Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G20214 Trifolium pratense HOM05D001415 ORTHO05D001075 6.6e-28 126.7 67 100.0
Medtr1g063830 Medicago truncatula HOM05D001415 ORTHO05D001075 1.2e-13 79.3 63 60.3
Lj1g0014030 Lotus japonicus HOM05D001415 ORTHO05D001075 2.3e-12 75.1 58 58.6
VMungo0720G3116 Vigna mungo HOM05D001415 ORTHO05D001075 1.1e-11 72.8 60 60.0
Glyma.13G143700 Glycine max HOM05D001415 ORTHO05D001075 1.5e-11 72.4 58 60.3
Lalb_Chr01g0018721 Lupinus albus HOM05D001415 ORTHO05D001075 1.5e-11 72.4 56 60.7
Lalb_Chr20g0112631 Lupinus albus HOM05D001415 ORTHO05D001075 1.9e-11 72.0 55 61.8
Glyma.10G057200 Glycine max HOM05D001415 ORTHO05D001075 3.3e-11 71.2 58 56.9
Glyma.03G182700 Glycine max HOM05D001415 ORTHO05D001075 2.1e-10 68.6 35 80.0
RcHm_v2.0_Chr3g0470051 Rosa chinensis HOM05D001415 ORTHO05D001075 2.1e-10 68.6 49 59.2
FAN05G3971 Fragaria x ananassa HOM05D001415 ORTHO05D001075 2.8e-10 68.2 49 59.2
FAN14G2263 Fragaria x ananassa HOM05D001415 ORTHO05D001075 2.8e-10 68.2 49 59.2
Manes.08G009400 Manihot esculenta HOM05D001415 ORTHO05D001075 2.8e-10 68.2 42 71.4
Glyma.19G183200 Glycine max HOM05D001415 ORTHO05D001075 3.7e-10 67.8 59 55.9
Lalb_Chr25g0289021 Lupinus albus HOM05D001415 ORTHO05D001075 3.7e-10 67.8 35 80.0
Phvul.001G178700 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 3.7e-10 67.8 35 80.0
Manes.09G067380 Manihot esculenta HOM05D001415 ORTHO05D001075 1.8e-09 65.5 50 54.0
Aa31LG5G22210 Aethionema arabicum HOM05D001415 ORTHO05D001075 2.4e-09 65.1 35 74.3
AL4G33230 Arabidopsis lyrata HOM05D001415 ORTHO05D001075 2.4e-09 65.1 35 74.3
Gohir.A10G203600 Gossypium hirsutum HOM05D001415 ORTHO05D001075 2.4e-09 65.1 51 52.9
Gohir.D10G211700 Gossypium hirsutum HOM05D001415 ORTHO05D001075 2.4e-09 65.1 51 52.9
Gorai.011G237600 Gossypium raimondii HOM05D001415 ORTHO05D001075 2.4e-09 65.1 51 52.9
Medtr7g101850 Medicago truncatula HOM05D001415 ORTHO05D001075 2.4e-09 65.1 56 58.9
Potri.006G125600 Populus trichocarpa HOM05D001415 ORTHO05D001075 2.4e-09 65.1 35 74.3
GSVIVG01025722001 Vitis vinifera HOM05D001415 ORTHO05D001075 2.4e-09 65.1 52 57.7
AT2G36985 Arabidopsis thaliana HOM05D001415 ORTHO05D001075 3.1e-09 64.7 40 67.5
Manes.10G049900 Manihot esculenta HOM05D001415 ORTHO05D001075 4.0e-09 64.3 41 68.3
TPR.G9363 Trifolium pratense HOM05D001415 ORTHO05D001075 4.0e-09 64.3 35 77.1
CiPaw.10G130800 Carya illinoinensis HOM05D001415 ORTHO05D001075 5.3e-09 63.9 53 56.6
COL.COLO4_26977 Corchorus olitorius HOM05D001415 ORTHO05D001075 5.3e-09 63.9 50 56.0
MD01G1103800 Malus domestica HOM05D001415 ORTHO05D001075 5.3e-09 63.9 37 64.9
Psat3g042400 Pisum sativum HOM05D001415 ORTHO05D001075 6.9e-09 63.5 54 57.4
BcaB02g09311 Brassica carinata HOM05D001415 ORTHO05D001075 1.2e-08 62.8 40 65.0
Carub.0004s1883 Capsella rubella HOM05D001415 ORTHO05D001075 1.2e-08 62.8 35 71.4
