Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G19390 Trifolium pratense HOM05D003169 ORTHO05D003700 9.4e-40 166.4 83 100.0
TPR.G3624 Trifolium pratense HOM05D003169 ORTHO05D003700 2.8e-28 128.3 74 89.2
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 2.1e-23 112.1 70 81.4
Medtr2g063620 Medicago truncatula HOM05D003169 ORTHO05D003700 8.0e-23 110.2 76 76.3
Psat0s11g0040 Pisum sativum HOM05D003169 ORTHO05D003700 8.0e-23 110.2 70 80.0
Lalb_Chr19g0133151 Lupinus albus HOM05D003169 ORTHO05D003700 1.8e-22 109.0 70 80.0
arahy.Tifrunner.gnm1.ann1.0T77JN Arachis hypogaea HOM05D003169 ORTHO05D003700 4.0e-22 107.8 70 78.6
arahy.Tifrunner.gnm1.ann1.4D9FZH Arachis hypogaea HOM05D003169 ORTHO05D003700 5.2e-22 107.5 70 77.1
Manes.16G048930 Manihot esculenta HOM05D003169 ORTHO05D003700 5.2e-22 107.5 70 75.7
Medtr2g063813 Medicago truncatula HOM05D003169 ORTHO05D003700 8.8e-22 106.7 79 70.9
Medtr6g091960 Medicago truncatula HOM05D003169 ORTHO05D003700 8.8e-22 106.7 79 70.9
CiPaw.15G111900 Carya illinoinensis HOM05D003169 ORTHO05D003700 1.1e-21 106.3 70 75.7
Cfa017765 Carpinus fangiana HOM05D003169 ORTHO05D003700 1.5e-21 105.9 70 74.3
Potri.010G174900 Populus trichocarpa HOM05D003169 ORTHO05D003700 1.5e-21 105.9 70 74.3
TWI38G0104 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 1.5e-21 105.9 70 74.3
TWI38G0597 Tripterygium wilfordii HOM05D003169 ORTHO05D003700 1.5e-21 105.9 70 74.3
MD05G1239900 Malus domestica HOM05D003169 ORTHO05D003700 2.0e-21 105.5 70 75.7
Atru.chr1.22 Acer truncatum HOM05D003169 ORTHO05D003700 2.6e-21 105.1 70 72.9
CANSAT56G1976 Cannabis sativa HOM05D003169 ORTHO05D003700 3.3e-21 104.8 70 75.7
Prupe.4G126100 Prunus persica HOM05D003169 ORTHO05D003700 3.3e-21 104.8 70 74.3
QL04p010784 Quercus lobata HOM05D003169 ORTHO05D003700 3.3e-21 104.8 70 74.3
QL04p095761 Quercus lobata HOM05D003169 ORTHO05D003700 3.3e-21 104.8 70 74.3
TAR627G0022 Trochodendron aralioides HOM05D003169 ORTHO05D003700 3.3e-21 104.8 70 75.7
FvH4_3g13920 Fragaria vesca HOM05D003169 ORTHO05D003700 5.7e-21 104.0 70 74.3
Gohir.A13G126700 Gossypium hirsutum HOM05D003169 ORTHO05D003700 5.7e-21 104.0 70 71.4
Gohir.D13G130400 Gossypium hirsutum HOM05D003169 ORTHO05D003700 5.7e-21 104.0 70 71.4
Gorai.013G146500 Gossypium raimondii HOM05D003169 ORTHO05D003700 5.7e-21 104.0 70 71.4
RcHm_v2.0_Chr5g0023151 Rosa chinensis HOM05D003169 ORTHO05D003700 5.7e-21 104.0 70 74.3
TPR.G39754 Trifolium pratense HOM05D003169 ORTHO05D003700 5.7e-21 104.0 60 88.3
Lj3g0024633 Lotus japonicus HOM05D003169 ORTHO05D003700 9.7e-21 103.2 70 74.3
Phvul.011G180100 Phaseolus vulgaris HOM05D003169 ORTHO05D003700 9.7e-21 103.2 70 75.7
PGR031G0700 Punica granatum HOM05D003169 ORTHO05D003700 9.7e-21 103.2 70 74.3
