Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G21742 Trifolium pratense HOM05D006280 ORTHO05D007876 2.1e-264 915.2 489 100.0
Psat4g148560 Pisum sativum HOM05D006280 ORTHO05D007876 3.1e-215 751.9 545 73.8
Ca_23874_v3 Cicer arietinum L. HOM05D006280 ORTHO05D007876 8.4e-205 717.2 493 78.3
Medtr8g036940 Medicago truncatula HOM05D006280 ORTHO05D007876 1.4e-188 663.3 494 76.1
Lj3g0014839 Lotus japonicus HOM05D006280 ORTHO05D007876 9.4e-148 527.7 554 56.7
Glyma.12G238500 Glycine max HOM05D006280 ORTHO05D007876 6.3e-144 515.0 506 59.5
Lalb_Chr03g0033951 Lupinus albus HOM05D006280 ORTHO05D007876 7.0e-135 485.0 511 58.1
Phvul.011G212200 Phaseolus vulgaris HOM05D006280 ORTHO05D007876 1.2e-134 484.2 474 59.5
VMungo1127G1733 Vigna mungo HOM05D006280 ORTHO05D007876 2.9e-133 479.6 492 56.7
arahy.Tifrunner.gnm1.ann1.JHR7K6 Arachis hypogaea HOM05D006280 ORTHO05D007876 8.3e-112 408.3 555 47.6
arahy.Tifrunner.gnm1.ann1.0Y513H Arachis hypogaea HOM05D006280 ORTHO05D007876 1.9e-100 370.5 512 46.9
Glyma.13G204200 Glycine max HOM05D006280 ORTHO05D007876 2.3e-85 320.5 239 71.5
Prupe.2G009900 Prunus persica HOM05D006280 ORTHO05D007876 5.5e-79 299.3 635 37.0
MD02G1315100 Malus domestica HOM05D006280 ORTHO05D007876 3.0e-77 293.5 632 36.2
GSVIVG01032060001 Vitis vinifera HOM05D006280 ORTHO05D007876 2.8e-75 287.0 557 36.8
CANSAT01G2414 Cannabis sativa HOM05D006280 ORTHO05D007876 4.5e-73 279.6 555 39.1
Gohir.D11G166400 Gossypium hirsutum HOM05D006280 ORTHO05D007876 4.5e-73 279.6 673 34.0
Gorai.007G177400 Gossypium raimondii HOM05D006280 ORTHO05D007876 4.5e-73 279.6 673 34.0
Manes.10G146200 Manihot esculenta HOM05D006280 ORTHO05D007876 1.3e-72 278.1 655 34.5
Eucgr.J01260 Eucalyptus grandis HOM05D006280 ORTHO05D007876 6.5e-72 275.8 552 37.5
Gohir.A11G160200 Gossypium hirsutum HOM05D006280 ORTHO05D007876 1.4e-71 274.6 673 33.9
MBI01_g40597_MAGBIO Magnolia biondii HOM05D006280 ORTHO05D007876 2.5e-71 273.9 505 37.8
Sabra09G0047500 Salix brachista HOM05D006280 ORTHO05D007876 4.2e-71 273.1 588 36.2
Potri.001G269700 Populus trichocarpa HOM05D006280 ORTHO05D007876 5.5e-71 272.7 641 35.4
Haze_03235 Corylus avellana HOM05D006280 ORTHO05D007876 3.5e-70 270.0 469 37.7
FAN03G0134 Fragaria x ananassa HOM05D006280 ORTHO05D007876 7.9e-70 268.9 462 38.7
Cpa.g.sc234.10 Carica papaya HOM05D006280 ORTHO05D007876 1.3e-69 268.1 634 34.4
Thecc.01G413600 Theobroma cacao HOM05D006280 ORTHO05D007876 5.1e-69 266.2 412 42.5
QL04p005292 Quercus lobata HOM05D006280 ORTHO05D007876 2.5e-68 263.8 424 40.6
Actinidia20679 Actinidia chinensis HOM05D006280 ORTHO05D007876 7.4e-68 262.3 479 38.4
