Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 7.2e-245 850.1 426 100.0
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 1.1e-224 783.1 426 90.4
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 6.0e-223 777.3 420 91.7
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 1.1e-216 756.5 426 87.3
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 3.2e-216 755.0 428 86.7
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 1.6e-215 752.7 426 86.6
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 6.6e-214 747.3 426 86.6
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 1.5e-210 736.1 429 84.6
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 9.2e-208 726.9 412 86.7
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 9.0e-195 683.7 427 80.3
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 2.8e-188 662.1 427 77.8
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 8.1e-188 660.6 418 77.8
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 8.1e-188 660.6 428 76.6
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 4.0e-187 658.3 425 76.7
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 2.6e-186 655.6 427 77.0
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 3.8e-185 651.7 429 76.0
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 6.4e-185 651.0 423 75.4
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 1.1e-184 650.2 428 76.4
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.4e-184 649.8 423 75.4
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.9e-184 649.4 430 74.2
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 3.2e-184 648.7 434 73.3
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 4.2e-184 648.3 427 74.7
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 9.3e-184 647.1 430 74.2
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 1.2e-183 646.7 430 74.4
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 2.1e-183 646.0 422 74.4
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 7.9e-183 644.0 418 76.3
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 6.7e-182 641.0 430 74.2
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.3e-181 638.6 418 75.6
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 4.3e-181 638.3 430 74.0
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 1.3e-180 636.7 427 73.3
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 1.3e-180 636.7 427 73.5
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 1.6e-180 636.3 418 73.9
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 2.1e-180 636.0 418 75.4
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 4.8e-180 634.8 427 73.3
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 1.8e-179 632.9 428 73.4
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 4.0e-179 631.7 458 68.8
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 5.3e-179 631.3 427 72.8
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 1.5e-178 629.8 421 74.1
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 3.4e-178 628.6 421 74.3
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 5.8e-178 627.9 420 73.8
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 5.8e-178 627.9 420 73.8
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 1.7e-177 626.3 430 70.5
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 1.1e-176 623.6 427 72.4
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 4.2e-176 621.7 436 72.9
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 7.1e-176 620.9 418 73.0
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 6.0e-175 617.8 424 71.7
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 7.9e-175 617.5 418 72.2
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 1.0e-174 617.1 422 73.5
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 5.1e-174 614.8 418 71.5
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 6.7e-174 614.4 427 71.9
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 8.7e-174 614.0 431 71.0
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 1.5e-173 613.2 422 70.9
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 1.3e-172 610.1 422 72.7
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 1.6e-172 609.8 422 72.7
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 1.6e-172 609.8 422 72.7
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 2.1e-172 609.4 418 71.8
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 4.8e-172 608.2 422 73.0
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 6.2e-172 607.8 420 71.2
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 1.1e-171 607.1 422 72.3
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 1.4e-171 606.7 428 70.6
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 3.1e-171 605.5 421 70.5
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 9.0e-171 604.0 421 70.5
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 2.6e-170 602.4 421 69.8
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 7.6e-170 600.9 419 70.9
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 1.3e-169 600.1 421 72.0
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 1.7e-169 599.7 431 70.5
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 2.2e-169 599.4 421 72.2
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 3.8e-169 598.6 424 68.9
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 3.8e-169 598.6 430 70.0
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 1.4e-168 596.7 421 70.8
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 2.5e-168 595.9 419 70.6
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 2.5e-168 595.9 428 69.6
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 3.2e-168 595.5 421 71.3
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 7.1e-168 594.3 419 70.2
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 1.6e-167 593.2 419 69.9
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 4.6e-167 591.7 424 69.3
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 4.6e-167 591.7 424 69.3
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 4.6e-167 591.7 419 69.7
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 6.7e-166 587.8 422 68.7
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 1.5e-165 586.6 447 66.4
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 4.3e-165 585.1 466 63.5
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 9.7e-165 583.9 442 66.5
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 1.3e-164 583.6 418 70.6
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 2.2e-164 582.8 420 68.1
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 8.2e-164 580.9 528 61.0
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 4.1e-163 578.6 424 68.4
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 6.9e-163 577.8 420 68.1
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 1.2e-162 577.0 424 68.4
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 4.5e-162 575.1 422 66.8
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 1.3e-161 573.5 418 65.8
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.1e-160 570.5 424 67.9
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 3.2e-160 568.9 420 65.5
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 5.5e-160 568.2 424 67.7
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 2.1e-159 566.2 418 66.7
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 1.0e-158 563.9 415 68.4
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 5.3e-155 551.6 425 62.8
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 2.1e-151 539.7 422 64.9
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 1.3e-148 530.4 420 59.5
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 1.4e-147 526.9 420 62.1
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 5.3e-147 525.0 415 62.2
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 2.6e-146 522.7 427 60.9
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 1.8e-142 510.0 334 76.6
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 2.2e-137 493.0 429 57.1
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 2.9e-137 492.7 421 57.0
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 3.0e-134 482.6 428 60.3
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 2.0e-133 479.9 423 60.0
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 2.2e-132 476.5 355 66.5
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 2.2e-129 466.5 432 52.8
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 6.5e-129 464.9 422 54.3
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 1.6e-127 460.3 287 76.7
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 3.6e-127 459.1 434 57.4
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 1.0e-118 431.0 353 63.5
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 1.5e-117 427.2 275 76.0
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 3.4e-117 426.0 425 48.2
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 7.0e-115 418.3 420 56.2
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 4.7e-111 405.6 269 75.5
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 5.2e-86 322.4 193 81.9
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 7.1e-83 312.0 427 41.5
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 3.3e-72 276.6 234 56.0
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 6.4e-68 262.3 291 51.2
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 3.1e-62 243.4 183 67.2
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 2.7e-42 177.2 137 67.9
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 5.7e-32 142.9 89 74.2
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 1.7e-31 141.4 101 65.3
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 2.8e-31 140.6 90 74.4
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 1.6e-26 124.8 100 59.0
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 8.5e-12 75.9 346 24.3
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 3.2e-11 73.9 90 48.9
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 3.7e-07 60.5 41 63.4


User provided reference genes

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