Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19974 Trifolium pratense HOM05D005087 ORTHO05D006427 1.1e-83 313.2 145 100.0
TPR.G14572 Trifolium pratense HOM05D005087 ORTHO05D006427 7.1e-19 97.8 129 45.7
Ca_14518_v3 Cicer arietinum L. HOM05D005087 ORTHO05D006427 3.9e-17 92.0 129 43.4
Medtr5g036330 Medicago truncatula HOM05D005087 ORTHO05D006427 2.5e-16 89.4 129 41.9
Medtr3g033470 Medicago truncatula HOM05D005087 ORTHO05D006427 4.3e-16 88.6 129 42.6
Medtr4g115050 Medicago truncatula HOM05D005087 ORTHO05D006427 5.7e-16 88.2 129 42.6
Psat6g018320 Pisum sativum HOM05D005087 ORTHO05D006427 1.3e-15 87.0 129 42.6
Phvul.002G285500 Phaseolus vulgaris HOM05D005087 ORTHO05D006427 1.6e-15 86.7 129 42.6
Glyma.20G198300 Glycine max HOM05D005087 ORTHO05D006427 2.2e-15 86.3 129 41.9
Lj3g0015731 Lotus japonicus HOM05D005087 ORTHO05D006427 2.8e-15 85.9 129 41.9
VMungo0251G2588 Vigna mungo HOM05D005087 ORTHO05D006427 3.7e-15 85.5 129 41.9
Ciclev10030582m.g Citrus clementina HOM05D005087 ORTHO05D006427 4.1e-14 82.0 129 38.8
Medtr5g036370 Medicago truncatula HOM05D005087 ORTHO05D006427 9.0e-14 80.9 129 40.3
CiPaw.14G002700 Carya illinoinensis HOM05D005087 ORTHO05D006427 1.2e-13 80.5 129 38.0
Haze_03133 Corylus avellana HOM05D005087 ORTHO05D006427 1.2e-13 80.5 129 38.0
Haze_03136 Corylus avellana HOM05D005087 ORTHO05D006427 1.2e-13 80.5 129 38.0
CsaV3_7G030750 Cucumis sativus L. HOM05D005087 ORTHO05D006427 2.6e-13 79.3 129 36.4
Sed0026614 Sechium edule HOM05D005087 ORTHO05D006427 2.6e-13 79.3 129 36.4
ClCG09G004390 Citrullus lanatus HOM05D005087 ORTHO05D006427 4.5e-13 78.6 129 36.4
MELO3C023581.2 Cucumis melo HOM05D005087 ORTHO05D006427 7.7e-13 77.8 129 35.7
Lalb_Chr04g0263871 Lupinus albus HOM05D005087 ORTHO05D006427 1.0e-12 77.4 129 39.5
QL04p009808 Quercus lobata HOM05D005087 ORTHO05D006427 1.3e-12 77.0 128 35.9
GSVIVG01032195001 Vitis vinifera HOM05D005087 ORTHO05D006427 1.3e-12 77.0 129 36.4
CSS0029256 Camellia sinensis var. sinensis HOM05D005087 ORTHO05D006427 2.2e-12 76.3 129 36.4
Lj3g0013327 Lotus japonicus HOM05D005087 ORTHO05D006427 2.2e-12 76.3 129 39.5
Potri.001G262600 Populus trichocarpa HOM05D005087 ORTHO05D006427 3.8e-12 75.5 129 35.7
Thecc.05G218700 Theobroma cacao HOM05D005087 ORTHO05D006427 5.0e-12 75.1 129 37.2
TAR623G1255 Trochodendron aralioides HOM05D005087 ORTHO05D006427 6.5e-12 74.7 127 36.2
EL10Ac2g04365 Beta vulgaris HOM05D005087 ORTHO05D006427 8.5e-12 74.3 129 34.1
Cpa.g.sc125.40 Carica papaya HOM05D005087 ORTHO05D006427 8.5e-12 74.3 129 36.4
