Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 9.8e-178 626.7 322 100.0
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 3.4e-162 575.1 318 92.5
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 5.4e-160 567.8 319 91.2
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 3.8e-153 545.0 310 91.0
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 2.2e-137 492.7 309 82.8
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 4.3e-133 478.4 308 80.8
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 4.3e-133 478.4 308 81.2
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 1.6e-132 476.5 315 79.7
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 4.0e-131 471.9 310 80.6
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 5.3e-131 471.5 310 81.0
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 3.9e-126 455.3 273 85.0
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 8.2e-124 447.6 291 80.1
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 1.8e-123 446.4 291 79.7
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 6.9e-123 444.5 313 73.8
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 5.8e-122 441.4 298 76.8
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 2.2e-121 439.5 296 77.0
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 2.1e-119 433.0 309 74.4
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 3.5e-119 432.2 316 73.4
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 1.0e-118 430.6 262 83.2
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 3.9e-118 428.7 293 76.1
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 5.1e-118 428.3 310 72.9
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 6.7e-118 427.9 262 82.8
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 6.7e-118 427.9 303 74.6
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 3.3e-117 425.6 280 78.6
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 4.3e-117 425.2 261 82.4
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 5.7e-117 424.9 311 73.3
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 5.7e-117 424.9 265 83.0
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 9.7e-117 424.1 293 75.1
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 2.8e-116 422.5 313 71.6
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 4.8e-116 421.8 279 79.9
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 6.3e-116 421.4 262 82.1
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 3.1e-115 419.1 314 70.4
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 6.9e-115 417.9 314 71.7
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 9.0e-115 417.5 280 76.4
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 1.2e-114 417.2 293 74.4
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 1.2e-114 417.2 255 81.6
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 5.9e-114 414.8 322 69.3
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 5.9e-114 414.8 255 82.7
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 7.7e-114 414.5 283 75.6
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 1.3e-113 413.7 289 73.7
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 2.2e-113 412.9 270 77.8
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 2.2e-113 412.9 263 79.1
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 3.8e-113 412.1 273 77.7
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 8.5e-113 411.0 286 75.2
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 1.1e-112 410.6 255 81.2
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 5.5e-112 408.3 280 75.0
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 9.4e-112 407.5 260 78.5
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 9.4e-112 407.5 262 80.2
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 3.6e-111 405.6 272 77.2
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 7.9e-111 404.4 285 73.3
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 7.9e-111 404.4 257 80.5
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 1.8e-110 403.3 281 74.7
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 3.0e-110 402.5 261 77.8
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 6.7e-110 401.4 265 77.0
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 8.8e-110 401.0 282 72.3
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 7.4e-109 397.9 269 75.1
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 2.2e-108 396.4 257 78.6
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 2.2e-108 396.4 260 76.2
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 2.8e-108 396.0 290 71.7
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 2.8e-108 396.0 257 78.2
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 2.8e-108 396.0 264 74.2
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 4.1e-107 392.1 258 77.9
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 1.2e-106 390.6 260 73.8
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 2.0e-106 389.8 239 81.6
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 2.0e-106 389.8 265 73.2
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 2.0e-106 389.8 259 77.2
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 2.0e-106 389.8 261 75.1
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 2.0e-106 389.8 259 77.2
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 4.2e-104 382.1 265 74.7
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 4.7e-103 378.6 269 74.7
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 3.0e-102 375.9 271 76.0
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 1.7e-100 370.2 240 78.3
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 2.2e-100 369.8 289 68.2
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 2.8e-100 369.4 244 76.2
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 4.8e-100 368.6 282 68.4
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 2.4e-99 366.3 288 68.4
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 2.4e-99 366.3 298 66.8
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 3.1e-99 365.9 288 67.7
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 3.1e-99 365.9 298 66.4
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 3.1e-99 365.9 298 66.4
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 3.1e-99 365.9 285 67.7
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 4.1e-99 365.5 288 67.7
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 9.1e-99 364.4 288 67.4
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 9.1e-99 364.4 288 67.4
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 1.2e-98 364.0 270 70.7
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 1.6e-98 363.6 229 80.3
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 3.5e-98 362.5 219 84.0
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 1.0e-97 360.9 285 67.0
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 1.0e-97 360.9 289 67.5
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 2.2e-97 359.8 284 66.2
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 8.5e-97 357.8 289 67.1
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 2.2e-92 343.2 213 81.2
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 1.2e-90 337.4 279 62.0
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 2.7e-90 336.3 220 78.2
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 3.5e-90 335.9 260 64.2
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 3.2e-88 329.3 336 56.5
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 4.2e-88 328.9 298 62.1
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 2.1e-87 326.6 229 73.8
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 3.6e-87 325.9 237 73.8
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 4.0e-86 322.4 231 72.7
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 5.2e-86 322.0 252 65.5
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 8.8e-86 321.2 229 72.5
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 1.1e-83 314.3 243 68.7
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 7.0e-83 311.6 253 62.1
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 1.5e-80 303.9 220 72.3
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 1.5e-80 303.9 244 62.3
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 6.1e-79 298.5 178 84.8
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 6.3e-76 288.5 241 63.1
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 7.3e-72 275.0 302 55.3
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 4.4e-69 265.8 240 57.5
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 6.4e-68 261.9 177 76.8
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 7.8e-66 255.0 244 57.8
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 9.5e-56 221.5 300 45.3
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 5.2e-54 215.7 129 83.7
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 8.4e-44 181.8 112 80.4
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 2.1e-42 177.2 116 72.4
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 2.0e-37 160.6 116 67.2
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 6.0e-34 149.1 95 74.7
Hma1.2p1_0161F.1_g071660 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 9.0e-30 135.2 88 76.1
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 7.6e-29 132.1 86 76.7
CDE04G0367 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 6.7e-25 119.0 86 68.6
VMungo1383G2211 Vigna mungo HOM05D006330 ORTHO05D434633 1.9e-11 74.3 44 79.5
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 1.3e-09 68.2 64 60.9
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 5.7e-08 62.8 46 67.4


User provided reference genes

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