Gene: Cc01_g18520
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc01_g18520
- Transcript Identifier Cc01_g18520.1
- Gene Type Coding gene
- Location chr1 : 35560469-35561400 : negative
Gene Family Information
- ID HOM05D000060
- #Genes/#Species 4064/97
- Phylogenetic origin
- ID ORTHO05D000428
- #Genes/#Species 946/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- UniProtKB Q9SLB6
- UniProtKB B9H8J9
- UniProtKB Q9SLB7
- UniProtKB Q9M2J7
- UniProtKB D7U2X2
- UniProtKB B9S4L6
- id GSCOCG00016196001
Descriptions
- Description LOB domain-containing protein 16
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT2G42430 |
| GO:0010311 | ISO | PLAZA Integrative Orthology | lateral root formation | AT2G42430 |
| GO:1990110 | ISO | PLAZA Integrative Orthology | callus formation | AT2G42430 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1990841 | ISO | PLAZA Integrative Orthology | promoter-specific chromatin binding | AT2G42430 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT2G42430 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G42430 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004883 | Lateral organ boundaries, LOB |
| Mapman id | Description |
|---|---|
| 15.5.24 | RNA biosynthesis.transcriptional regulation.transcription factor (AS2/LOB) |