Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16297 Trifolium pratense HOM05D000060 ORTHO05D000428 3.1e-63 245.0 125 100.0
Medtr7g096530 Medicago truncatula HOM05D000060 ORTHO05D000428 9.1e-47 190.3 122 85.2
Psat3g059000 Pisum sativum HOM05D000060 ORTHO05D000428 1.2e-41 173.3 128 77.3
Ca_08660_v3 Cicer arietinum L. HOM05D000060 ORTHO05D000428 5.9e-38 161.0 125 76.0
Glyma.19G162900 Glycine max HOM05D000060 ORTHO05D000428 6.6e-29 131.0 127 66.9
Phvul.001G159300 Phaseolus vulgaris HOM05D000060 ORTHO05D000428 6.8e-26 120.9 122 65.6
VMungo1383G2709 Vigna mungo HOM05D000060 ORTHO05D000428 4.6e-22 108.2 123 59.3
Glyma.03G161400 Glycine max HOM05D000060 ORTHO05D000428 5.0e-21 104.8 123 61.8
Phvul.007G195100 Phaseolus vulgaris HOM05D000060 ORTHO05D000428 8.6e-21 104.0 127 63.8
Lalb_Chr01g0019721 Lupinus albus HOM05D000060 ORTHO05D000428 1.6e-19 99.8 121 57.9
Haze_24594 Corylus avellana HOM05D001448 ORTHO05D005781 1.4e-18 96.7 124 57.3
Glyma.10G035000 Glycine max HOM05D000060 ORTHO05D000428 4.0e-18 95.1 125 62.4
Haze_24590 Corylus avellana HOM05D001448 ORTHO05D005781 6.8e-18 94.4 124 56.5
Lalb_Chr02g0142301 Lupinus albus HOM05D000060 ORTHO05D000428 3.4e-17 92.0 124 58.1
CiPaw.04G184900 Carya illinoinensis HOM05D000060 ORTHO05D000428 4.4e-17 91.7 129 55.0
TAR362G1043 Trochodendron aralioides HOM05D000060 ORTHO05D000428 5.8e-17 91.3 120 55.0
Cfa002396 Carpinus fangiana HOM05D000060 ORTHO05D000428 7.5e-17 90.9 126 56.3
MD10G1187700 Malus domestica HOM05D000060 ORTHO05D000428 7.5e-17 90.9 127 52.0
Ciclev10024416m.g Citrus clementina HOM05D000060 ORTHO05D000428 3.7e-16 88.6 125 48.8
Lj5g0016468 Lotus japonicus HOM05D000060 ORTHO05D000428 3.7e-16 88.6 123 56.9
GSVIVG01028295001 Vitis vinifera HOM05D000060 ORTHO05D000428 1.1e-15 87.0 120 52.5
Lalb_Chr06g0162491 Lupinus albus HOM05D000060 ORTHO05D000428 1.4e-15 86.7 125 58.4
CiPaw.03G261400 Carya illinoinensis HOM05D000060 ORTHO05D000428 2.4e-15 85.9 120 57.5
TAR602G0003 Trochodendron aralioides HOM05D000060 ORTHO05D000428 7.0e-15 84.3 120 52.5
Gohir.D08G069800 Gossypium hirsutum HOM05D000060 ORTHO05D000428 1.2e-14 83.6 126 48.4
Gorai.004G073400 Gossypium raimondii HOM05D000060 ORTHO05D000428 1.2e-14 83.6 126 48.4
Prupe.8G227500 Prunus persica HOM05D000060 ORTHO05D000428 2.1e-14 82.8 127 51.2
Gohir.A08G060600 Gossypium hirsutum HOM05D000060 ORTHO05D000428 2.7e-14 82.4 122 48.4
VMungo0720G0881 Vigna mungo HOM05D000060 ORTHO05D000428 2.7e-14 82.4 124 54.8
TWI12G0604 Tripterygium wilfordii HOM05D000060 ORTHO05D000428 3.5e-14 82.0 131 45.0
