Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20987 Trifolium pratense HOM05D000014 ORTHO05D000016 1.1e-77 293.1 139 100.0
TPR.G27569 Trifolium pratense HOM05D000014 ORTHO05D000016 2.7e-55 218.8 131 84.7
TPR.G20931 Trifolium pratense HOM05D000014 ORTHO05D000016 1.4e-48 196.4 122 82.8
TPR.G27441 Trifolium pratense HOM05D000014 ORTHO05D000016 3.6e-28 128.6 72 80.6
TPR.G29200 Trifolium pratense HOM05D000014 ORTHO05D000016 1.1e-27 127.1 72 79.2
Ca_06635_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.8e-27 126.3 132 53.0
TPR.G30974 Trifolium pratense HOM05D000014 ORTHO05D000016 8.9e-27 124.0 82 73.2
Ca_19616_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.6e-26 122.5 118 58.5
Ca_03652_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 4.9e-25 118.2 118 55.1
TPR.G23123 Trifolium pratense HOM05D000014 ORTHO05D000016 6.0e-23 111.3 57 84.2
Ca_05333_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 5.1e-22 108.2 71 70.4
Ca_03019_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 6.6e-22 107.8 71 70.4
Ca_03809_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 8.6e-22 107.5 71 70.4
Ca_19963_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 2.5e-21 105.9 71 70.4
TPR.G24565 Trifolium pratense HOM05D000014 ORTHO05D000016 5.6e-21 104.8 60 78.3
TPR.G35810 Trifolium pratense HOM05D000014 ORTHO05D000016 5.6e-21 104.8 69 82.6
Ca_23138_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 7.3e-21 104.4 71 70.4
Ca_13638_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 9.6e-21 104.0 68 72.1
Ca_26650_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 9.6e-21 104.0 71 69.0
PGR031G2305 Punica granatum HOM05D000014 ORTHO05D000093 4.7e-20 101.7 121 46.3
PGR042G0019 Punica granatum HOM05D000014 ORTHO05D000093 4.7e-20 101.7 121 46.3
PGR042G2040 Punica granatum HOM05D000014 ORTHO05D000093 4.7e-20 101.7 121 46.3
PGR119G1452 Punica granatum HOM05D000014 ORTHO05D000093 4.7e-20 101.7 121 46.3
PGR119G1528 Punica granatum HOM05D000014 ORTHO05D000093 4.7e-20 101.7 121 46.3
PGR102G1458 Punica granatum HOM05D000761 ORTHO05D000016 2.4e-19 99.4 123 45.5
Ca_09584_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.1e-19 99.0 59 76.3
PGR119G1189 Punica granatum HOM05D000014 ORTHO05D000093 4.0e-19 98.6 121 45.5
Ca_03067_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 5.2e-19 98.2 71 64.8
Ca_27944_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 5.2e-19 98.2 64 71.9
Ca_05093_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 6.8e-19 97.8 95 56.8
Ca_23063_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.5e-18 96.7 71 63.4
Ca_19712_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 2.0e-18 96.3 71 66.2
Ca_19559_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.4e-18 95.5 64 68.8
Ca_23501_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 4.4e-18 95.1 65 69.2
TWI23G1233 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 4.4e-18 95.1 130 46.2
VMungo0720G1022 Vigna mungo HOM05D000014 ORTHO05D000016 4.4e-18 95.1 134 43.3
Ca_26849_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 7.6e-18 94.4 71 63.4
VMungo1127G0663 Vigna mungo HOM05D000014 ORTHO05D000016 9.9e-18 94.0 142 43.0
