Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G18870 Trifolium pratense HOM05D004513 ORTHO05D005459 3.0e-51 204.9 104 100.0
TPR.G14657 Trifolium pratense HOM05D004513 ORTHO05D005459 4.8e-41 171.0 162 61.7
Medtr1g078300 Medicago truncatula HOM05D004513 ORTHO05D005459 1.8e-40 169.1 162 60.5
Ca_09968_v3 Cicer arietinum L. HOM05D004513 ORTHO05D005459 2.4e-40 168.7 162 60.5
Psat6g052200 Pisum sativum HOM05D004513 ORTHO05D005459 2.4e-40 168.7 162 60.5
Glyma.20G219500 Glycine max HOM05D004513 ORTHO05D005459 4.0e-40 167.9 162 60.5
QL01p052787 Quercus lobata HOM05D004513 ORTHO05D005459 2.6e-39 165.2 161 59.0
Glyma.10G170500 Glycine max HOM05D004513 ORTHO05D005459 7.6e-39 163.7 162 58.6
arahy.Tifrunner.gnm1.ann1.EZR5ZL Arachis hypogaea HOM05D004513 ORTHO05D005459 9.9e-39 163.3 160 58.8
arahy.Tifrunner.gnm1.ann1.VP1N9X Arachis hypogaea HOM05D004513 ORTHO05D005459 9.9e-39 163.3 160 58.8
Cpa.g.sc108.25 Carica papaya HOM05D004513 ORTHO05D005459 9.9e-39 163.3 162 58.6
Lj5g0024357 Lotus japonicus HOM05D004513 ORTHO05D005459 1.3e-38 162.9 161 58.4
QL11p018425 Quercus lobata HOM05D004513 ORTHO05D005459 1.3e-38 162.9 160 58.1
VMungo0720G2510 Vigna mungo HOM05D004513 ORTHO05D005459 1.3e-38 162.9 159 58.5
QL01p053899 Quercus lobata HOM05D004513 ORTHO05D005459 1.7e-38 162.5 161 58.4
Dinv18268 Davidia involucrata HOM05D004513 ORTHO05D005459 2.9e-38 161.8 162 58.0
Atru.chr2.210 Acer truncatum HOM05D004513 ORTHO05D005459 4.9e-38 161.0 160 58.1
Cfa002332 Carpinus fangiana HOM05D004513 ORTHO05D005459 6.4e-38 160.6 162 58.6
Ciclev10028809m.g Citrus clementina HOM05D004513 ORTHO05D005459 6.4e-38 160.6 160 58.1
Thecc.05G143300 Theobroma cacao HOM05D004513 ORTHO05D005459 6.4e-38 160.6 162 58.0
CiPaw.03G255300 Carya illinoinensis HOM05D004513 ORTHO05D005459 1.1e-37 159.8 162 57.4
Phvul.010G077556 Phaseolus vulgaris HOM05D004513 ORTHO05D005459 1.4e-37 159.5 158 57.6
CiPaw.04G179900 Carya illinoinensis HOM05D004513 ORTHO05D005459 4.2e-37 157.9 162 56.8
Lalb_Chr02g0149411 Lupinus albus HOM05D004513 ORTHO05D005459 4.2e-37 157.9 159 57.2
Potri.004G130400 Populus trichocarpa HOM05D004513 ORTHO05D005459 5.4e-37 157.5 162 56.8
Prupe.1G335400 Prunus persica HOM05D004513 ORTHO05D005459 5.4e-37 157.5 162 56.2
Actinidia23142 Actinidia chinensis HOM05D004513 ORTHO05D005459 7.1e-37 157.1 162 55.6
Eucgr.E04242 Eucalyptus grandis HOM05D004513 ORTHO05D005459 7.1e-37 157.1 159 57.2
PGR042G1535 Punica granatum HOM05D004513 ORTHO05D005459 7.1e-37 157.1 156 57.1
vmacro02855 Vaccinium macrocarpon HOM05D004513 ORTHO05D005459 7.1e-37 157.1 162 56.2
