.5
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 2.1e-23 113.6 184 43.5
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 2.8e-23 113.2 224 35.3
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 4.7e-23 112.5 179 42.5
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 8.1e-23 111.7 168 42.3
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 1.1e-22 111.3 218 37.6
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 1.4e-22 110.9 226 36.7
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 1.4e-22 110.9 206 38.3
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 2.4e-22 110.2 197 38.6
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 2.4e-22 110.2 209 34.4
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 2.4e-22 110.2 205 34.6
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 5.2e-22 109.0 211 33.2
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 6.8e-22 108.6 175 42.3
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 8.9e-22 108.2 223 33.6
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 1.2e-21 107.8 187 40.1
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 2.0e-21 107.1 238 31.5
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 3.4e-21 106.3 195 35.4
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 4.4e-21 105.9 245 33.5
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 7.6e-21 105.1 231 35.5
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 9.9e-21 104.8 208 37.5
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 1.3e-20 104.4 217 37.3
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 2.9e-20 103.2 222 35.6
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 4.9e-20 102.4 207 33.3
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 1.4e-19 100.9 218 33.5
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 1.9e-19 100.5 206 36.9
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 2.4e-19 100.1 198 37.9
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 3.2e-19 99.8 152 42.1
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 4.1e-19 99.4 247 34.0
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 7.1e-19 98.6 184 38.0
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 7.1e-19 98.6 160 38.8
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 9.2e-19 98.2 241 31.5
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 9.2e-19 98.2 222 32.9
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 1.2e-18 97.8 236 32.6
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 1.6e-18 97.4 251 30.3
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 1.6e-18 97.4 199 36.7
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 1.6e-18 97.4 208 36.5
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 1.6e-18 97.4 208 36.5
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 1.6e-18 97.4 208 36.5
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 2.1e-18 97.1 214 36.4
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 2.7e-18 96.7 196 35.7
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 4.6e-18 95.9 179 36.3
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 1.0e-17 94.7 208 35.6
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 1.0e-17 94.7 243 33.7
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 2.3e-17 93.6 172 39.5
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 2.3e-17 93.6 204 35.8
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 5.1e-17 92.4 199 36.2
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 1.1e-16 91.3 179 36.9
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 1.5e-16 90.9 206 33.0
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 1.9e-16 90.5 120 43.3
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 3.3e-16 89.7 213 32.9
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 5.6e-16 89.0 208 32.7
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 5.6e-16 89.0 193 35.2
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 7.3e-16 88.6 95 50.5
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 1.6e-15 87.4 179 36.3
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 2.1e-15 87.0 205 32.2
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 3.6e-15 86.3 208 32.2
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 1.1e-14 84.7 196 32.1
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 2.4e-14 83.6 174 33.3
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 2.4e-14 83.6 197 34.0
Os03g0741100 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D009261 6.9e-14 82.0 157 32.5
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 9.9e-13 78.2 175 30.3
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 1.7e-12 77.4 215 32.6
HPP92_027840 Vanilla planifolia HOM05D007216 ORTHO05D009261 2.3e-09 67.0 262 29.4
Aqoxy5G00327 Aquilegia oxysepala HOM05D007216 ORTHO05D009261 2.1e-07 60.5 103 38.8
Dinv44631 Davidia involucrata HOM05D007216 ORTHO05D009261 2.1e-07 60.5 108 36.1
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.8e-06 57.4 177 29.9
Nitab4.5_0000525g0160 Nicotiana tabacum HOM05D007216 ORTHO05D009261 5.3e-06 55.8 210 29.5
HPP92_023468 Vanilla planifolia HOM05D007216 ORTHO05D009261 6.9e-06 55.5 140 31.4
Peaxi162Scf00028g00036 Petunia axillaris HOM05D004059 ORTHO05D004591 9.0e-06 55.1 163 28.8
vmacro17254 Vaccinium macrocarpon HOM05D004059 ORTHO05D004591 9.0e-06 55.1 130 32.3


User provided reference genes

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