Gohir.D09G143600 Gossypium hirsutum HOM05D001415 ORTHO05D001075 1.5e-08 62.4 35 71.4
Gorai.006G164900 Gossypium raimondii HOM05D001415 ORTHO05D001075 1.5e-08 62.4 35 71.4
Duzib128G1683 Durio zibethinus HOM05D001415 ORTHO05D001075 2.0e-08 62.0 50 52.0
Gohir.A05G293900 Gossypium hirsutum HOM05D001415 ORTHO05D001075 2.0e-08 62.0 36 61.1
Gohir.D05G294600 Gossypium hirsutum HOM05D001415 ORTHO05D001075 2.0e-08 62.0 36 61.1
A05p08830 Brassica napus HOM05D001415 ORTHO05D001075 2.6e-08 61.6 40 65.0
BraA05t19850Z Brassica rapa HOM05D001415 ORTHO05D001075 2.6e-08 61.6 40 65.0
CANSAT56G2970 Cannabis sativa HOM05D001415 ORTHO05D001075 2.6e-08 61.6 37 64.9
CANSAT80G1980 Cannabis sativa HOM05D001415 ORTHO05D001075 2.6e-08 61.6 56 51.8
COL.COLO4_17147 Corchorus olitorius HOM05D001415 ORTHO05D001075 2.6e-08 61.6 35 62.9
Thecc.10G082100 Theobroma cacao HOM05D001415 ORTHO05D001075 2.6e-08 61.6 35 62.9
BcaB01g03804 Brassica carinata HOM05D001415 ORTHO05D001075 4.5e-08 60.8 35 68.6
Gorai.009G311300 Gossypium raimondii HOM05D001415 ORTHO05D001075 4.5e-08 60.8 51 49.0
MD07G1170600 Malus domestica HOM05D001415 ORTHO05D001075 4.5e-08 60.8 49 49.0
Nn2g13768 Nelumbo nucifera HOM05D001415 ORTHO05D001075 4.5e-08 60.8 47 51.1
BcaB06g28964 Brassica carinata HOM05D001415 ORTHO05D001075 5.8e-08 60.5 40 62.5
BcaC01g05622 Brassica carinata HOM05D001415 ORTHO05D001075 5.8e-08 60.5 40 62.5
A03p20360 Brassica napus HOM05D001415 ORTHO05D001075 5.8e-08 60.5 40 62.5
C03p23940 Brassica napus HOM05D001415 ORTHO05D001075 5.8e-08 60.5 40 62.5
BraA03t11281Z Brassica rapa HOM05D001415 ORTHO05D001075 5.8e-08 60.5 40 62.5
Potri.010G226250 Populus trichocarpa HOM05D001415 ORTHO05D001075 5.8e-08 60.5 37 59.5
Prupe.2G209600 Prunus persica HOM05D001415 ORTHO05D001075 5.8e-08 60.5 57 43.9
BcaC02g11823 Brassica carinata HOM05D001415 ORTHO05D001075 7.6e-08 60.1 40 60.0
BcaC02g11824 Brassica carinata HOM05D001415 ORTHO05D001075 7.6e-08 60.1 40 60.0
C04p10960 Brassica napus HOM05D001415 ORTHO05D001075 7.6e-08 60.1 40 60.0
BolC4t22690H Brassica oleracea HOM05D001415 ORTHO05D001075 7.6e-08 60.1 40 60.0
Manes.07G133164 Manihot esculenta HOM05D001415 ORTHO05D001075 7.6e-08 60.1 51 51.0
Nn2g11570 Nelumbo nucifera HOM05D001415 ORTHO05D001075 7.6e-08 60.1 35 62.9
TWI74G0876 Tripterygium wilfordii HOM05D001415 ORTHO05D001075 7.6e-08 60.1 40 65.0
Gohir.A09G147800 Gossypium hirsutum HOM05D001415 ORTHO05D001075 1.3e-07 59.3 35 68.6
Potri.008G035900 Populus trichocarpa HOM05D001415 ORTHO05D001075 1.3e-07 59.3 35 60.0
BolC3t14783H Brassica oleracea HOM05D001415 ORTHO05D001075 1.7e-07 58.9 40 60.0
CSS0026842 Camellia sinensis var. sinensis HOM05D001415 ORTHO05D001075 1.7e-07 58.9 35 60.0
MD12G1114900 Malus domestica HOM05D001415 ORTHO05D001075 1.7e-07 58.9 69 44.9
BolC4t28054H Brassica oleracea HOM05D001415 ORTHO05D001075 2.2e-07 58.5 40 62.5
Glyma.10G122700 Glycine max HOM05D001415 ORTHO05D001075 2.2e-07 58.5 35 60.0
