Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17447 Trifolium pratense HOM05D006113 ORTHO05D007828 1.3e-137 493.0 255 100.0
Psat2g173560 Pisum sativum HOM05D006113 ORTHO05D007828 1.1e-91 340.5 243 73.3
Medtr5g014290 Medicago truncatula HOM05D006113 ORTHO05D007828 4.2e-91 338.6 251 69.7
Lj2g0019507 Lotus japonicus HOM05D006113 ORTHO05D007828 1.6e-82 310.1 253 63.2
Lalb_Chr05g0214021 Lupinus albus HOM05D006113 ORTHO05D007828 1.4e-78 297.0 256 58.6
CANSAT21G0754 Cannabis sativa HOM05D006113 ORTHO05D007828 4.0e-73 278.9 258 57.8
Potri.001G144500 Populus trichocarpa HOM05D006113 ORTHO05D007828 5.2e-73 278.5 253 57.3
MELO3C003389.2 Cucumis melo HOM05D006113 ORTHO05D007828 6.8e-73 278.1 258 56.6
CsaV3_3G049370 Cucumis sativus L. HOM05D006113 ORTHO05D007828 6.8e-73 278.1 259 56.4
Sabra01G0112900 Salix brachista HOM05D006113 ORTHO05D007828 8.9e-73 277.7 253 56.5
vmacro14161 Vaccinium macrocarpon HOM05D006113 ORTHO05D007828 2.0e-72 276.6 256 59.0
Potri.003G089700 Populus trichocarpa HOM05D006113 ORTHO05D007828 3.4e-72 275.8 253 56.9
ClCG09G012180 Citrullus lanatus HOM05D006113 ORTHO05D007828 5.7e-72 275.0 256 56.6
Eucgr.E00301 Eucalyptus grandis HOM05D006113 ORTHO05D007828 4.9e-71 271.9 258 56.2
Atru.chr6.1754 Acer truncatum HOM05D006113 ORTHO05D007828 6.3e-71 271.6 255 56.9
COL.COLO4_17073 Corchorus olitorius HOM05D006113 ORTHO05D007828 1.4e-70 270.4 258 55.8
arahy.Tifrunner.gnm1.ann1.C9Y7N1 Arachis hypogaea HOM05D006113 ORTHO05D007828 1.8e-70 270.0 255 57.3
arahy.Tifrunner.gnm1.ann1.LSM77P Arachis hypogaea HOM05D006113 ORTHO05D007828 1.8e-70 270.0 255 57.3
Cfa012411 Carpinus fangiana HOM05D006113 ORTHO05D007828 1.8e-70 270.0 257 56.8
Sed0027774 Sechium edule HOM05D006113 ORTHO05D007828 1.8e-70 270.0 259 55.6
Thecc.03G231000 Theobroma cacao HOM05D006113 ORTHO05D007828 1.2e-69 267.3 255 55.3
HanXRQChr17g0535731 Helianthus annuus HOM05D006113 ORTHO05D007828 1.6e-69 266.9 253 54.5
Ciclev10031360m.g Citrus clementina HOM05D006113 ORTHO05D007828 2.7e-69 266.2 259 55.6
QL12p006235 Quercus lobata HOM05D006113 ORTHO05D007828 2.7e-69 266.2 249 58.2
Rhsim07G0124800 Rhododendron simsii HOM05D006113 ORTHO05D007828 2.7e-69 266.2 257 56.4
Dinv28932 Davidia involucrata HOM05D006113 ORTHO05D007828 3.5e-69 265.8 258 56.2
Haze_08267 Corylus avellana HOM05D006113 ORTHO05D007828 4.5e-69 265.4 248 58.1
TAR371G0010 Trochodendron aralioides HOM05D006113 ORTHO05D007828 2.9e-68 262.7 257 54.9
CiPaw.11G091200 Carya illinoinensis HOM05D006113 ORTHO05D007828 5.0e-68 261.9 258 55.0