Dinv22437 Davidia involucrata HOM05D000060 ORTHO05D000428 7.8e-14 80.9 120 55.0
Dinv34598 Davidia involucrata HOM05D000060 ORTHO05D000428 3.0e-13 79.0 125 48.0
arahy.Tifrunner.gnm1.ann1.2Q4UPX Arachis hypogaea HOM05D000060 ORTHO05D000428 1.5e-12 76.6 137 49.6
Atru.chr5.1641 Acer truncatum HOM05D000060 ORTHO05D000428 5.6e-12 74.7 130 45.4
Psat6g057280 Pisum sativum HOM05D000060 ORTHO05D000428 5.6e-12 74.7 121 49.6
Hma1.2p1_0273F.1_g109940 Hydrangea macrophylla HOM05D000060 ORTHO05D000428 1.2e-11 73.6 128 49.2
arahy.Tifrunner.gnm1.ann1.KW2NIT Arachis hypogaea HOM05D000060 ORTHO05D000428 2.1e-11 72.8 126 52.4
Lj1g0016180 Lotus japonicus HOM05D000060 ORTHO05D000428 2.1e-11 72.8 120 47.5
Rhsim01G0266200 Rhododendron simsii HOM05D000060 ORTHO05D000428 2.8e-11 72.4 122 49.2
PSO063G7172 Papaver somniferum HOM05D000060 ORTHO05D000428 4.7e-11 71.6 136 47.8
arahy.Tifrunner.gnm1.ann1.XA7Z28 Arachis hypogaea HOM05D000060 ORTHO05D000428 6.2e-11 71.2 103 54.4
Aqoxy5G00273 Aquilegia oxysepala HOM05D000060 ORTHO05D000428 8.1e-11 70.9 121 47.1
QL09p037784 Quercus lobata HOM05D000060 ORTHO05D000428 1.1e-10 70.5 120 52.5
Gohir.A11G129300 Gossypium hirsutum HOM05D000060 ORTHO05D000428 1.4e-10 70.1 123 47.2
Cpa.g.sc50.43 Carica papaya HOM05D000060 ORTHO05D000428 2.3e-10 69.3 125 48.0
Gohir.D11G135000 Gossypium hirsutum HOM05D000060 ORTHO05D000428 4.0e-10 68.6 123 46.3
Manes.05G087800 Manihot esculenta HOM05D000060 ORTHO05D000428 4.0e-10 68.6 123 43.9
Potri.002G041200 Populus trichocarpa HOM05D000060 ORTHO05D000428 4.0e-10 68.6 128 40.6
Rhsim13G0032300 Rhododendron simsii HOM05D000060 ORTHO05D000428 4.0e-10 68.6 141 41.1
Actinidia21192 Actinidia chinensis HOM05D000060 ORTHO05D000428 5.2e-10 68.2 127 47.2
Gorai.007G144400 Gossypium raimondii HOM05D000060 ORTHO05D000428 8.9e-10 67.4 123 45.5
PSO017G2117 Papaver somniferum HOM05D000060 ORTHO05D000428 8.9e-10 67.4 134 44.8
MSTRG.17483 Avicennia marina HOM05D000060 ORTHO05D000428 2.6e-09 65.9 129 45.0
Lsat_1_v5_gn_9_8941 Lactuca sativa HOM05D000060 ORTHO05D000428 2.6e-09 65.9 123 43.9
Rhsim13G0032600 Rhododendron simsii HOM05D000060 ORTHO05D000428 3.4e-09 65.5 140 41.4
CSS0021263 Camellia sinensis var. sinensis HOM05D000060 ORTHO05D000428 4.4e-09 65.1 120 44.2
CSS0032138 Camellia sinensis var. sinensis HOM05D000060 ORTHO05D000428 4.4e-09 65.1 120 44.2
Cc01_g18520 Coffea canephora HOM05D000060 ORTHO05D000428 4.4e-09 65.1 122 45.9
Actinidia09564 Actinidia chinensis HOM05D000060 ORTHO05D000428 5.8e-09 64.7 128 45.3
MD05G1200900 Malus domestica HOM05D000060 ORTHO05D000428 7.5e-09 64.3 127 42.5