FvH4_7g00721 Fragaria vesca HOM05D006280 ORTHO05D007876 7.4e-68 262.3 451 38.8
FAN06G1370 Fragaria x ananassa HOM05D006280 ORTHO05D007876 1.6e-67 261.2 451 38.6
FAN01G3121 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.8e-67 260.4 336 46.1
FAN10G1835 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.8e-67 260.4 451 38.6
Lj9A629T105 Lonicera japonica HOM05D006280 ORTHO05D007876 2.8e-67 260.4 624 34.3
MD07G1006900 Malus domestica HOM05D006280 ORTHO05D007876 2.8e-67 260.4 467 39.4
TWI09G0861 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 4.8e-67 259.6 678 33.0
Oeu039119.3 Olea europaea HOM05D006280 ORTHO05D007876 1.8e-66 257.7 339 44.8
MELO3C023535.2 Cucumis melo HOM05D006280 ORTHO05D007876 4.1e-66 256.5 672 32.7
PSO447G0216 Papaver somniferum HOM05D006280 ORTHO05D007876 5.3e-66 256.1 531 35.6
Hma1.2p1_0280F.1_g112910 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 9.0e-66 255.4 660 34.1
CAN.G170.124 Capsicum annuum HOM05D006280 ORTHO05D007876 1.5e-65 254.6 423 39.5
Nitab4.5_0003361g0010 Nicotiana tabacum HOM05D006280 ORTHO05D007876 1.5e-65 254.6 420 39.5
FAN01G1556 Fragaria x ananassa HOM05D006280 ORTHO05D007876 2.6e-65 253.8 420 40.5
CSS0048133 Camellia sinensis var. sinensis HOM05D006280 ORTHO05D007876 3.4e-65 253.4 675 32.4
CiPaw.13G003200 Carya illinoinensis HOM05D006280 ORTHO05D007876 1.7e-64 251.1 663 32.7
Sed0005202 Sechium edule HOM05D006280 ORTHO05D007876 2.9e-64 250.4 685 30.2
Peaxi162Scf00428g00816 Petunia axillaris HOM05D006280 ORTHO05D007876 5.0e-64 249.6 414 39.6
Duzib268G1473 Durio zibethinus HOM05D006280 ORTHO05D007876 6.5e-64 249.2 675 32.3
ClCG09G004310 Citrullus lanatus HOM05D006280 ORTHO05D007876 1.1e-63 248.4 701 31.1
Aqoxy2G00116 Aquilegia oxysepala HOM05D006280 ORTHO05D007876 3.2e-63 246.9 526 34.8
TWI73G0538 Tripterygium wilfordii HOM05D006280 ORTHO05D007876 5.5e-63 246.1 666 32.6
RcHm_v2.0_Chr1g0314941 Rosa chinensis HOM05D006280 ORTHO05D007876 7.2e-63 245.7 558 34.4
Sc14g0005130 Simmondsia chinensis HOM05D006280 ORTHO05D007876 9.3e-63 245.4 634 33.1
PGSC0003DMG400006815 Solanum tuberosum HOM05D006280 ORTHO05D007876 2.1e-62 244.2 424 38.7
Hund03633 Selenicereus undatus HOM05D006280 ORTHO05D007876 1.3e-61 241.5 649 32.5
Dinv09375 Davidia involucrata HOM05D006280 ORTHO05D007876 2.3e-61 240.7 330 43.3
PGR044G1516 Punica granatum HOM05D006280 ORTHO05D007876 3.0e-61 240.4 579 34.4
Nitab4.5_0001542g0030 Nicotiana tabacum HOM05D006280 ORTHO05D007876 2.5e-60 237.3 421 38.7
Solyc01g086930.4 Solanum lycopersicum HOM05D006280 ORTHO05D007876 7.4e-60 235.7 422 38.4