Gorai.003G086500 Gossypium raimondii HOM05D004513 ORTHO05D005459 9.3e-37 156.8 162 56.8
Lsat_1_v5_gn_9_15540 Lactuca sativa HOM05D004513 ORTHO05D005459 9.3e-37 156.8 161 55.9
Lalb_Chr21g0311401 Lupinus albus HOM05D004513 ORTHO05D005459 9.3e-37 156.8 159 57.2
CSS0042049 Camellia sinensis var. sinensis HOM05D004513 ORTHO05D005459 1.2e-36 156.4 162 55.6
Hma1.2p1_0161F.1_g071930 Hydrangea macrophylla HOM05D004513 ORTHO05D005459 1.2e-36 156.4 161 56.5
Rhsim13G0056500 Rhododendron simsii HOM05D004513 ORTHO05D005459 1.2e-36 156.4 162 55.6
RcHm_v2.0_Chr4g0442561 Rosa chinensis HOM05D004513 ORTHO05D005459 1.2e-36 156.4 162 56.2
ECA247G2996 Erigeron canadensis HOM05D004513 ORTHO05D005459 3.5e-36 154.8 161 55.3
FvH4_4g33330 Fragaria vesca HOM05D004513 ORTHO05D005459 3.5e-36 154.8 162 55.6
FAN12G0170 Fragaria x ananassa HOM05D004513 ORTHO05D005459 3.5e-36 154.8 162 55.6
FAN22G2142 Fragaria x ananassa HOM05D004513 ORTHO05D005459 3.5e-36 154.8 162 55.6
HanXRQChr01g0011511 Helianthus annuus HOM05D004513 ORTHO05D005459 3.5e-36 154.8 162 55.6
HanXRQChr08g0231101 Helianthus annuus HOM05D004513 ORTHO05D005459 3.5e-36 154.8 162 55.6
MD13G1018500 Malus domestica HOM05D004513 ORTHO05D005459 3.5e-36 154.8 162 54.9
Duzib128G1740 Durio zibethinus HOM05D004513 ORTHO05D005459 4.6e-36 154.5 162 56.2
Gohir.A02G125600 Gossypium hirsutum HOM05D004513 ORTHO05D005459 4.6e-36 154.5 162 56.2
Gohir.D03G073200 Gossypium hirsutum HOM05D004513 ORTHO05D005459 4.6e-36 154.5 162 56.2
TWI60G0129 Tripterygium wilfordii HOM05D004513 ORTHO05D005459 4.6e-36 154.5 156 56.4
Potri.017G075200 Populus trichocarpa HOM05D004513 ORTHO05D005459 6.0e-36 154.1 162 54.3
TAR633G2800 Trochodendron aralioides HOM05D004513 ORTHO05D005459 6.0e-36 154.1 162 54.9
FAN07G2840 Fragaria x ananassa HOM05D004513 ORTHO05D005459 1.0e-35 153.3 159 55.3
MSTRG.21281 Avicennia marina HOM05D004513 ORTHO05D005459 1.3e-35 152.9 160 54.4
FAN17G2198 Fragaria x ananassa HOM05D004513 ORTHO05D005459 1.3e-35 152.9 162 54.9
Lalb_Chr06g0168451 Lupinus albus HOM05D004513 ORTHO05D005459 1.3e-35 152.9 159 56.0
MD16G1016200 Malus domestica HOM05D004513 ORTHO05D005459 1.3e-35 152.9 162 54.9
COL.COLO4_34256 Corchorus olitorius HOM05D004513 ORTHO05D005459 1.8e-35 152.5 159 56.6
Duzib093G1552 Durio zibethinus HOM05D004513 ORTHO05D005459 1.8e-35 152.5 162 54.9
Manes.15G189000 Manihot esculenta HOM05D004513 ORTHO05D005459 1.8e-35 152.5 157 56.1
GSVIVG01026410001 Vitis vinifera HOM05D004513 ORTHO05D005459 2.3e-35 152.1 141 61.0
Migut.D00785 Erythranthe guttata HOM05D004513 ORTHO05D005459 3.0e-35 151.8 160 53.1
PSO063G0875 Papaver somniferum HOM05D004513 ORTHO05D005459 3.9e-35 151.4 160 53.1