Sabra02G0032800 Salix brachista HOM05D000060 ORTHO05D000428 7.5e-09 64.3 129 41.1
Oeu061426.1 Olea europaea HOM05D000060 ORTHO05D000428 9.9e-09 63.9 128 47.7
HanXRQChr15g0467991 Helianthus annuus HOM05D000060 ORTHO05D000428 1.7e-08 63.2 125 44.0
Nn3g19602 Nelumbo nucifera HOM05D000060 ORTHO05D000428 1.7e-08 63.2 122 45.9
PGSC0003DMG400009713 Solanum tuberosum HOM05D000060 ORTHO05D000428 2.9e-08 62.4 130 43.1
Gohir.D07G217200 Gossypium hirsutum HOM05D000060 ORTHO05D000428 4.9e-08 61.6 122 42.6
Gorai.001G251600 Gossypium raimondii HOM05D000060 ORTHO05D000428 4.9e-08 61.6 122 42.6
Medtr1g070220 Medicago truncatula HOM05D000060 ORTHO05D000428 4.9e-08 61.6 125 43.2
vmacro14853 Vaccinium macrocarpon HOM05D000060 ORTHO05D000428 4.9e-08 61.6 126 40.5
vmacro02642 Vaccinium macrocarpon HOM05D000060 ORTHO05D000428 6.4e-08 61.2 130 42.3
Lj2P1154T56 Lonicera japonica HOM05D000060 ORTHO05D000428 1.1e-07 60.5 129 43.4
Peaxi162Scf00134g01213 Petunia axillaris HOM05D000060 ORTHO05D000428 1.4e-07 60.1 126 46.0
Aqoxy2G03610 Aquilegia oxysepala HOM05D000060 ORTHO05D000428 4.1e-07 58.5 123 39.0
DCAR_007333 Daucus carota HOM05D000060 ORTHO05D000428 4.1e-07 58.5 133 40.6
Nitab4.5_0000086g0170 Nicotiana tabacum HOM05D000060 ORTHO05D000428 5.4e-07 58.2 134 44.0
CAN.G461.12 Capsicum annuum HOM05D000060 ORTHO05D000428 7.1e-07 57.8 135 41.5
Gohir.A07G211200 Gossypium hirsutum HOM05D000060 ORTHO05D000428 9.2e-07 57.4 122 42.6
Potri.005G221900 Populus trichocarpa HOM05D000060 ORTHO05D000428 9.2e-07 57.4 128 38.3
Nitab4.5_0004192g0030 Nicotiana tabacum HOM05D000060 ORTHO05D000428 1.2e-06 57.0 131 44.3
THA.LOC104802243 Tarenaya hassleriana HOM05D000060 ORTHO05D000428 1.2e-06 57.0 132 40.2
ECA247G3473 Erigeron canadensis HOM05D000060 ORTHO05D000428 1.6e-06 56.6 135 40.7
arahy.Tifrunner.gnm1.ann1.TBPN76 Arachis hypogaea HOM05D000060 ORTHO05D000428 2.1e-06 56.2 139 43.9
FAN27G3113 Fragaria x ananassa HOM05D000060 ORTHO05D000428 2.1e-06 56.2 128 43.0
PGR044G0247 Punica granatum HOM05D000060 ORTHO05D000428 2.1e-06 56.2 140 40.0
Lj1A269T39 Lonicera japonica HOM05D000060 ORTHO05D000428 2.7e-06 55.8 120 42.5
Aa31LG1G24290 Aethionema arabicum HOM05D000060 ORTHO05D000428 3.5e-06 55.5 137 38.0
Sp5g04530 Schrenkiella parvula HOM05D000060 ORTHO05D000428 4.6e-06 55.1 131 35.1
THA.LOC104802834 Tarenaya hassleriana HOM05D000060 ORTHO05D000428 4.6e-06 55.1 131 37.4
THA.LOC104822017 Tarenaya hassleriana HOM05D000060 ORTHO05D000428 4.6e-06 55.1 127 41.7
Nn1g02699 Nelumbo nucifera HOM05D000060 ORTHO05D000428 6.0e-06 54.7 120 43.3


User provided reference genes

Program Settings