TWI18G1427 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 1.9e-16 89.7 71 60.6
Ca_22931_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.4e-16 89.4 56 71.4
Manes.12G095501 Manihot esculenta HOM05D000014 ORTHO05D000016 1.2e-15 87.0 149 38.3
Manes.06G029160 Manihot esculenta HOM05D000014 ORTHO05D000016 1.6e-15 86.7 149 38.3
Oeu046423.1 Olea europaea HOM05D000014 ORTHO05D000016 2.7e-15 85.9 74 58.1
VMungo0251G1094 Vigna mungo HOM05D000004 ORTHO05D000016 3.5e-15 85.5 62 59.7
Manes.08G076205 Manihot esculenta HOM05D000014 ORTHO05D000016 1.3e-14 83.6 155 38.7
Manes.02G026950 Manihot esculenta HOM05D000014 ORTHO05D000016 1.7e-14 83.2 73 52.1
Manes.02G221020 Manihot esculenta HOM05D000014 ORTHO05D000016 1.7e-14 83.2 149 39.6
Manes.08G086511 Manihot esculenta HOM05D000014 ORTHO05D000016 3.0e-14 82.4 149 37.6
Manes.07G008991 Manihot esculenta HOM05D000014 ORTHO05D000016 3.9e-14 82.0 69 56.5
Cpa.g.c44326 Carica papaya HOM05D000014 ORTHO05D000016 1.1e-13 80.5 119 40.3
Cpa.g.sc38.92 Carica papaya HOM05D000014 ORTHO05D000016 1.9e-13 79.7 73 56.2
CSS0037580 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 5.6e-13 78.2 98 45.9
TPR.G21512 Trifolium pratense HOM05D000014 ORTHO05D000016 7.3e-13 77.8 42 83.3
Oeu014083.1 Olea europaea HOM05D000014 ORTHO05D000016 9.6e-13 77.4 74 52.7
SGA_v2.0_scaffold162G37885 Striga asiatica HOM05D000014 ORTHO05D000016 1.3e-12 77.0 80 53.8
Manes.05G137052 Manihot esculenta HOM05D000014 ORTHO05D000016 2.1e-12 76.3 149 34.9
Oeu019854.1 Olea europaea HOM05D000014 ORTHO05D000016 2.1e-12 76.3 69 58.0
Oeu038457.1 Olea europaea HOM05D000014 ORTHO05D000016 6.2e-12 74.7 74 51.4
HanXRQChr05g0135921 Helianthus annuus HOM05D000014 ORTHO05D000016 8.1e-12 74.3 63 63.5
Manes.04G051445 Manihot esculenta HOM05D000014 ORTHO05D000016 1.4e-11 73.6 149 36.9
Manes.04G064966 Manihot esculenta HOM05D000014 ORTHO05D000016 1.8e-11 73.2 149 33.6
Manes.17G023144 Manihot esculenta HOM05D000014 ORTHO05D000016 1.8e-11 73.2 66 45.5
Cpa.g.c35553 Carica papaya HOM05D000014 ORTHO05D000016 1.5e-10 70.1 63 57.1
arahy.Tifrunner.gnm1.ann1.9BJ40N Arachis hypogaea HOM05D015831 ORTHO05D000016 5.8e-10 68.2 82 46.3
Hund08079 Selenicereus undatus HOM05D000185 ORTHO05D000105 5.8e-10 68.2 66 42.4
Ah.05g176490 Amaranthus hybridus HOM05D000014 ORTHO05D000016 2.9e-09 65.9 111 40.5
AUR62024032 Chenopodium quinoa HOM05D008689 ORTHO05D000016 2.9e-09 65.9 77 41.6
arahy.Tifrunner.gnm1.ann1.I6GK3F Arachis hypogaea HOM05D000014 ORTHO05D000016 1.1e-08 63.9 60 50.0
Cpa.g.c31069.1 Carica papaya HOM05D000014 ORTHO05D000016 1.1e-08 63.9 57 52.6
AUR62029875 Chenopodium quinoa HOM05D000014 ORTHO05D000016 1.1e-08 63.9 69 40.6
PSO339G5834 Papaver somniferum HOM05D000014 ORTHO05D000016 1.1e-08 63.9 66 47.0
Ah.09g227080 Amaranthus hybridus HOM05D000014 ORTHO05D000016 1.9e-08 63.2 65 47.7
arahy.Tifrunner.gnm1.ann1.6USR74 Arachis hypogaea HOM05D012201 ORTHO05D000016 1.9e-08 63.2 63 49.2
PSO447G0129 Papaver somniferum HOM05D000014 ORTHO05D000016 3.2e-08 62.4 55 49.1
FvH4_6g18062 Fragaria vesca HOM05D000014 ORTHO05D000093 4.2e-08 62.0 69 39.1
FvH4_6g22851 Fragaria vesca HOM05D000014 ORTHO05D000016 4.2e-08 62.0 69 39.1