CsaV3_7G031230 Cucumis sativus L. HOM05D006280 ORTHO05D007876 9.7e-60 235.3 432 39.1
Hma1.2p1_0845F.1_g227480 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 9.7e-60 235.3 442 38.7
Sopen01g033930 Solanum pennellii HOM05D006280 ORTHO05D007876 9.7e-60 235.3 422 38.4
Carub.0005s1845 Capsella rubella HOM05D006280 ORTHO05D007876 3.7e-59 233.4 607 31.8
HanXRQChr16g0519571 Helianthus annuus HOM05D006280 ORTHO05D007876 3.7e-59 233.4 421 39.9
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 6.9e-58 229.2 542 34.3
AL5G32680 Arabidopsis lyrata HOM05D006280 ORTHO05D007876 4.5e-57 226.5 601 32.1
AT3G52115 Arabidopsis thaliana HOM05D006280 ORTHO05D007876 7.7e-57 225.7 599 31.9
ECA234G4003 Erigeron canadensis HOM05D006280 ORTHO05D007876 2.2e-56 224.2 593 32.9
AUR62005634 Chenopodium quinoa HOM05D006280 ORTHO05D007876 2.9e-56 223.8 430 37.0
PSO210G6454 Papaver somniferum HOM05D006280 ORTHO05D007876 2.9e-56 223.8 336 42.3
MSTRG.20601 Avicennia marina HOM05D006280 ORTHO05D007876 3.8e-56 223.4 417 37.6
Thhalv10010216m.g Eutrema salsugineum HOM05D006280 ORTHO05D007876 2.5e-55 220.7 631 30.7
Ciclev10030953m.g Citrus clementina HOM05D006280 ORTHO05D007876 4.2e-55 219.9 643 31.6
Sp5g10170 Schrenkiella parvula HOM05D006280 ORTHO05D007876 4.2e-55 219.9 633 30.2
Migut.B01331 Erythranthe guttata HOM05D006280 ORTHO05D007876 1.6e-54 218.0 442 35.7
Cc02_g27560 Coffea canephora HOM05D006280 ORTHO05D007876 2.7e-54 217.2 416 38.2
Sed0013445 Sechium edule HOM05D006280 ORTHO05D007876 2.7e-54 217.2 614 31.3
Lsat_1_v5_gn_4_46080 Lactuca sativa HOM05D006280 ORTHO05D007876 1.0e-53 215.3 448 35.7
BcaB02g08586 Brassica carinata HOM05D006280 ORTHO05D007876 1.4e-53 214.9 596 31.5
AUR62028915 Chenopodium quinoa HOM05D006280 ORTHO05D007876 3.0e-53 213.8 621 31.7
CARHR161840 Cardamine hirsuta HOM05D006280 ORTHO05D007876 4.4e-52 209.9 626 28.8
SGA_v2.0_scaffold167G38459 Striga asiatica HOM05D006280 ORTHO05D007876 1.3e-51 208.4 422 36.0
SalBow7G2237 Salvia bowleyana HOM05D006280 ORTHO05D007876 3.7e-51 206.8 340 39.4
TAR636G0096 Trochodendron aralioides HOM05D006280 ORTHO05D007876 4.8e-51 206.5 248 45.2
Rhsim01G0130700 Rhododendron simsii HOM05D006280 ORTHO05D007876 8.2e-51 205.7 208 52.9
THA.LOC104817627 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 8.2e-51 205.7 641 30.6
Aa31LG10G7200 Aethionema arabicum HOM05D006280 ORTHO05D007876 1.1e-50 205.3 618 31.6
Zm00001eb388310 Zea mays HOM05D006280 ORTHO05D007876 1.4e-50 204.9 549 33.5
A04p07250 Brassica napus HOM05D006280 ORTHO05D007876 1.2e-49 201.8 607 31.3
