Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19538 Trifolium pratense HOM05D001873 ORTHO05D413249 1.2e-15 86.3 80 100.0
Phvul.001G190900 Phaseolus vulgaris HOM05D001873 ORTHO05D001976 2.8e-09 65.1 33 90.9
TPR.G23326 Trifolium pratense HOM05D001873 ORTHO05D001976 3.7e-09 64.7 33 90.9
VMungo1383G3019 Vigna mungo HOM05D001873 ORTHO05D001976 1.1e-08 63.2 33 87.9
Ca_09012_v3 Cicer arietinum L. HOM05D001873 ORTHO05D001976 2.4e-08 62.0 32 87.5
Glyma.03G196700 Glycine max HOM05D001873 ORTHO05D001976 2.4e-08 62.0 33 84.8
Medtr7g104800 Medicago truncatula HOM05D001873 ORTHO05D001976 2.4e-08 62.0 33 84.8
arahy.Tifrunner.gnm1.ann1.AJL8C7 Arachis hypogaea HOM05D001873 ORTHO05D001976 5.3e-08 60.8 32 84.4
arahy.Tifrunner.gnm1.ann1.TJRX0G Arachis hypogaea HOM05D001873 ORTHO05D001976 5.3e-08 60.8 32 84.4
Sabra06G0163500 Salix brachista HOM05D001873 ORTHO05D001976 1.2e-07 59.7 32 78.1
Lj2C138T5 Lonicera japonica HOM05D001873 ORTHO05D001976 1.6e-07 59.3 31 83.9
Lalb_Chr20g0111671 Lupinus albus HOM05D001873 ORTHO05D001976 1.6e-07 59.3 33 75.8
Cpa.g.sc5.9 Carica papaya HOM05D001873 ORTHO05D001976 2.0e-07 58.9 32 81.2
VMungo1127G1988 Vigna mungo HOM05D001873 ORTHO05D001976 2.0e-07 58.9 32 84.4
Lj1g0023535 Lotus japonicus HOM05D001873 ORTHO05D001976 2.7e-07 58.5 33 81.8
CiPaw.13G135300 Carya illinoinensis HOM05D001873 ORTHO05D001976 3.5e-07 58.2 33 78.8
Lalb_Chr19g0136441 Lupinus albus HOM05D001873 ORTHO05D001976 3.5e-07 58.2 32 81.2
Potri.016G079200 Populus trichocarpa HOM05D001873 ORTHO05D001976 3.5e-07 58.2 32 78.1
QL01p012181 Quercus lobata HOM05D001873 ORTHO05D001976 3.5e-07 58.2 33 78.8
Sabra16G0087000 Salix brachista HOM05D001873 ORTHO05D001976 3.5e-07 58.2 32 75.0
CANSAT01G2217 Cannabis sativa HOM05D001873 ORTHO05D001976 4.5e-07 57.8 32 78.1
Duzib170G0866 Durio zibethinus HOM05D001873 ORTHO05D001976 4.5e-07 57.8 31 80.6
FvH4_3g24960 Fragaria vesca HOM05D001873 ORTHO05D001976 4.5e-07 57.8 33 78.8
FAN11G3771 Fragaria x ananassa HOM05D001873 ORTHO05D001976 4.5e-07 57.8 33 78.8
FAN21G2087 Fragaria x ananassa HOM05D001873 ORTHO05D001976 4.5e-07 57.8 33 78.8
FAN25G0526 Fragaria x ananassa HOM05D001873 ORTHO05D001976 4.5e-07 57.8 33 78.8
Gohir.D04G098900 Gossypium hirsutum HOM05D001873 ORTHO05D001976 4.5e-07 57.8 32 81.2
Gorai.009G401300 Gossypium raimondii HOM05D001873 ORTHO05D001976 4.5e-07 57.8 32 81.2
Phvul.011G094700 Phaseolus vulgaris HOM05D001873 ORTHO05D001976 4.5e-07 57.8 32 81.2
