Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1899 Trifolium pratense HOM05D003639 ORTHO05D004246 7.9e-82 307.0 147 100.0
COL.COLO4_13929 Corchorus olitorius HOM05D003639 ORTHO05D004246 2.1e-18 96.3 156 39.7
Cpa.g.sc120.6 Carica papaya HOM05D003639 ORTHO05D004246 7.0e-14 81.3 70 60.0
MELO3C019779.2 Cucumis melo HOM05D003639 ORTHO05D004246 7.0e-14 81.3 128 40.6
CSS0037940 Camellia sinensis var. sinensis HOM05D003639 ORTHO05D004246 9.2e-14 80.9 128 39.8
RcHm_v2.0_Chr3g0484501 Rosa chinensis HOM05D003639 ORTHO05D004246 9.2e-14 80.9 121 46.3
HPP92_010189 Vanilla planifolia HOM05D003639 ORTHO05D004246 1.6e-13 80.1 81 51.9
Potri.016G042250 Populus trichocarpa HOM05D003639 ORTHO05D004246 1.0e-12 77.4 179 36.3
unitig_44.g31550 Utricularia gibba HOM05D003639 ORTHO05D004246 1.0e-12 77.4 113 38.9
THA.LOC104824426 Tarenaya hassleriana HOM05D003639 ORTHO05D004246 1.3e-12 77.0 77 57.1
Hma1.2p1_0338F.1_g129500 Hydrangea macrophylla HOM05D003639 ORTHO05D004246 1.1e-11 73.9 37 89.2
Solyc04g016510.3 Solanum lycopersicum HOM05D003639 ORTHO05D004246 1.1e-11 73.9 37 91.9
Sopen04g008580 Solanum pennellii HOM05D003639 ORTHO05D004246 1.1e-11 73.9 37 91.9
PGSC0003DMG400012703 Solanum tuberosum HOM05D003639 ORTHO05D004246 1.1e-11 73.9 37 91.9
HPP92_010210 Vanilla planifolia HOM05D000527 ORTHO05D000559 1.5e-11 73.6 68 54.4
Atru.chr6.1380 Acer truncatum HOM05D003639 ORTHO05D004246 3.3e-11 72.4 175 31.4
BcaC02g12784 Brassica carinata HOM05D003639 ORTHO05D004246 4.3e-11 72.0 81 49.4
C04p02760 Brassica napus HOM05D003639 ORTHO05D004246 4.3e-11 72.0 81 49.4
Thhalv10016457m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 4.3e-11 72.0 73 53.4
Sp4g23770 Schrenkiella parvula HOM05D003639 ORTHO05D004246 5.6e-11 71.6 79 50.6
A05p02320 Brassica napus HOM05D003639 ORTHO05D004246 7.3e-11 71.2 79 49.4
BraA05t19227Z Brassica rapa HOM05D003639 ORTHO05D004246 7.3e-11 71.2 79 49.4
Medtr3g045130 Medicago truncatula HOM05D003639 ORTHO05D004246 7.3e-11 71.2 33 97.0
A04p31660 Brassica napus HOM05D003639 ORTHO05D004246 9.5e-11 70.9 75 50.7
C04p69090 Brassica napus HOM05D003639 ORTHO05D004246 9.5e-11 70.9 75 50.7
BolC4t28406H Brassica oleracea HOM05D003639 ORTHO05D004246 9.5e-11 70.9 75 50.7
BraA04t18624Z Brassica rapa HOM05D003639 ORTHO05D004246 9.5e-11 70.9 75 50.7
Thhalv10000860m.g Eutrema salsugineum HOM05D003639 ORTHO05D004246 9.5e-11 70.9 78 51.3
AL3G43260 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 1.6e-10 70.1 191 29.3
Carub.0004s0611 Capsella rubella HOM05D003639 ORTHO05D004246 1.6e-10 70.1 81 50.6
CARHR136620 Cardamine hirsuta HOM05D003639 ORTHO05D004246 2.1e-10 69.7 79 50.6
unitig_578.g16292 Utricularia gibba HOM05D003639 ORTHO05D004246 2.1e-10 69.7 37 78.4
AL4G39590 Arabidopsis lyrata HOM05D003639 ORTHO05D004246 2.8e-10 69.3 81 48.1
BolC4t21916H Brassica oleracea HOM05D003639 ORTHO05D004246 3.6e-10 68.9 70 51.4
AT2G41500 Arabidopsis thaliana HOM05D003639 ORTHO05D004246 4.7e-10 68.6 80 48.8
Peaxi162Scf00130g00929 Petunia axillaris HOM05D003639 ORTHO05D004246 2.3e-09 66.2 37 83.8
Psat6g118240 Pisum sativum HOM05D003639 ORTHO05D004246 4.4e-08 62.0 41 70.7
FAN02G3905 Fragaria x ananassa HOM05D003639 ORTHO05D004246 9.8e-08 60.8 67 56.7
PRCOL_00003365 Prasinoderma coloniale HOM05D003639 ORTHO05D004246 1.9e-06 56.6 31 74.2


User provided reference genes

Program Settings