Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17810 Trifolium pratense HOM05D005955 ORTHO05D007633 1.2e-147 526.6 281 100.0
Ca_27127_v3 Cicer arietinum L. HOM05D005955 ORTHO05D007633 9.0e-127 457.2 281 82.2
Medtr3g017610 Medicago truncatula HOM05D005955 ORTHO05D007633 4.9e-125 451.4 281 81.1
Psat5g219280 Pisum sativum HOM05D005955 ORTHO05D007633 6.0e-123 444.5 280 81.8
Glyma.11G154400 Glycine max HOM05D005955 ORTHO05D007633 3.2e-116 422.2 277 77.3
Lalb_Chr04g0264041 Lupinus albus HOM05D005955 ORTHO05D007633 3.9e-114 415.2 272 76.8
Phvul.005G029600 Phaseolus vulgaris HOM05D005955 ORTHO05D007633 1.3e-112 410.2 265 77.0
arahy.Tifrunner.gnm1.ann1.RGX0XE Arachis hypogaea HOM05D005955 ORTHO05D007633 1.4e-111 406.8 270 75.6
VMungo1080G1708 Vigna mungo HOM05D005955 ORTHO05D007633 1.1e-108 397.1 266 75.6
CiPaw.13G012200 Carya illinoinensis HOM05D005955 ORTHO05D007633 3.0e-106 389.0 278 71.9
TWI63G0596 Tripterygium wilfordii HOM05D005955 ORTHO05D007633 1.5e-105 386.7 267 72.7
QL04p014297 Quercus lobata HOM05D005955 ORTHO05D007633 2.5e-105 386.0 269 72.9
CSS0025918 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 1.1e-103 380.6 252 74.6
Haze_03068 Corylus avellana HOM05D005955 ORTHO05D007633 1.5e-102 376.7 275 71.6
GSVIVG01000659001 Vitis vinifera HOM05D005955 ORTHO05D007633 1.7e-101 373.2 264 70.8
Thecc.10G166400 Theobroma cacao HOM05D005955 ORTHO05D007633 6.5e-101 371.3 276 69.2
Manes.11G004000 Manihot esculenta HOM05D005955 ORTHO05D007633 7.2e-100 367.9 266 70.3
Peaxi162Scf01732g00026 Petunia axillaris HOM05D005955 ORTHO05D007633 1.6e-99 366.7 261 71.6
Potri.001G025601 Populus trichocarpa HOM05D005955 ORTHO05D007633 1.6e-99 366.7 266 69.5
Gohir.D04G014500 Gossypium hirsutum HOM05D005955 ORTHO05D007633 2.1e-99 366.3 258 72.1
Gorai.012G017000 Gossypium raimondii HOM05D005955 ORTHO05D007633 2.1e-99 366.3 271 69.0
Atru.chr12.1378 Acer truncatum HOM05D005955 ORTHO05D007633 4.6e-99 365.2 275 66.5
Eucgr.G03245 Eucalyptus grandis HOM05D005955 ORTHO05D007633 4.6e-99 365.2 275 68.7
Rhsim01G0123700 Rhododendron simsii HOM05D005955 ORTHO05D007633 6.1e-99 364.8 266 68.8
Ciclev10005678m.g Citrus clementina HOM05D005955 ORTHO05D007633 1.0e-98 364.0 274 67.9
MD02G1290300 Malus domestica HOM05D005955 ORTHO05D007633 1.0e-98 364.0 263 70.3
TAR369G0753 Trochodendron aralioides HOM05D005955 ORTHO05D007633 1.0e-98 364.0 272 66.9
Actinidia02255 Actinidia chinensis HOM05D005955 ORTHO05D007633 1.4e-98 363.6 260 70.0
THA.LOC104824190 Tarenaya hassleriana HOM05D005955 ORTHO05D007633 2.3e-98 362.8 256 70.3
vmacro12691 Vaccinium macrocarpon HOM05D005955 ORTHO05D007633 3.0e-98 362.5 275 67.6
Gohir.D04G013700 Gossypium hirsutum HOM05D005955 ORTHO05D007633 3.9e-98 362.1 272 68.0