Gorai.004G186900 Gossypium raimondii HOM05D006113 ORTHO05D007828 6.6e-68 261.5 257 54.5
Gohir.D08G178600 Gossypium hirsutum HOM05D006113 ORTHO05D007828 1.1e-67 260.8 257 53.7
Cc08_g02430 Coffea canephora HOM05D006113 ORTHO05D007828 2.5e-67 259.6 255 54.5
Gohir.A08G158300 Gossypium hirsutum HOM05D006113 ORTHO05D007828 3.3e-67 259.2 256 54.3
CSS0019238 Camellia sinensis var. sinensis HOM05D006113 ORTHO05D007828 4.3e-67 258.8 257 54.5
CSS0023186 Camellia sinensis var. sinensis HOM05D006113 ORTHO05D007828 4.3e-67 258.8 257 54.5
Oeu062745.2 Olea europaea HOM05D006113 ORTHO05D007828 4.3e-67 258.8 258 53.5
Duzib205G1867 Durio zibethinus HOM05D006113 ORTHO05D007828 7.3e-67 258.1 256 54.3
HanXRQChr06g0167341 Helianthus annuus HOM05D006113 ORTHO05D007828 1.6e-66 256.9 257 52.5
Lsat_1_v5_gn_3_16601 Lactuca sativa HOM05D006113 ORTHO05D007828 1.6e-66 256.9 255 52.9
Manes.05G117026 Manihot esculenta HOM05D006113 ORTHO05D007828 1.6e-66 256.9 255 52.9
TWI60G1370 Tripterygium wilfordii HOM05D006113 ORTHO05D007828 2.8e-66 256.1 256 53.5
Hund14417 Selenicereus undatus HOM05D006113 ORTHO05D007828 3.6e-66 255.8 260 55.4
EL10Ac1g02288 Beta vulgaris HOM05D006113 ORTHO05D007828 1.0e-65 254.2 257 53.7
PGR042G1735 Punica granatum HOM05D006113 ORTHO05D007828 1.0e-65 254.2 266 50.8
Prupe.1G552500 Prunus persica HOM05D006113 ORTHO05D007828 1.8e-65 253.4 259 54.1
ECA246G3200 Erigeron canadensis HOM05D006113 ORTHO05D007828 2.3e-65 253.1 256 50.8
MD09G1232600 Malus domestica HOM05D006113 ORTHO05D007828 2.3e-65 253.1 260 54.2
CSS0010269 Camellia sinensis var. sinensis HOM05D006113 ORTHO05D007828 3.1e-65 252.7 259 54.1
DCAR_008285 Daucus carota HOM05D006113 ORTHO05D007828 4.0e-65 252.3 255 54.5
Ah.12g054610 Amaranthus hybridus HOM05D006113 ORTHO05D007828 5.2e-65 251.9 256 51.6
GSVIVG01013180001 Vitis vinifera HOM05D006113 ORTHO05D007828 5.2e-65 251.9 258 51.9
AUR62018751 Chenopodium quinoa HOM05D006113 ORTHO05D007828 8.9e-65 251.1 249 55.0
TWI81G0082 Tripterygium wilfordii HOM05D006113 ORTHO05D007828 1.2e-64 250.8 256 52.0
SGA_v2.0_scaffold385G50460 Striga asiatica HOM05D006113 ORTHO05D007828 1.5e-64 250.4 257 51.0
MSTRG.12007 Avicennia marina HOM05D006113 ORTHO05D007828 3.4e-64 249.2 258 51.6
Ca_24644_v3 Cicer arietinum L. HOM05D006113 ORTHO05D007828 7.5e-64 248.1 164 76.2
RcHm_v2.0_Chr6g0269051 Rosa chinensis HOM05D006113 ORTHO05D007828 1.3e-63 247.3 258 51.6
Cpa.g.sc90.55 Carica papaya HOM05D006113 ORTHO05D007828 1.7e-63 246.9 253 51.4
Nitab4.5_0000535g0010 Nicotiana tabacum HOM05D006113 ORTHO05D007828 1.7e-63 246.9 246 56.5