FvH4_6g22852 Fragaria vesca HOM05D000014 ORTHO05D000016 4.2e-08 62.0 69 40.6
Ah.05g175580 Amaranthus hybridus HOM05D000014 ORTHO05D000016 7.1e-08 61.2 66 48.5
PSO170G2292 Papaver somniferum HOM05D000014 ORTHO05D000016 1.2e-07 60.5 66 47.0
PSO339G1122 Papaver somniferum HOM05D000014 ORTHO05D000016 1.2e-07 60.5 55 47.3
arahy.Tifrunner.gnm1.ann1.G72FAL Arachis hypogaea HOM05D000014 ORTHO05D000016 1.6e-07 60.1 63 46.0
arahy.Tifrunner.gnm1.ann1.Q82GCC Arachis hypogaea HOM05D000014 ORTHO05D000016 1.6e-07 60.1 142 31.0
AUR62025769 Chenopodium quinoa HOM05D008689 ORTHO05D000016 1.6e-07 60.1 66 43.9
FvH4_4g14403 Fragaria vesca HOM05D000014 ORTHO05D000016 1.6e-07 60.1 69 39.1
PSO170G5595 Papaver somniferum HOM05D000014 ORTHO05D000016 2.1e-07 59.7 57 50.9
MD15G1306600 Malus domestica HOM05D000014 ORTHO05D000016 2.7e-07 59.3 79 43.0
arahy.Tifrunner.gnm1.ann1.76X1LQ Arachis hypogaea HOM05D000014 ORTHO05D000016 3.5e-07 58.9 133 32.3
PSO832G2079 Papaver somniferum HOM05D000014 ORTHO05D000016 3.5e-07 58.9 54 48.1
PSO210G1966 Papaver somniferum HOM05D000014 ORTHO05D000016 4.6e-07 58.5 55 47.3
arahy.Tifrunner.gnm1.ann1.B4VQWD Arachis hypogaea HOM05D012201 ORTHO05D000016 6.0e-07 58.2 53 47.2
arahy.Tifrunner.gnm1.ann1.DU2Q8J Arachis hypogaea HOM05D012201 ORTHO05D000016 6.0e-07 58.2 63 47.6
FvH4_3g26316 Fragaria vesca HOM05D000014 ORTHO05D000016 6.0e-07 58.2 70 40.0
PSO017G4594 Papaver somniferum HOM05D000014 ORTHO05D000016 6.0e-07 58.2 55 47.3
PSO017G7079 Papaver somniferum HOM05D000014 ORTHO05D000016 6.0e-07 58.2 67 41.8
PSO782G3239 Papaver somniferum HOM05D000014 ORTHO05D000016 6.0e-07 58.2 55 47.3
arahy.Tifrunner.gnm1.ann1.94KXRC Arachis hypogaea HOM05D012201 ORTHO05D000016 7.9e-07 57.8 58 46.6
PSO764G0254 Papaver somniferum HOM05D000014 ORTHO05D000016 7.9e-07 57.8 57 49.1
Ca_11645_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 1.0e-06 57.4 124 35.5
MD10G1200800 Malus domestica HOM05D000014 ORTHO05D000016 1.3e-06 57.0 79 41.8
PSO017G2550 Papaver somniferum HOM05D000014 ORTHO05D000016 1.3e-06 57.0 57 49.1
PSO782G2329 Papaver somniferum HOM05D000014 ORTHO05D000016 1.3e-06 57.0 67 40.3
PSO384G4105 Papaver somniferum HOM05D000014 ORTHO05D000016 1.7e-06 56.6 55 45.5
PSO063G6299 Papaver somniferum HOM05D000014 ORTHO05D000016 2.3e-06 56.2 67 41.8
PSO541G0146 Papaver somniferum HOM05D000014 ORTHO05D000016 2.3e-06 56.2 55 47.3
PSO832G2008 Papaver somniferum HOM05D000014 ORTHO05D000016 2.3e-06 56.2 53 45.3
arahy.Tifrunner.gnm1.ann1.BHV928 Arachis hypogaea HOM05D012201 ORTHO05D000016 3.0e-06 55.8 57 47.4
PSO170G1623 Papaver somniferum HOM05D000014 ORTHO05D000016 3.0e-06 55.8 98 33.7
PSO339G0240 Papaver somniferum HOM05D000014 ORTHO05D000016 3.0e-06 55.8 55 45.5
PSO384G1063 Papaver somniferum HOM05D000014 ORTHO05D000016 3.0e-06 55.8 95 34.7
PSO063G4722 Papaver somniferum HOM05D000014 ORTHO05D000016 3.9e-06 55.5 67 38.8
arahy.Tifrunner.gnm1.ann1.KGL3I5 Arachis hypogaea HOM05D000014 ORTHO05D000016 5.1e-06 55.1 76 38.2
PSO832G2045 Papaver somniferum HOM05D000014 ORTHO05D000016 8.7e-06 54.3 95 34.7


User provided reference genes

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