Dinv09262 Davidia involucrata HOM05D005955 ORTHO05D007633 8.8e-98 360.9 255 72.2
Sopen11g001560 Solanum pennellii HOM05D005955 ORTHO05D007633 3.3e-97 359.0 259 68.7
FvH4_7g02750 Fragaria vesca HOM05D005955 ORTHO05D007633 4.4e-97 358.6 262 69.1
FAN06G1602 Fragaria x ananassa HOM05D005955 ORTHO05D007633 4.4e-97 358.6 262 69.1
Sp5g07940 Schrenkiella parvula HOM05D005955 ORTHO05D007633 4.4e-97 358.6 261 69.0
PGSC0003DMG401003979 Solanum tuberosum HOM05D005955 ORTHO05D007633 7.4e-97 357.8 259 68.7
CsaV3_5G036650 Cucumis sativus L. HOM05D005955 ORTHO05D007633 9.7e-97 357.5 259 68.3
FAN10G0293 Fragaria x ananassa HOM05D005955 ORTHO05D007633 9.7e-97 357.5 272 66.9
Sabra01G0018900 Salix brachista HOM05D005955 ORTHO05D007633 1.3e-96 357.1 266 67.7
Duzib128G0282 Durio zibethinus HOM05D005955 ORTHO05D007633 1.7e-96 356.7 275 68.4
Prupe.2G032200 Prunus persica HOM05D005955 ORTHO05D007633 1.7e-96 356.7 247 72.9
ClCG05G026720 Citrullus lanatus HOM05D005955 ORTHO05D007633 2.2e-96 356.3 259 68.3
Thhalv10010628m.g Eutrema salsugineum HOM05D005955 ORTHO05D007633 3.7e-96 355.5 250 70.0
Aa31sc434G20 Aethionema arabicum HOM05D005955 ORTHO05D007633 6.3e-96 354.8 273 65.6
BcaB02g08444 Brassica carinata HOM05D005955 ORTHO05D007633 1.1e-95 354.0 262 67.9
Hma1.2p1_1251F.1_g270440 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 2.4e-95 352.8 259 70.3
Solyc11g005590.1 Solanum lycopersicum HOM05D005955 ORTHO05D007633 3.1e-95 352.4 259 67.6
BolC8t50576H Brassica oleracea HOM05D005955 ORTHO05D007633 5.3e-95 351.7 265 67.5
Cfa010889 Carpinus fangiana HOM05D005955 ORTHO05D007633 5.3e-95 351.7 237 75.1
Gohir.A05G401400 Gossypium hirsutum HOM05D005955 ORTHO05D007633 5.3e-95 351.7 258 69.8
FAN03G1179 Fragaria x ananassa HOM05D005955 ORTHO05D007633 6.9e-95 351.3 266 67.3
Nitab4.5_0001681g0050 Nicotiana tabacum HOM05D005955 ORTHO05D007633 6.9e-95 351.3 260 68.8
RcHm_v2.0_Chr1g0322011 Rosa chinensis HOM05D005955 ORTHO05D007633 1.2e-94 350.5 274 66.8
Aqoxy2G00337 Aquilegia oxysepala HOM05D005955 ORTHO05D007633 1.5e-94 350.1 252 69.4
C08p29670 Brassica napus HOM05D005955 ORTHO05D007633 1.5e-94 350.1 265 67.5
Cpa.g.sc223.13 Carica papaya HOM05D005955 ORTHO05D007633 1.5e-94 350.1 275 66.2
Sed0001833 Sechium edule HOM05D005955 ORTHO05D007633 2.6e-94 349.4 245 68.6
AL5G35530 Arabidopsis lyrata HOM05D005955 ORTHO05D007633 3.4e-94 349.0 287 63.8
EL10Ac2g02824 Beta vulgaris HOM05D005955 ORTHO05D007633 1.0e-93 347.4 273 64.8
A04p05350 Brassica napus HOM05D005955 ORTHO05D007633 1.0e-93 347.4 265 66.4
Migut.N01830 Erythranthe guttata HOM05D005955 ORTHO05D007633 1.0e-93 347.4 269 68.4
Cc02_g29700 Coffea canephora HOM05D005955 ORTHO05D007633 1.3e-93 347.1 264 68.2
AT3G54480 Arabidopsis thaliana HOM05D005955 ORTHO05D007633 1.7e-93 346.7 284 63.4