SalBow1G7584 Salvia bowleyana HOM05D006113 ORTHO05D007828 8.3e-63 244.6 257 51.8
AUR62007248 Chenopodium quinoa HOM05D006113 ORTHO05D007828 1.4e-62 243.8 244 52.9
FvH4_6g31710 Fragaria vesca HOM05D006113 ORTHO05D007828 1.9e-62 243.4 255 50.6
Nn3g17324 Nelumbo nucifera HOM05D006113 ORTHO05D007828 4.1e-62 242.3 260 48.1
Sopen08g002980 Solanum pennellii HOM05D006113 ORTHO05D007828 7.0e-62 241.5 248 53.2
Migut.E01131 Erythranthe guttata HOM05D006113 ORTHO05D007828 9.2e-62 241.1 263 48.7
FAN02G2000 Fragaria x ananassa HOM05D006113 ORTHO05D007828 1.6e-61 240.4 255 49.8
Sc22g0001480 Simmondsia chinensis HOM05D006113 ORTHO05D007828 1.6e-61 240.4 262 53.1
FAN09G0007 Fragaria x ananassa HOM05D006113 ORTHO05D007828 2.7e-61 239.6 255 50.2
unitig_52.g17240 Utricularia gibba HOM05D006113 ORTHO05D007828 3.5e-61 239.2 256 48.8
THA.LOC104814434 Tarenaya hassleriana HOM05D006113 ORTHO05D007828 1.0e-60 237.7 261 50.2
PGSC0003DMG400020501 Solanum tuberosum HOM05D006113 ORTHO05D007828 1.3e-60 237.3 248 52.4
FAN05G0306 Fragaria x ananassa HOM05D006113 ORTHO05D007828 3.0e-60 236.1 255 49.4
PSO017G4443 Papaver somniferum HOM05D006113 ORTHO05D007828 3.0e-60 236.1 258 49.6
Lj8A291G57 Lonicera japonica HOM05D006113 ORTHO05D007828 3.9e-60 235.7 258 50.0
Glyma.11G042400 Glycine max HOM05D006113 ORTHO05D007828 6.6e-60 235.0 249 51.8
PSO478G3605 Papaver somniferum HOM05D006113 ORTHO05D007828 8.6e-60 234.6 258 49.2
THA.LOC104807962 Tarenaya hassleriana HOM05D006113 ORTHO05D007828 1.1e-59 234.2 260 48.5
Carub.0001s3091 Capsella rubella HOM05D006113 ORTHO05D007828 1.5e-59 233.8 256 50.0
AL1G46750 Arabidopsis lyrata HOM05D006113 ORTHO05D007828 1.9e-59 233.4 257 48.6
BcaB03g13726 Brassica carinata HOM05D006113 ORTHO05D007828 3.3e-59 232.6 258 48.8
A05p24790 Brassica napus HOM05D006113 ORTHO05D007828 7.3e-59 231.5 254 50.4
BolC5t32582H Brassica oleracea HOM05D006113 ORTHO05D007828 7.3e-59 231.5 261 49.4
BraA05t21362Z Brassica rapa HOM05D006113 ORTHO05D007828 7.3e-59 231.5 254 50.4
CAN.G845.35 Capsicum annuum HOM05D006113 ORTHO05D007828 7.3e-59 231.5 249 49.8
Aa31LG2G13450 Aethionema arabicum HOM05D006113 ORTHO05D007828 2.1e-58 229.9 259 47.1
AT1G32500 Arabidopsis thaliana HOM05D006113 ORTHO05D007828 2.8e-58 229.6 256 48.8
CARHR031950 Cardamine hirsuta HOM05D006113 ORTHO05D007828 2.8e-58 229.6 262 47.7
Peaxi162Scf00102g00639 Petunia axillaris HOM05D006113 ORTHO05D007828 2.8e-58 229.6 247 52.6
Sp1g28400 Schrenkiella parvula HOM05D006113 ORTHO05D007828 2.8e-58 229.6 242 50.8
BcaC05g27850 Brassica carinata HOM05D006113 ORTHO05D007828 6.2e-58 228.4 261 48.7