Potri.006G212400 Populus trichocarpa HOM05D001873 ORTHO05D001976 4.5e-07 57.8 31 77.4
ClCG02G022250 Citrullus lanatus HOM05D001873 ORTHO05D001976 5.9e-07 57.4 32 78.1
Ciclev10028342m.g Citrus clementina HOM05D001873 ORTHO05D001976 5.9e-07 57.4 32 81.2
Thecc.05G090400 Theobroma cacao HOM05D001873 ORTHO05D001976 5.9e-07 57.4 32 78.1
TWI74G1254 Tripterygium wilfordii HOM05D001873 ORTHO05D001976 5.9e-07 57.4 32 78.1
TWI79G0697 Tripterygium wilfordii HOM05D001873 ORTHO05D001976 5.9e-07 57.4 32 78.1
COL.COLO4_19856 Corchorus olitorius HOM05D001873 ORTHO05D001976 7.7e-07 57.0 32 78.1
Prupe.6G130600 Prunus persica HOM05D001873 ORTHO05D001976 7.7e-07 57.0 33 78.8
Sp5g09640 Schrenkiella parvula HOM05D001873 ORTHO05D001976 7.7e-07 57.0 32 81.2
Atru.chr8.1485 Acer truncatum HOM05D001873 ORTHO05D001976 1.0e-06 56.6 32 78.1
MELO3C014502.2 Cucumis melo HOM05D001873 ORTHO05D001976 1.0e-06 56.6 32 78.1
Hma1.2p1_0587F.1_g184330 Hydrangea macrophylla HOM05D001873 ORTHO05D001976 1.0e-06 56.6 31 80.6
MD11G1164700 Malus domestica HOM05D001873 ORTHO05D001976 1.0e-06 56.6 32 78.1
Potri.004G201900 Populus trichocarpa HOM05D001873 ORTHO05D001976 1.0e-06 56.6 32 78.1
Sed0005634 Sechium edule HOM05D001873 ORTHO05D001976 1.0e-06 56.6 32 81.2
CSS0019368 Camellia sinensis var. sinensis HOM05D001873 ORTHO05D001976 1.3e-06 56.2 32 75.0
COL.COLO4_29717 Corchorus olitorius HOM05D001873 ORTHO05D001976 1.3e-06 56.2 32 75.0
Gohir.A05G080400 Gossypium hirsutum HOM05D001873 ORTHO05D001976 1.3e-06 56.2 32 78.1
Gohir.D01G195100 Gossypium hirsutum HOM05D001873 ORTHO05D001976 1.3e-06 56.2 32 75.0
Gohir.D05G083400 Gossypium hirsutum HOM05D001873 ORTHO05D001976 1.3e-06 56.2 32 78.1
Gorai.009G085100 Gossypium raimondii HOM05D001873 ORTHO05D001976 1.3e-06 56.2 32 78.1
Lj1g0005537 Lotus japonicus HOM05D001873 ORTHO05D001976 1.3e-06 56.2 33 78.8
Cfa016619 Carpinus fangiana HOM05D001873 ORTHO05D001976 1.7e-06 55.8 32 75.0
Haze_19624 Corylus avellana HOM05D001873 ORTHO05D001976 1.7e-06 55.8 32 75.0
Dinv21198 Davidia involucrata HOM05D001873 ORTHO05D001976 1.7e-06 55.8 32 75.0
Eucgr.B03847 Eucalyptus grandis HOM05D001873 ORTHO05D001976 1.7e-06 55.8 32 78.1
Lalb_Chr01g0004871 Lupinus albus HOM05D001873 ORTHO05D001976 1.7e-06 55.8 32 78.1
THA.LOC104804892 Tarenaya hassleriana HOM05D001873 ORTHO05D001976 1.7e-06 55.8 31 77.4
Atru.chr3.3237 Acer truncatum HOM05D001873 ORTHO05D001976 2.2e-06 55.5 32 78.1
BcaC07g39632 Brassica carinata HOM05D001873 ORTHO05D001976 2.2e-06 55.5 32 78.1