VMungo1127G0192 Vigna mungo HOM05D003169 ORTHO05D003700 9.7e-21 103.2 70 75.7
Glyma.15G219200 Glycine max HOM05D003169 ORTHO05D003700 1.3e-20 102.8 70 74.3
MD10G1218000 Malus domestica HOM05D003169 ORTHO05D003700 1.3e-20 102.8 70 74.3
EL10Ac2g03244 Beta vulgaris HOM05D003169 ORTHO05D003700 1.7e-20 102.4 70 70.0
Glyma.08G233702 Glycine max HOM05D003169 ORTHO05D003700 1.7e-20 102.4 70 74.3
Hma1.2p1_0754F.1_g213010 Hydrangea macrophylla HOM05D003169 ORTHO05D003700 1.7e-20 102.4 70 71.4
Sabra10G0134700 Salix brachista HOM05D003169 ORTHO05D003700 2.2e-20 102.1 70 71.4
Thecc.07G189500 Theobroma cacao HOM05D003169 ORTHO05D003700 2.2e-20 102.1 70 71.4
AUR62043014 Chenopodium quinoa HOM05D003169 ORTHO05D003700 2.8e-20 101.7 70 68.6
Ca_22977_v3 Cicer arietinum L. HOM05D003169 ORTHO05D003700 2.8e-20 101.7 70 72.9
Duzib213G0284 Durio zibethinus HOM05D003169 ORTHO05D003700 2.8e-20 101.7 70 70.0
SGA_v2.0_scaffold186G40168 Striga asiatica HOM05D003169 ORTHO05D003700 2.8e-20 101.7 70 71.4
TAR629G1197 Trochodendron aralioides HOM05D003169 ORTHO05D003700 2.8e-20 101.7 70 70.0
Cpa.g.sc32.147 Carica papaya HOM05D003169 ORTHO05D003700 3.7e-20 101.3 70 68.6
Dinv42454 Davidia involucrata HOM05D003169 ORTHO05D003700 3.7e-20 101.3 70 71.4
Nn7g38410 Nelumbo nucifera HOM05D003169 ORTHO05D003700 4.8e-20 100.9 70 72.9
MSTRG.7098 Avicennia marina HOM05D003169 ORTHO05D003700 6.3e-20 100.5 70 70.0
Cc00_g09100 Coffea canephora HOM05D003169 ORTHO05D003700 6.3e-20 100.5 70 70.0
Oeu029455.1 Olea europaea HOM05D003169 ORTHO05D003700 6.3e-20 100.5 70 72.9
Sed0006985 Sechium edule HOM05D003169 ORTHO05D003700 6.3e-20 100.5 70 70.0
Medtr8g447090 Medicago truncatula HOM05D003169 ORTHO05D003700 8.2e-20 100.1 70 72.9
Peaxi162Scf00670g00216 Petunia axillaris HOM05D003169 ORTHO05D003700 8.2e-20 100.1 70 68.6
TPR.G30141 Trifolium pratense HOM05D003169 ORTHO05D003700 8.2e-20 100.1 70 72.9
Lalb_Chr20g0108381 Lupinus albus HOM05D003169 ORTHO05D003700 1.1e-19 99.8 70 71.4
CSS0011288 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 1.4e-19 99.4 70 70.0
MELO3C019615.2 Cucumis melo HOM05D003169 ORTHO05D003700 1.4e-19 99.4 70 67.1
CsaV3_6G013370 Cucumis sativus L. HOM05D003169 ORTHO05D003700 1.4e-19 99.4 70 67.1
vmacro22494 Vaccinium macrocarpon HOM05D003169 ORTHO05D003700 1.4e-19 99.4 70 68.6
GSVIVG01036703001 Vitis vinifera HOM05D003169 ORTHO05D003700 1.4e-19 99.4 70 70.0
AUR62041054 Chenopodium quinoa HOM05D003169 ORTHO05D003700 1.8e-19 99.0 70 67.1
Potri.008G081200 Populus trichocarpa HOM05D003169 ORTHO05D003700 1.8e-19 99.0 70 70.0
Rhsim06G0244800 Rhododendron simsii HOM05D003169 ORTHO05D003700 1.8e-19 99.0 70 68.6
Nitab4.5_0003291g0060 Nicotiana tabacum HOM05D003169 ORTHO05D003700 2.4e-19 98.6 70 67.1
Nitab4.5_0007774g0020 Nicotiana tabacum HOM05D003169 ORTHO05D003700 2.4e-19 98.6 70 67.1