ClCG08G000050 Citrullus lanatus HOM05D004513 ORTHO05D005459 6.7e-35 150.6 162 54.9
Hma1.2p1_1631F.1_g294590 Hydrangea macrophylla HOM05D004513 ORTHO05D005459 6.7e-35 150.6 158 55.7
TWI34G1431 Tripterygium wilfordii HOM05D004513 ORTHO05D005459 6.7e-35 150.6 156 55.1
Cc01_g15640 Coffea canephora HOM05D004513 ORTHO05D005459 8.7e-35 150.2 162 53.7
Nn4g24171 Nelumbo nucifera HOM05D004513 ORTHO05D005459 8.7e-35 150.2 160 55.0
CANSAT56G0122 Cannabis sativa HOM05D004513 ORTHO05D005459 1.1e-34 149.8 162 54.3
DCAR_018595 Daucus carota HOM05D004513 ORTHO05D005459 1.1e-34 149.8 162 53.1
Sabra17G0066700 Salix brachista HOM05D004513 ORTHO05D005459 1.1e-34 149.8 162 53.7
CAN.G3.18 Capsicum annuum HOM05D004513 ORTHO05D005459 1.5e-34 149.4 162 53.1
Nitab4.5_0000539g0060 Nicotiana tabacum HOM05D004513 ORTHO05D005459 1.5e-34 149.4 165 52.7
Solyc09g018730.4 Solanum lycopersicum HOM05D004513 ORTHO05D005459 1.5e-34 149.4 162 53.1
Sopen09g012270 Solanum pennellii HOM05D004513 ORTHO05D005459 1.5e-34 149.4 162 53.1
PGSC0003DMG400020283 Solanum tuberosum HOM05D004513 ORTHO05D005459 1.5e-34 149.4 162 53.1
MELO3C033520.2 Cucumis melo HOM05D004513 ORTHO05D005459 1.9e-34 149.1 161 54.7
Oeu020448.1 Olea europaea HOM05D004513 ORTHO05D005459 1.9e-34 149.1 158 54.4
Sed0025578 Sechium edule HOM05D004513 ORTHO05D005459 1.9e-34 149.1 162 54.9
CsaV3_5G040570 Cucumis sativus L. HOM05D004513 ORTHO05D005459 2.5e-34 148.7 162 54.3
Oeu023907.2 Olea europaea HOM05D004513 ORTHO05D005459 2.5e-34 148.7 160 54.4
Nitab4.5_0004383g0010 Nicotiana tabacum HOM05D004513 ORTHO05D005459 3.3e-34 148.3 162 53.1
PSO782G4739 Papaver somniferum HOM05D004513 ORTHO05D005459 3.3e-34 148.3 160 51.9
EL10Ac5g12923 Beta vulgaris HOM05D004513 ORTHO05D005459 4.3e-34 147.9 155 53.5
Peaxi162Scf00293g00517 Petunia axillaris HOM05D004513 ORTHO05D005459 4.3e-34 147.9 159 52.8
TAR636G2629 Trochodendron aralioides HOM05D004513 ORTHO05D005459 4.3e-34 147.9 159 52.8
Aqoxy7G03515 Aquilegia oxysepala HOM05D004513 ORTHO05D005459 5.6e-34 147.5 159 50.3
Nn3g18239 Nelumbo nucifera HOM05D004513 ORTHO05D005459 7.4e-34 147.1 160 53.8
arahy.Tifrunner.gnm1.ann1.JF6ZBS Arachis hypogaea HOM05D004513 ORTHO05D005459 9.6e-34 146.7 162 53.7
arahy.Tifrunner.gnm1.ann1.T1UJ1Q Arachis hypogaea HOM05D004513 ORTHO05D005459 9.6e-34 146.7 162 53.7
Hund11385 Selenicereus undatus HOM05D004513 ORTHO05D005459 9.6e-34 146.7 154 53.9
Ah.12g052580 Amaranthus hybridus HOM05D004513 ORTHO05D005459 2.1e-33 145.6 159 51.6
Lj2C1108G7 Lonicera japonica HOM05D004513 ORTHO05D005459 2.1e-33 145.6 158 53.2
HPP92_014787 Vanilla planifolia HOM05D004513 ORTHO05D005459 6.2e-33 144.1 159 51.6