A09p47410 Brassica napus HOM05D005955 ORTHO05D007633 1.7e-93 346.7 264 67.0
MSTRG.5061 Avicennia marina HOM05D005955 ORTHO05D007633 3.8e-93 345.5 265 67.5
Lj3g0013196 Lotus japonicus HOM05D005955 ORTHO05D007633 3.8e-93 345.5 281 65.1
MBI13_g36285_MAGBIO Magnolia biondii HOM05D005955 ORTHO05D007633 3.8e-93 345.5 263 65.0
BraA04t16235Z Brassica rapa HOM05D005955 ORTHO05D007633 5.0e-93 345.1 264 66.3
BcaB01g00190 Brassica carinata HOM05D005955 ORTHO05D007633 1.1e-92 344.0 263 66.9
CANSAT56G4499 Cannabis sativa HOM05D005955 ORTHO05D007633 1.9e-92 343.2 268 67.2
PGR031G3892 Punica granatum HOM05D005955 ORTHO05D007633 1.9e-92 343.2 258 67.8
Migut.O00720 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.5e-92 342.8 268 67.2
Carub.0005s2110 Capsella rubella HOM05D005955 ORTHO05D007633 4.2e-92 342.0 260 66.2
BcaC02g09066 Brassica carinata HOM05D005955 ORTHO05D007633 1.6e-91 340.1 267 64.4
C04p38040 Brassica napus HOM05D005955 ORTHO05D007633 1.6e-91 340.1 267 64.4
ECA248G0357 Erigeron canadensis HOM05D005955 ORTHO05D007633 2.7e-91 339.3 258 66.7
SGA_v2.0_scaffold232G43514 Striga asiatica HOM05D005955 ORTHO05D007633 3.6e-91 339.0 259 66.8
AUR62026845 Chenopodium quinoa HOM05D005955 ORTHO05D007633 8.8e-90 334.3 266 62.8
unitig_8.g4774 Utricularia gibba HOM05D005955 ORTHO05D007633 1.5e-89 333.6 243 66.3
HanXRQChr11g0341831 Helianthus annuus HOM05D005955 ORTHO05D007633 3.3e-89 332.4 248 66.9
CSS0041352 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D007633 2.2e-88 329.7 224 72.8
Nitab4.5_0000320g0120 Nicotiana tabacum HOM05D005955 ORTHO05D007633 2.6e-86 322.8 328 54.6
Hund15721 Selenicereus undatus HOM05D005955 ORTHO05D007633 6.5e-85 318.2 317 54.6
Lsat_1_v5_gn_1_114801 Lactuca sativa HOM05D005955 ORTHO05D007633 8.5e-85 317.8 249 65.5
HPP92_025011 Vanilla planifolia HOM05D005955 ORTHO05D007633 2.5e-84 316.2 256 62.1
ATR0075G002 Amborella trichopoda HOM05D005955 ORTHO05D007633 3.2e-84 315.8 260 60.8
CAN.G476.5 Capsicum annuum HOM05D005955 ORTHO05D007633 3.2e-84 315.8 223 70.4
PSO384G0859 Papaver somniferum HOM05D005955 ORTHO05D007633 3.2e-84 315.8 248 63.3
PSO339G4535 Papaver somniferum HOM05D005955 ORTHO05D007633 5.5e-84 315.1 279 58.8
Zm00001eb329830 Zea mays HOM05D005955 ORTHO05D007633 5.5e-84 315.1 244 61.5
COL.COLO4_21458 Corchorus olitorius HOM05D005955 ORTHO05D007633 7.2e-84 314.7 223 70.0
MELO3C012462.2 Cucumis melo HOM05D005955 ORTHO05D007633 7.2e-84 314.7 230 66.5
Sc10g0004360 Simmondsia chinensis HOM05D005955 ORTHO05D007633 2.7e-83 312.8 225 67.6
Ah.10g030640 Amaranthus hybridus HOM05D000390 ORTHO05D000577 5.2e-82 308.5 254 62.6
Oeu015683.2 Olea europaea HOM05D005955 ORTHO05D007633 1.5e-81 307.0 223 70.0
Lj7A580T60 Lonicera japonica HOM05D005955 ORTHO05D007633 2.0e-81 306.6 227 68.3