Psat4g185200 Pisum sativum HOM05D003169 ORTHO05D003700 2.4e-19 98.6 70 71.4
arahy.Tifrunner.gnm1.ann1.THX68V Arachis hypogaea HOM05D003169 ORTHO05D003700 3.1e-19 98.2 70 67.1
Migut.M01496 Erythranthe guttata HOM05D003169 ORTHO05D003700 3.1e-19 98.2 70 68.6
Oeu025995.1 Olea europaea HOM05D003169 ORTHO05D003700 3.1e-19 98.2 70 67.1
THA.LOC104812392 Tarenaya hassleriana HOM05D003169 ORTHO05D003700 3.1e-19 98.2 70 70.0
arahy.Tifrunner.gnm1.ann1.JSN7JY Arachis hypogaea HOM05D003169 ORTHO05D003700 4.1e-19 97.8 70 67.1
Actinidia26204 Actinidia chinensis HOM05D003169 ORTHO05D003700 5.3e-19 97.4 69 69.6
Lj2A8G61 Lonicera japonica HOM05D003169 ORTHO05D003700 5.3e-19 97.4 70 67.1
Lj3g0007581 Lotus japonicus HOM05D003169 ORTHO05D003700 5.3e-19 97.4 70 68.6
PSO541G6458 Papaver somniferum HOM05D003169 ORTHO05D003700 5.3e-19 97.4 70 68.6
PSO675G7315 Papaver somniferum HOM05D003169 ORTHO05D003700 5.3e-19 97.4 70 68.6
CAN.G492.81 Capsicum annuum HOM05D003169 ORTHO05D003700 7.0e-19 97.1 70 67.1
FAN21G1262 Fragaria x ananassa HOM05D003169 ORTHO05D003700 7.0e-19 97.1 77 67.5
FAN25G3213 Fragaria x ananassa HOM05D003169 ORTHO05D003700 7.0e-19 97.1 77 67.5
Lsat_1_v5_gn_7_69060 Lactuca sativa HOM05D003169 ORTHO05D003700 7.0e-19 97.1 70 70.0
Eucgr.F04478 Eucalyptus grandis HOM05D003169 ORTHO05D003700 9.1e-19 96.7 70 68.6
Sopen10g001470 Solanum pennellii HOM05D003169 ORTHO05D003700 9.1e-19 96.7 70 67.1
ECA240G3251 Erigeron canadensis HOM05D003169 ORTHO05D003700 1.6e-18 95.9 70 68.6
Oeu032680.1 Olea europaea HOM05D003169 ORTHO05D003700 1.6e-18 95.9 70 68.6
HanXRQChr03g0077801 Helianthus annuus HOM05D003169 ORTHO05D003700 3.5e-18 94.7 70 67.1
Hund20128 Selenicereus undatus HOM05D003169 ORTHO05D003700 3.5e-18 94.7 70 64.3
AT1G79350 Arabidopsis thaliana HOM05D003169 ORTHO05D003700 1.0e-17 93.2 70 65.7
Carub.0002s2621 Capsella rubella HOM05D003169 ORTHO05D003700 1.0e-17 93.2 70 65.7
Thhalv10018021m.g Eutrema salsugineum HOM05D003169 ORTHO05D003700 1.0e-17 93.2 70 65.7
Sp5g34410 Schrenkiella parvula HOM05D003169 ORTHO05D003700 1.0e-17 93.2 70 65.7
HPP92_005947 Vanilla planifolia HOM05D003169 ORTHO05D003700 1.0e-17 93.2 70 64.3
Aa31LG4G1680 Aethionema arabicum HOM05D003169 ORTHO05D003700 2.2e-17 92.0 70 64.3
ATR0794G028 Amborella trichopoda HOM05D003169 ORTHO05D003700 2.2e-17 92.0 69 66.7
HanXRQChr13g0408911 Helianthus annuus HOM05D003169 ORTHO05D003700 2.2e-17 92.0 70 64.3
HanXRQChr13g0408941 Helianthus annuus HOM05D003169 ORTHO05D003700 2.2e-17 92.0 70 64.3
SEGI_09386 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 2.2e-17 92.0 70 65.7
CSS0003080 Camellia sinensis var. sinensis HOM05D003169 ORTHO05D003700 2.9e-17 91.7 70 64.3
BcaB02g08679 Brassica carinata HOM05D003169 ORTHO05D003700 3.8e-17 91.3 70 64.3