C05p38480 Brassica napus HOM05D006113 ORTHO05D007828 6.2e-58 228.4 261 48.7
MBI18_g17018_MAGBIO Magnolia biondii HOM05D006113 ORTHO05D007828 6.2e-58 228.4 260 48.1
Thhalv10007401m.g Eutrema salsugineum HOM05D006113 ORTHO05D007828 1.1e-57 227.6 262 47.7
Phvul.002G006200 Phaseolus vulgaris HOM05D006113 ORTHO05D007828 5.2e-57 225.3 258 50.4
Aqoxy3G00478 Aquilegia oxysepala HOM05D006113 ORTHO05D007828 2.9e-55 219.5 258 48.4
VMungo1215G1026 Vigna mungo HOM05D006113 ORTHO05D007828 3.2e-54 216.1 258 48.1
Nitab4.5_0000804g0060 Nicotiana tabacum HOM05D006113 ORTHO05D007828 6.0e-53 211.8 215 53.5
PSO478G2563 Papaver somniferum HOM05D006113 ORTHO05D007828 4.3e-51 205.7 260 43.8
BcaC05g27849 Brassica carinata HOM05D006113 ORTHO05D007828 1.5e-48 197.2 230 47.4
HPP92_003349 Vanilla planifolia HOM05D006113 ORTHO05D007828 1.9e-46 190.3 257 42.8
Solyc08g007010.4 Solanum lycopersicum HOM05D006113 ORTHO05D007828 4.4e-40 169.1 161 54.7
Mapoly0097s0089 Marchantia polymorpha HOM05D006113 ORTHO05D007828 9.9e-40 167.9 262 38.2
SEGI_13135 Sequoiadendron giganteum HOM05D006113 ORTHO05D007828 9.9e-40 167.9 258 40.3
PSO782G1575 Papaver somniferum HOM05D006113 ORTHO05D007828 3.8e-39 166.0 264 39.4
Os01g0127300 Oryza sativa ssp. japonica HOM05D006113 ORTHO05D007828 3.5e-37 159.5 250 42.8
Zm00001eb335220 Zea mays HOM05D006113 ORTHO05D007828 1.1e-35 154.5 250 41.2
Pp3c12_11290 Physcomitrium patens HOM05D006113 ORTHO05D007828 2.9e-31 139.8 274 32.8
AagrBONN_evm.TU.Sc2ySwM_228.790 Anthoceros agrestis HOM05D006113 ORTHO05D007828 5.4e-30 135.6 266 34.6
SMO356G0179 Selaginella moellendorffii HOM05D006113 ORTHO05D007828 1.7e-28 130.6 260 34.6
CBR_g5705 Chara braunii HOM05D006113 ORTHO05D007828 3.9e-28 129.4 266 35.3
Glyma.01G199500 Glycine max HOM05D006113 ORTHO05D007828 3.3e-27 126.3 136 50.0
CBR_g5706 Chara braunii HOM05D006113 ORTHO05D007828 4.3e-27 125.9 254 35.4
MCO11G391 Micromonas commoda HOM05D006113 ORTHO05D007828 2.3e-20 103.6 244 32.8
PRCOL_00003470 Prasinoderma coloniale HOM05D006113 ORTHO05D007828 3.8e-15 86.3 254 29.9
Cre12.g513950 Chlamydomonas reinhardtii HOM05D006113 ORTHO05D007828 1.1e-14 84.7 246 28.0
MELO3C003388.2 Cucumis melo HOM05D006113 ORTHO05D007828 1.1e-14 84.7 97 47.4
AUR62019423 Chenopodium quinoa HOM05D006113 ORTHO05D031674 9.3e-14 81.6 75 56.0
ATR0680G232 Amborella trichopoda HOM05D006113 ORTHO05D007828 6.0e-13 79.0 82 47.6
Pp3c4_5260 Physcomitrium patens HOM05D006113 ORTHO05D007828 2.3e-12 77.0 210 27.1


User provided reference genes

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