Sc01g0010330 Simmondsia chinensis HOM05D004513 ORTHO05D005459 8.1e-33 143.7 160 52.5
Aqoxy4G00617 Aquilegia oxysepala HOM05D004513 ORTHO05D005459 1.1e-32 143.3 169 47.3
THA.LOC104822202 Tarenaya hassleriana HOM05D004513 ORTHO05D005459 1.1e-32 143.3 150 54.7
unitig_747.g21436 Utricularia gibba HOM05D004513 ORTHO05D005459 1.4e-32 142.9 160 50.6
CDE01G0780 Ceratophyllum demersum HOM05D004513 ORTHO05D005459 3.1e-32 141.7 159 52.2
AUR62010849 Chenopodium quinoa HOM05D004513 ORTHO05D005459 3.1e-32 141.7 162 51.2
AUR62019848 Chenopodium quinoa HOM05D004513 ORTHO05D005459 3.1e-32 141.7 162 51.2
Os02g0822200 Oryza sativa ssp. japonica HOM05D004513 ORTHO05D005459 3.1e-32 141.7 152 51.3
ATR0083G042 Amborella trichopoda HOM05D004513 ORTHO05D005459 2.6e-31 138.7 166 48.8
THA.LOC104805672 Tarenaya hassleriana HOM05D004513 ORTHO05D005459 2.6e-31 138.7 154 51.9
Nn3g20742 Nelumbo nucifera HOM05D004513 ORTHO05D005459 4.5e-31 137.9 197 45.2
ATR0736G018 Amborella trichopoda HOM05D004513 ORTHO05D005459 5.8e-31 137.5 166 48.8
Os02g0180100 Oryza sativa ssp. japonica HOM05D004513 ORTHO05D005459 5.8e-31 137.5 155 51.0
CANSAT78G0802 Cannabis sativa HOM05D004513 ORTHO05D005459 1.0e-30 136.7 160 50.6
THA.LOC104820932 Tarenaya hassleriana HOM05D004513 ORTHO05D005459 1.3e-30 136.3 159 49.1
AL2G22700 Arabidopsis lyrata HOM05D004513 ORTHO05D005459 2.2e-30 135.6 156 51.9
AT1G65650 Arabidopsis thaliana HOM05D004513 ORTHO05D005459 4.9e-30 134.4 156 51.3
Thhalv10018850m.g Eutrema salsugineum HOM05D004513 ORTHO05D005459 1.1e-29 133.3 155 51.0
CARHR057470 Cardamine hirsuta HOM05D004513 ORTHO05D005459 1.4e-29 132.9 155 50.3
Aa31LG2G2590 Aethionema arabicum HOM05D004513 ORTHO05D005459 2.5e-29 132.1 155 50.3
Carub.0002s1149 Capsella rubella HOM05D004513 ORTHO05D005459 3.2e-29 131.7 155 50.3
A07p32920 Brassica napus HOM05D004513 ORTHO05D005459 9.3e-29 130.2 155 49.0
BraA07t30919Z Brassica rapa HOM05D004513 ORTHO05D005459 9.3e-29 130.2 155 49.0
C06p39140 Brassica napus HOM05D004513 ORTHO05D005459 1.2e-28 129.8 155 49.0
BolC6t39007H Brassica oleracea HOM05D004513 ORTHO05D005459 1.2e-28 129.8 155 49.0
SMO117G0230 Selaginella moellendorffii HOM05D004513 ORTHO05D005459 1.2e-28 129.8 152 50.0
Zm00001eb259220 Zea mays HOM05D004513 ORTHO05D005459 2.7e-28 128.6 152 48.0
SHI08918 Sapria himalayana HOM05D004513 ORTHO05D005459 6.0e-28 127.5 150 48.7
Sp5g20610 Schrenkiella parvula HOM05D004513 ORTHO05D005459 8.7e-27 123.6 155 50.3
MD09G1273300 Malus domestica HOM05D004513 ORTHO05D005459 1.1e-26 123.2 145 52.4
SEGI_28826 Sequoiadendron giganteum HOM05D004513 ORTHO05D005459 1.1e-26 123.2 167 44.9