CiPaw.01G269600 Carya illinoinensis HOM05D001415 ORTHO05D001075 2.9e-07 58.2 50 52.0
A04p28260 Brassica napus HOM05D001415 ORTHO05D001075 3.8e-07 57.8 40 60.0
C04p65620 Brassica napus HOM05D001415 ORTHO05D001075 3.8e-07 57.8 51 49.0
CAN.G900.45 Capsicum annuum HOM05D001415 ORTHO05D001075 3.8e-07 57.8 32 71.9
BcaC02g07562 Brassica carinata HOM05D001415 ORTHO05D001075 4.9e-07 57.4 40 60.0
BcaC02g07563 Brassica carinata HOM05D001415 ORTHO05D001075 4.9e-07 57.4 40 60.0
BcaC02g07564 Brassica carinata HOM05D001415 ORTHO05D001075 4.9e-07 57.4 40 60.0
unitig_8.g4710 Utricularia gibba HOM05D001415 ORTHO05D001075 4.9e-07 57.4 32 71.9
Gohir.A04G072400 Gossypium hirsutum HOM05D001415 ORTHO05D001075 8.4e-07 56.6 47 55.3
Gohir.D04G111000 Gossypium hirsutum HOM05D001415 ORTHO05D001075 8.4e-07 56.6 47 55.3
Gorai.009G415100 Gossypium raimondii HOM05D001415 ORTHO05D001075 8.4e-07 56.6 47 55.3
Glyma.20G182300 Glycine max HOM05D001415 ORTHO05D001075 1.1e-06 56.2 35 62.9
MD04G1094700 Malus domestica HOM05D001415 ORTHO05D001075 1.1e-06 56.2 49 51.0
SHI12464 Sapria himalayana HOM05D001415 ORTHO05D001075 1.1e-06 56.2 48 52.1
HanXRQChr02g0053421 Helianthus annuus HOM05D001415 ORTHO05D001075 1.9e-06 55.5 32 65.6
Prupe.6G233800 Prunus persica HOM05D001415 ORTHO05D001075 1.9e-06 55.5 31 71.0
ClCG09G019600 Citrullus lanatus HOM05D001415 ORTHO05D001075 2.5e-06 55.1 39 56.4
MELO3C021616.2 Cucumis melo HOM05D001415 ORTHO05D001075 2.5e-06 55.1 39 56.4
CsaV3_5G026780 Cucumis sativus L. HOM05D001415 ORTHO05D001075 2.5e-06 55.1 39 56.4
Sed0021325 Sechium edule HOM05D001415 ORTHO05D001075 2.5e-06 55.1 32 68.8
ClCG04G009250 Citrullus lanatus HOM05D001415 ORTHO05D001075 3.2e-06 54.7 34 67.6
Migut.J00518 Erythranthe guttata HOM05D001415 ORTHO05D001075 3.2e-06 54.7 32 65.6
Phvul.001G233300 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 4.2e-06 54.3 49 44.9
CiPaw.02G172500 Carya illinoinensis HOM05D001415 ORTHO05D001075 5.5e-06 53.9 41 53.7
Hma1.2p1_1480F.1_g286050 Hydrangea macrophylla HOM05D001415 ORTHO05D001075 5.5e-06 53.9 40 52.5
FAN03G1064 Fragaria x ananassa HOM05D001415 ORTHO05D001075 7.1e-06 53.5 57 42.1
FAN10G0897 Fragaria x ananassa HOM05D001415 ORTHO05D001075 7.1e-06 53.5 32 62.5
Glyma.11G220000 Glycine max HOM05D001415 ORTHO05D001075 7.1e-06 53.5 37 59.5
Glyma.18G037400 Glycine max HOM05D001415 ORTHO05D001075 7.1e-06 53.5 37 59.5
HanXRQChr14g0454501 Helianthus annuus HOM05D001415 ORTHO05D001075 9.3e-06 53.1 65 43.1
Phvul.007G235700 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 9.3e-06 53.1 35 54.3
Potri.008G057800 Populus trichocarpa HOM05D001415 ORTHO05D001075 9.3e-06 53.1 48 47.9
THA.LOC109116388 Tarenaya hassleriana HOM05D001415 ORTHO05D001075 9.3e-06 53.1 32 65.6
TPR.G15833 Trifolium pratense HOM05D001415 ORTHO05D001075 9.3e-06 53.1 38 55.3


User provided reference genes

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