Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21790 Trifolium pratense HOM05D003986 ORTHO05D411817 4.8e-115 417.9 225 100.0
Glyma.05G241400 Glycine max HOM05D003986 ORTHO05D004916 5.0e-11 72.4 50 76.0
Sed0014719 Sechium edule HOM05D003986 ORTHO05D004916 7.2e-10 68.6 50 70.0
Sabra19G0063600 Salix brachista HOM05D003986 ORTHO05D004916 4.7e-09 65.9 51 70.6
CSS0009129 Camellia sinensis var. sinensis HOM05D003986 ORTHO05D004916 1.0e-08 64.7 51 68.6
CSS0026713 Camellia sinensis var. sinensis HOM05D003986 ORTHO05D004916 1.0e-08 64.7 51 68.6
Actinidia12415 Actinidia chinensis HOM05D003986 ORTHO05D004916 1.8e-08 63.9 51 68.6
Eucgr.B02697 Eucalyptus grandis HOM05D003986 ORTHO05D004916 1.8e-08 63.9 50 62.0
Potri.013G085000 Populus trichocarpa HOM05D003986 ORTHO05D004916 3.0e-08 63.2 51 68.6
MSTRG.2114 Avicennia marina HOM05D003986 ORTHO05D004916 2.0e-07 60.5 51 66.7
CAN.G206.116 Capsicum annuum HOM05D003986 ORTHO05D004916 2.0e-07 60.5 51 66.7
PSO063G2585 Papaver somniferum HOM05D003986 ORTHO05D004916 3.3e-07 59.7 48 66.7
PSO782G5475 Papaver somniferum HOM05D003986 ORTHO05D004916 3.3e-07 59.7 48 66.7
Peaxi162Scf00937g00119 Petunia axillaris HOM05D003986 ORTHO05D004916 3.3e-07 59.7 51 64.7
Lj3C862T8 Lonicera japonica HOM05D003986 ORTHO05D004916 1.7e-06 57.4 50 60.0
Sc14g0006590 Simmondsia chinensis HOM05D003986 ORTHO05D004916 2.2e-06 57.0 51 66.7
PGR142G4089 Punica granatum HOM05D003986 ORTHO05D004916 3.7e-06 56.2 48 62.5
Medtr7g117220 Medicago truncatula HOM05D003986 ORTHO05D004916 6.3e-06 55.5 31 93.5


User provided reference genes

Program Settings