CARHR197000 Cardamine hirsuta HOM05D004513 ORTHO05D005459 1.5e-26 122.9 155 45.8
SEGI_08374 Sequoiadendron giganteum HOM05D004513 ORTHO05D005459 1.5e-26 122.9 167 44.3
Zm00001eb175830 Zea mays HOM05D004513 ORTHO05D005459 1.5e-26 122.9 154 45.5
Thhalv10014049m.g Eutrema salsugineum HOM05D004513 ORTHO05D005459 3.3e-26 121.7 157 44.6
A03p07670 Brassica napus HOM05D004513 ORTHO05D005459 9.6e-26 120.2 155 43.9
BraA03t10095Z Brassica rapa HOM05D004513 ORTHO05D005459 9.6e-26 120.2 155 43.9
Mapoly0070s0050 Marchantia polymorpha HOM05D004513 ORTHO05D005459 1.3e-25 119.8 167 44.3
Zm00001eb038900 Zea mays HOM05D004513 ORTHO05D005459 1.3e-25 119.8 152 46.7
C03p08910 Brassica napus HOM05D004513 ORTHO05D005459 2.1e-25 119.0 155 43.2
BolC3t13386H Brassica oleracea HOM05D004513 ORTHO05D005459 2.1e-25 119.0 155 43.2
AagrBONN_evm.TU.Sc2ySwM_344.4656 Anthoceros agrestis HOM05D004513 ORTHO05D005459 3.7e-25 118.2 163 42.9
Sp6g27850 Schrenkiella parvula HOM05D004513 ORTHO05D005459 3.7e-25 118.2 157 43.3
SGA_v2.0_scaffold77G25335 Striga asiatica HOM05D004513 ORTHO05D005459 6.2e-25 117.5 163 44.2
Carub.0006s1450 Capsella rubella HOM05D004513 ORTHO05D005459 1.4e-24 116.3 154 43.5
Pp3c16_12470 Physcomitrium patens HOM05D004513 ORTHO05D005459 5.3e-24 114.4 169 41.4
AL6G27210 Arabidopsis lyrata HOM05D004513 ORTHO05D005459 2.6e-23 112.1 152 42.8
Aa31LG11G13310 Aethionema arabicum HOM05D004513 ORTHO05D005459 5.8e-23 110.9 158 39.9
AT5G16310 Arabidopsis thaliana HOM05D004513 ORTHO05D005459 5.8e-23 110.9 152 42.1
HanXRQChr08g0231061 Helianthus annuus HOM05D004513 ORTHO05D005459 3.2e-21 105.1 113 55.8
BcaB03g15325 Brassica carinata HOM05D004513 ORTHO05D005459 1.8e-16 89.4 126 40.5
MD11G1242600 Malus domestica HOM05D004513 ORTHO05D005459 6.9e-16 87.4 53 83.0
MCO05G543 Micromonas commoda HOM05D004513 ORTHO05D005459 4.2e-13 78.2 71 53.5
CBR_g541 Chara braunii HOM05D004513 ORTHO05D005459 3.6e-12 75.1 166 30.7
Dinv23149 Davidia involucrata HOM05D004513 ORTHO05D005459 9.7e-10 67.0 46 69.6
PRCOL_00006972 Prasinoderma coloniale HOM05D004513 ORTHO05D005459 1.7e-09 66.2 78 38.5
Haze_26507 Corylus avellana HOM05D004513 ORTHO05D005459 1.4e-08 63.2 134 30.6
Cre06.g253300 Chlamydomonas reinhardtii HOM05D004513 ORTHO05D005459 2.0e-07 59.3 69 36.2
SGA_v2.0_scaffold158G37472 Striga asiatica HOM05D004513 ORTHO05D005459 3.8e-06 55.1 103 36.9
CDE12G0799 Ceratophyllum demersum HOM05D004513 ORTHO05D005459 5.0e-06 54.7 73 38.4
BcaB01g04992 Brassica carinata HOM05D004513 ORTHO05D005459 8.5e-06 53.9 36 66.7


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