BcaC08g47495 Brassica carinata HOM05D003169 ORTHO05D003700 3.8e-17 91.3 70 64.3
A07p44430 Brassica napus HOM05D003169 ORTHO05D003700 3.8e-17 91.3 70 64.3
C06p53240 Brassica napus HOM05D003169 ORTHO05D003700 3.8e-17 91.3 70 64.3
BolC6t40342H Brassica oleracea HOM05D003169 ORTHO05D003700 3.8e-17 91.3 70 64.3
BraA07t31952Z Brassica rapa HOM05D003169 ORTHO05D003700 3.8e-17 91.3 70 64.3
HanXRQChr16g0505691 Helianthus annuus HOM05D003169 ORTHO05D003700 6.5e-17 90.5 70 64.3
Aqoxy1G01380 Aquilegia oxysepala HOM05D003169 ORTHO05D003700 8.5e-17 90.1 70 64.3
DCAR_016853 Daucus carota HOM05D003169 ORTHO05D003700 1.5e-16 89.4 70 60.0
Peaxi162Scf00166g00077 Petunia axillaris HOM05D003169 ORTHO05D003700 1.9e-16 89.0 70 61.4
Haze_18485 Corylus avellana HOM05D003169 ORTHO05D003700 5.5e-16 87.4 70 65.7
Sc06g0001640 Simmondsia chinensis HOM05D003169 ORTHO05D003700 5.5e-16 87.4 70 64.3
Rhsim02G0183500 Rhododendron simsii HOM05D003169 ORTHO05D003700 9.4e-16 86.7 70 60.0
Zm00001eb413950 Zea mays HOM05D003169 ORTHO05D003700 9.4e-16 86.7 70 57.1
Peaxi162Scf00420g00518 Petunia axillaris HOM05D003169 ORTHO05D003700 2.1e-15 85.5 70 58.6
TPR.G3619 Trifolium pratense HOM05D003169 ORTHO05D003700 2.1e-15 85.5 54 77.8
Os04g0609700 Oryza sativa ssp. japonica HOM05D003169 ORTHO05D003700 4.7e-15 84.3 70 55.7
DCAR_013705 Daucus carota HOM05D003169 ORTHO05D003700 6.1e-15 84.0 70 54.3
TPR.G7301 Trifolium pratense HOM05D003169 ORTHO05D003700 1.0e-14 83.2 55 76.4
ClCG02G018810 Citrullus lanatus HOM05D003169 ORTHO05D003700 1.8e-14 82.4 69 62.3
FAN16G1231 Fragaria x ananassa HOM05D003169 ORTHO05D003700 4.0e-14 81.3 54 74.1
Pp3c3_5410 Physcomitrium patens HOM05D003169 ORTHO05D003700 4.0e-14 81.3 70 58.6
Rhsim06G0106300 Rhododendron simsii HOM05D003169 ORTHO05D003700 5.2e-14 80.9 70 60.0
SMO358G0497 Selaginella moellendorffii HOM05D003169 ORTHO05D003700 6.8e-14 80.5 67 58.2
COL.COLO4_25001 Corchorus olitorius HOM05D003169 ORTHO05D003700 8.8e-14 80.1 54 68.5
TPR.G40025 Trifolium pratense HOM05D003169 ORTHO05D003700 1.2e-13 79.7 54 75.9
Zm00001eb430630 Zea mays HOM05D003169 ORTHO05D003700 1.5e-13 79.3 70 54.3
FAN11G1789 Fragaria x ananassa HOM05D003169 ORTHO05D003700 2.0e-13 79.0 64 68.8
Mapoly0153s0011 Marchantia polymorpha HOM05D003169 ORTHO05D003700 2.8e-12 75.1 70 57.1
DCAR_013706 Daucus carota HOM05D003169 ORTHO05D003700 4.1e-11 71.2 60 55.0
BcaB02g08681 Brassica carinata HOM05D003169 ORTHO05D003700 2.7e-10 68.6 54 61.1
AagrBONN_evm.TU.Sc2ySwM_228.2486 Anthoceros agrestis HOM05D003169 ORTHO05D003700 5.9e-10 67.4 70 51.4
SEGI_25392 Sequoiadendron giganteum HOM05D003169 ORTHO05D003700 6.1e-07 57.4 54 53.7


User provided reference genes

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