A09p45730 Brassica napus HOM05D001873 ORTHO05D001976 2.2e-06 55.5 32 78.1
C08p27950 Brassica napus HOM05D001873 ORTHO05D001976 2.2e-06 55.5 32 78.1
BolC8t50407H Brassica oleracea HOM05D001873 ORTHO05D001976 2.2e-06 55.5 32 78.1
BraA09t40033Z Brassica rapa HOM05D001873 ORTHO05D001976 2.2e-06 55.5 32 78.1
Ciclev10011562m.g Citrus clementina HOM05D001873 ORTHO05D001976 2.2e-06 55.5 32 75.0
Nitab4.5_0003094g0040 Nicotiana tabacum HOM05D001873 ORTHO05D001976 2.2e-06 55.5 32 75.0
Sc02g0000300 Simmondsia chinensis HOM05D001873 ORTHO05D001976 2.2e-06 55.5 32 75.0
SGA_v2.0_scaffold35G14058 Striga asiatica HOM05D001873 ORTHO05D001976 2.2e-06 55.5 32 71.9
AUR62006192 Chenopodium quinoa HOM05D001873 ORTHO05D001976 2.9e-06 55.1 32 75.0
Duzib106G1456 Durio zibethinus HOM05D001873 ORTHO05D001976 2.9e-06 55.1 32 75.0
FAN16G2633 Fragaria x ananassa HOM05D001873 ORTHO05D001976 2.9e-06 55.1 33 75.8
MBI19_g24050_MAGBIO Magnolia biondii HOM05D001873 ORTHO05D001976 2.9e-06 55.1 30 80.0
Prupe.7G108900 Prunus persica HOM05D001873 ORTHO05D001976 2.9e-06 55.1 32 75.0
RcHm_v2.0_Chr5g0044751 Rosa chinensis HOM05D001873 ORTHO05D001976 2.9e-06 55.1 33 72.7
Solyc10g009220.3 Solanum lycopersicum HOM05D001873 ORTHO05D001976 2.9e-06 55.1 32 75.0
Sopen10g005010 Solanum pennellii HOM05D001873 ORTHO05D001976 2.9e-06 55.1 32 75.0
Thecc.01G334600 Theobroma cacao HOM05D001873 ORTHO05D001976 2.9e-06 55.1 32 71.9
Aqoxy5G04327 Aquilegia oxysepala HOM05D001873 ORTHO05D001976 3.8e-06 54.7 32 71.9
CARHR162480 Cardamine hirsuta HOM05D001873 ORTHO05D001976 3.8e-06 54.7 32 75.0
AUR62037030 Chenopodium quinoa HOM05D001873 ORTHO05D001976 3.8e-06 54.7 32 71.9
CsaV3_6G038380 Cucumis sativus L. HOM05D001873 ORTHO05D001976 3.8e-06 54.7 31 77.4
DCAR_013396 Daucus carota HOM05D001873 ORTHO05D001976 3.8e-06 54.7 32 75.0
Sabra16G0084300 Salix brachista HOM05D001873 ORTHO05D001976 3.8e-06 54.7 32 71.9
Sabra16G0084900 Salix brachista HOM05D001873 ORTHO05D001976 3.8e-06 54.7 32 71.9
Hund03993 Selenicereus undatus HOM05D001873 ORTHO05D001976 3.8e-06 54.7 32 71.9
SGA_v2.0_scaffold184G39970 Striga asiatica HOM05D001873 ORTHO05D001976 3.8e-06 54.7 32 75.0
arahy.Tifrunner.gnm1.ann1.URJP9L Arachis hypogaea HOM05D001873 ORTHO05D001976 5.0e-06 54.3 32 75.0
CSS0021983 Camellia sinensis var. sinensis HOM05D001873 ORTHO05D001976 5.0e-06 54.3 32 68.8
Dinv34254 Davidia involucrata HOM05D001873 ORTHO05D001976 5.0e-06 54.3 32 68.8
FAN05G0160 Fragaria x ananassa HOM05D001873 ORTHO05D001976 5.0e-06 54.3 32 75.0