Actinidia21540 Actinidia chinensis HOM05D005087 ORTHO05D006427 1.4e-11 73.6 129 35.7
Duzib177G0717 Durio zibethinus HOM05D005087 ORTHO05D006427 1.4e-11 73.6 129 36.4
Atru.chr11.2578 Acer truncatum HOM05D005087 ORTHO05D006427 1.9e-11 73.2 130 36.2
Prupe.2G022000 Prunus persica HOM05D005087 ORTHO05D006427 1.9e-11 73.2 129 34.9
FvH4_7g01640 Fragaria vesca HOM05D005087 ORTHO05D006427 2.5e-11 72.8 129 34.1
FAN03G0563 Fragaria x ananassa HOM05D005087 ORTHO05D006427 2.5e-11 72.8 129 34.1
FAN10G1149 Fragaria x ananassa HOM05D005087 ORTHO05D006427 2.5e-11 72.8 129 34.1
Hund09863 Selenicereus undatus HOM05D005087 ORTHO05D006427 5.5e-11 71.6 129 33.3
Cfa022636 Carpinus fangiana HOM05D005087 ORTHO05D006427 7.2e-11 71.2 125 34.4
Manes.10G136400 Manihot esculenta HOM05D005087 ORTHO05D006427 7.2e-11 71.2 125 35.2
SGA_v2.0_scaffold119G32758 Striga asiatica HOM05D005087 ORTHO05D006427 7.2e-11 71.2 129 35.7
Aa31LG11G13680 Aethionema arabicum HOM05D005087 ORTHO05D006427 1.2e-10 70.5 136 35.3
RcHm_v2.0_Chr1g0317911 Rosa chinensis HOM05D005087 ORTHO05D006427 1.2e-10 70.5 129 33.3
Migut.B01270 Erythranthe guttata HOM05D005087 ORTHO05D006427 2.1e-10 69.7 129 35.7
FAN06G3789 Fragaria x ananassa HOM05D005087 ORTHO05D006427 2.1e-10 69.7 129 33.3
Gohir.A13G157100 Gossypium hirsutum HOM05D005087 ORTHO05D006427 2.1e-10 69.7 126 37.3
Gohir.D13G161900 Gossypium hirsutum HOM05D005087 ORTHO05D006427 2.1e-10 69.7 126 37.3
Gorai.013G183900 Gossypium raimondii HOM05D005087 ORTHO05D006427 2.1e-10 69.7 126 37.3
SalBow5G0870 Salvia bowleyana HOM05D005087 ORTHO05D006427 2.7e-10 69.3 129 35.7
SalBow5G2001 Salvia bowleyana HOM05D005087 ORTHO05D006427 2.7e-10 69.3 129 35.7
AL6G26800 Arabidopsis lyrata HOM05D005087 ORTHO05D006427 3.6e-10 68.9 128 33.6
THA.LOC104819098 Tarenaya hassleriana HOM05D005087 ORTHO05D006427 3.6e-10 68.9 128 33.6
MSTRG.17010 Avicennia marina HOM05D005087 ORTHO05D006427 4.6e-10 68.6 129 35.7
CARHR197390 Cardamine hirsuta HOM05D005087 ORTHO05D006427 4.6e-10 68.6 128 33.6
Eucgr.G03334 Eucalyptus grandis HOM05D005087 ORTHO05D006427 6.1e-10 68.2 125 35.2
Hma1.2p1_0685F.1_g203150 Hydrangea macrophylla HOM05D005087 ORTHO05D006427 6.1e-10 68.2 126 34.1
Nn7g36293 Nelumbo nucifera HOM05D005087 ORTHO05D006427 6.1e-10 68.2 125 36.0
Cc02_g28540 Coffea canephora HOM05D005087 ORTHO05D006427 1.0e-09 67.4 129 33.3
Thhalv10012535m.g Eutrema salsugineum HOM05D005087 ORTHO05D006427 1.4e-09 67.0 128 32.8