DCAR_031830 Daucus carota HOM05D005955 ORTHO05D007633 4.4e-81 305.4 223 67.7
arahy.Tifrunner.gnm1.ann1.NJCB22 Arachis hypogaea HOM05D005955 ORTHO05D007633 1.1e-79 300.8 349 52.1
Nn2g14899 Nelumbo nucifera HOM05D005955 ORTHO05D007633 7.0e-79 298.1 212 68.9
Hma1.2p1_1251F.1_g270450 Hydrangea macrophylla HOM05D005955 ORTHO05D007633 5.0e-77 292.0 214 71.0
Os07g0659700 Oryza sativa ssp. japonica HOM05D005955 ORTHO05D007633 2.5e-68 263.1 212 60.8
Atru.chr12.1174 Acer truncatum HOM05D005955 ORTHO05D007633 6.3e-64 248.4 189 67.2
SEGI_28535 Sequoiadendron giganteum HOM05D005955 ORTHO05D007633 8.3e-64 248.1 239 54.4
Dinv09283 Davidia involucrata HOM05D005955 ORTHO05D007633 6.6e-61 238.4 153 79.1
AagrBONN_evm.TU.Sc2ySwM_344.4523 Anthoceros agrestis HOM05D005955 ORTHO05D007633 7.3e-60 235.0 245 49.0
SMO172G0212 Selaginella moellendorffii HOM05D005955 ORTHO05D007633 1.6e-54 217.2 261 43.7
Pp3c5_2560 Physcomitrium patens HOM05D005955 ORTHO05D007633 1.1e-52 211.1 253 47.4
CDE12G0962 Ceratophyllum demersum HOM05D005955 ORTHO05D007633 2.1e-51 206.8 166 61.4
Manes.08G167250 Manihot esculenta HOM05D005955 ORTHO05D007633 2.1e-51 206.8 134 76.1
BolC8t50572H Brassica oleracea HOM05D005955 ORTHO05D007633 1.5e-49 200.7 144 71.5
BraA09t40201Z Brassica rapa HOM05D005955 ORTHO05D007633 5.8e-49 198.7 143 71.3
BolC8t50570H Brassica oleracea HOM05D005955 ORTHO05D007633 7.5e-49 198.4 144 70.8
AUR62037202 Chenopodium quinoa HOM05D005955 ORTHO05D007633 7.5e-49 198.4 135 69.6
CBR_g30624 Chara braunii HOM05D005955 ORTHO05D007633 1.6e-46 190.7 266 41.4
Manes.11G001251 Manihot esculenta HOM05D005955 ORTHO05D007633 6.2e-43 178.7 115 77.4
Ciclev10002701m.g Citrus clementina HOM05D005955 ORTHO05D007633 1.8e-42 177.2 118 78.8
CARHR164380 Cardamine hirsuta HOM05D005955 ORTHO05D007633 1.4e-39 167.5 122 70.5
AUR62037203 Chenopodium quinoa HOM05D005955 ORTHO05D007633 2.4e-34 150.2 119 61.3
Psat7g193960 Pisum sativum HOM05D005955 ORTHO05D007633 2.4e-34 150.2 110 70.9
C08p29620 Brassica napus HOM05D005955 ORTHO05D007633 6.4e-32 142.1 79 84.8
Nn8g40481 Nelumbo nucifera HOM05D005955 ORTHO05D007633 1.1e-26 124.8 84 63.1
CANSAT01G1797 Cannabis sativa HOM05D005955 ORTHO05D007633 4.0e-26 122.9 108 57.4
TPR.G7208 Trifolium pratense HOM05D005955 ORTHO05D007633 3.9e-21 106.3 47 100.0
Migut.N01795 Erythranthe guttata HOM05D005955 ORTHO05D007633 2.4e-15 87.0 131 45.0
BcaC08g45413 Brassica carinata HOM05D005955 ORTHO05D007633 1.9e-12 77.4 112 46.4
BcaB05g22681 Brassica carinata HOM05D005955 ORTHO05D007633 1.6e-11 74.3 112 45.5
Lsat_1_v5_gn_2_43661 Lactuca sativa HOM05D005955 ORTHO05D033925 1.6e-06 57.8 37 70.3
CSS0050126 Camellia sinensis var. sinensis HOM05D005955 ORTHO05D033925 6.0e-06 55.8 29 86.2


User provided reference genes

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