FAN09G0313 Fragaria x ananassa HOM05D001873 ORTHO05D001976 5.0e-06 54.3 32 75.0
Nn2g14174 Nelumbo nucifera HOM05D001873 ORTHO05D001976 5.0e-06 54.3 31 80.6
RcHm_v2.0_Chr3g0473891 Rosa chinensis HOM05D001873 ORTHO05D001976 5.0e-06 54.3 32 75.0
Sabra04G0136500 Salix brachista HOM05D001873 ORTHO05D001976 5.0e-06 54.3 32 78.1
GSVIVG01036119001 Vitis vinifera HOM05D001873 ORTHO05D001976 5.0e-06 54.3 31 77.4
Aa31LG10G7710 Aethionema arabicum HOM05D001873 ORTHO05D001976 6.5e-06 53.9 30 80.0
ATR0579G100 Amborella trichopoda HOM05D001873 ORTHO05D001976 6.5e-06 53.9 31 71.0
ATR0776G050 Amborella trichopoda HOM05D001873 ORTHO05D001976 6.5e-06 53.9 32 68.8
Aqoxy2G01132 Aquilegia oxysepala HOM05D001873 ORTHO05D001976 6.5e-06 53.9 31 77.4
AT3G52660 Arabidopsis thaliana HOM05D001873 ORTHO05D001976 6.5e-06 53.9 32 71.9
BcaB02g07822 Brassica carinata HOM05D001873 ORTHO05D001976 6.5e-06 53.9 30 80.0
Gohir.A01G205600 Gossypium hirsutum HOM05D001873 ORTHO05D001976 6.5e-06 53.9 32 71.9
Gohir.A04G062100 Gossypium hirsutum HOM05D001873 ORTHO05D001976 6.5e-06 53.9 30 80.0
Gorai.002G239200 Gossypium raimondii HOM05D001873 ORTHO05D001976 6.5e-06 53.9 32 71.9
PSO339G6691 Papaver somniferum HOM05D001873 ORTHO05D001976 6.5e-06 53.9 31 71.0
PSO384G0789 Papaver somniferum HOM05D001873 ORTHO05D001976 6.5e-06 53.9 31 71.0
Sabra09G0127500 Salix brachista HOM05D001873 ORTHO05D001976 6.5e-06 53.9 32 75.0
Thecc.09G282600 Theobroma cacao HOM05D001873 ORTHO05D001976 6.5e-06 53.9 32 78.1
TAR636G0288 Trochodendron aralioides HOM05D001873 ORTHO05D001976 6.5e-06 53.9 32 75.0
vmacro12650 Vaccinium macrocarpon HOM05D001873 ORTHO05D001976 6.5e-06 53.9 32 71.9
BcaB01g00350 Brassica carinata HOM05D001873 ORTHO05D001976 8.5e-06 53.5 32 71.9
Duzib150G1484 Durio zibethinus HOM05D001873 ORTHO05D001976 8.5e-06 53.5 32 71.9
Gohir.D11G105000 Gossypium hirsutum HOM05D001873 ORTHO05D001976 8.5e-06 53.5 32 68.8
Gorai.007G112300 Gossypium raimondii HOM05D001873 ORTHO05D001976 8.5e-06 53.5 32 68.8
Lj3g0024197 Lotus japonicus HOM05D001873 ORTHO05D001976 8.5e-06 53.5 32 75.0
Manes.04G003300 Manihot esculenta HOM05D001873 ORTHO05D001976 8.5e-06 53.5 32 71.9
Sed0012361 Sechium edule HOM05D001873 ORTHO05D001976 8.5e-06 53.5 32 75.0
Hund19923 Selenicereus undatus HOM05D001873 ORTHO05D001976 8.5e-06 53.5 32 68.8
GSVIVG01033857001 Vitis vinifera HOM05D001873 ORTHO05D001976 8.5e-06 53.5 31 71.0


User provided reference genes

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