BraA04t16420Z Brassica rapa HOM05D006280 ORTHO05D007876 2.6e-49 200.7 607 31.1
THA.LOC104802360 Tarenaya hassleriana HOM05D006280 ORTHO05D007876 2.6e-49 200.7 422 36.0
BcaC02g09279 Brassica carinata HOM05D006280 ORTHO05D007876 4.5e-49 199.9 608 31.1
C04p40810 Brassica napus HOM05D006280 ORTHO05D007876 4.5e-49 199.9 608 31.1
BolC4t25665H Brassica oleracea HOM05D006280 ORTHO05D007876 4.5e-49 199.9 608 31.1
SGA_v2.0_scaffold119G32715 Striga asiatica HOM05D006280 ORTHO05D007876 4.5e-49 199.9 678 28.8
EL10Ac6g13519 Beta vulgaris HOM05D006280 ORTHO05D007876 1.3e-48 198.4 703 29.6
Os06g0613400 Oryza sativa ssp. japonica HOM05D006280 ORTHO05D007876 5.5e-47 193.0 584 32.0
Potri.009G064200 Populus trichocarpa HOM05D006280 ORTHO05D007876 2.1e-46 191.0 604 31.1
CDE04G2764 Ceratophyllum demersum HOM05D006280 ORTHO05D007876 8.8e-45 185.7 193 50.3
ATR0824G264 Amborella trichopoda HOM05D006280 ORTHO05D007876 1.5e-39 168.3 635 28.3
Dinv14268 Davidia involucrata HOM05D006280 ORTHO05D007876 8.8e-37 159.1 121 59.5
Hma1.2p1_0312F.1_g121350 Hydrangea macrophylla HOM05D006280 ORTHO05D007876 7.5e-36 156.0 194 46.4
vmacro21179 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 7.0e-34 149.4 120 57.5
Nn2g15492 Nelumbo nucifera HOM05D006280 ORTHO05D007876 7.2e-31 139.4 700 25.9
SEGI_32119 Sequoiadendron giganteum HOM05D006280 ORTHO05D007876 1.4e-26 125.2 626 26.2
unitig_8.g3859 Utricularia gibba HOM05D006280 ORTHO05D007876 1.8e-26 124.8 445 28.8
QL04p005267 Quercus lobata HOM05D006280 ORTHO05D007876 7.0e-26 122.9 346 32.4
AagrBONN_evm.TU.Sc2ySwM_117.1753 Anthoceros agrestis HOM05D006280 ORTHO05D007876 1.6e-22 111.7 80 61.2
Mapoly0001s0083 Marchantia polymorpha HOM05D006280 ORTHO05D007876 2.8e-22 110.9 99 50.5
SMO196G0201 Selaginella moellendorffii HOM05D006280 ORTHO05D007876 2.8e-22 110.9 192 37.0
Pp3c16_2140 Physcomitrium patens HOM05D006280 ORTHO05D007876 1.7e-19 101.7 124 43.5
MCO05G132 Micromonas commoda HOM05D006280 ORTHO05D007876 1.2e-09 68.9 86 38.4
TAR636G3118 Trochodendron aralioides HOM05D006280 ORTHO05D007876 2.7e-09 67.8 142 37.3
Rhsim01G0130600 Rhododendron simsii HOM05D006280 ORTHO05D007876 3.0e-08 64.3 193 35.8
Dinv09374 Davidia involucrata HOM05D006280 ORTHO05D007876 5.0e-08 63.5 189 32.3
unitig_8.g3860 Utricularia gibba HOM05D006280 ORTHO05D007876 4.3e-07 60.5 155 38.7
PSO210G6643 Papaver somniferum HOM05D006280 ORTHO05D007876 5.6e-07 60.1 158 31.0
vmacro21180 Vaccinium macrocarpon HOM05D006280 ORTHO05D007876 9.5e-07 59.3 193 34.2


User provided reference genes

Program Settings