Peaxi162Scf00694g00319 Petunia axillaris HOM05D005087 ORTHO05D006427 1.8e-09 66.6 128 35.2
Carub.0006s1411 Capsella rubella HOM05D005087 ORTHO05D006427 2.3e-09 66.2 128 32.8
Lj9C640G8 Lonicera japonica HOM05D005087 ORTHO05D006427 2.3e-09 66.2 133 33.8
Sp6g28190 Schrenkiella parvula HOM05D005087 ORTHO05D006427 3.0e-09 65.9 128 32.0
Oeu049480.1 Olea europaea HOM05D005087 ORTHO05D006427 3.9e-09 65.5 129 33.3
Os05g0596600 Oryza sativa ssp. japonica HOM05D005087 ORTHO05D006427 3.9e-09 65.5 125 34.4
BcaB01g05014 Brassica carinata HOM05D005087 ORTHO05D006427 6.7e-09 64.7 119 34.5
A03p07470 Brassica napus HOM05D005087 ORTHO05D006427 6.7e-09 64.7 119 34.5
C03p08670 Brassica napus HOM05D005087 ORTHO05D006427 6.7e-09 64.7 119 34.5
BolC3t13367H Brassica oleracea HOM05D005087 ORTHO05D006427 6.7e-09 64.7 119 34.5
BraA03t10076Z Brassica rapa HOM05D005087 ORTHO05D006427 6.7e-09 64.7 119 34.5
Nitab4.5_0000707g0060 Nicotiana tabacum HOM05D005087 ORTHO05D006427 1.1e-08 63.9 128 34.4
Solyc01g087720.4 Solanum lycopersicum HOM05D005087 ORTHO05D006427 1.5e-08 63.5 121 35.5
Sopen01g034670 Solanum pennellii HOM05D005087 ORTHO05D006427 1.5e-08 63.5 121 35.5
CANSAT80G0443 Cannabis sativa HOM05D005087 ORTHO05D006427 2.0e-08 63.2 121 33.1
Rhsim01G0127000 Rhododendron simsii HOM05D005087 ORTHO05D006427 2.0e-08 63.2 124 33.1
SEGI_29436 Sequoiadendron giganteum HOM05D005087 ORTHO05D006427 4.3e-08 62.0 119 32.8
Aqoxy1G00327 Aquilegia oxysepala HOM05D005087 ORTHO05D006427 5.7e-08 61.6 121 33.1
TWI09G0473 Tripterygium wilfordii HOM05D005087 ORTHO05D006427 5.7e-08 61.6 121 32.2
FAN01G1492 Fragaria x ananassa HOM05D005087 ORTHO05D006427 7.4e-08 61.2 36 61.1
PSO339G3397 Papaver somniferum HOM05D005087 ORTHO05D006427 7.4e-08 61.2 125 31.2
PSO210G7144 Papaver somniferum HOM05D005087 ORTHO05D006427 9.7e-08 60.8 123 32.5
PSO384G1020 Papaver somniferum HOM05D005087 ORTHO05D006427 1.3e-07 60.5 125 31.2
AT5G15920 Arabidopsis thaliana HOM05D005087 ORTHO05D006427 1.7e-07 60.1 119 32.8
HanXRQChr01g0007751 Helianthus annuus HOM05D005087 ORTHO05D006427 1.7e-07 60.1 134 31.3
CDE09G1121 Ceratophyllum demersum HOM05D005087 ORTHO05D006427 2.8e-07 59.3 121 31.4
ECA248G2604 Erigeron canadensis HOM05D005087 ORTHO05D006427 2.8e-07 59.3 134 30.6
SEGI_04619 Sequoiadendron giganteum HOM05D005087 ORTHO05D006427 2.8e-07 59.3 125 31.2
PGR031G1517 Punica granatum HOM05D005087 ORTHO05D006427 5.3e-06 55.1 121 30.6


User provided reference genes

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