Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G16180 Trifolium pratense HOM05D002954 ORTHO05D003353 2.0e-92 342.4 171 100.0
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 3.9e-40 168.7 170 54.7
TPR.G3822 Trifolium pratense HOM05D002954 ORTHO05D003353 8.4e-35 151.0 77 94.8
TPR.G32610 Trifolium pratense HOM05D002954 ORTHO05D003353 1.6e-33 146.7 76 93.4
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 8.7e-32 141.0 187 45.5
Lalb_Chr22g0361071 Lupinus albus HOM05D002954 ORTHO05D003353 2.5e-31 139.4 132 53.8
Psat5g178080 Pisum sativum HOM05D002954 ORTHO05D003353 6.9e-29 131.3 166 48.2
arahy.Tifrunner.gnm1.ann1.LE5ID3 Arachis hypogaea HOM05D009662 ORTHO05D003353 1.5e-28 130.2 170 49.4
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 4.5e-28 128.6 163 46.6
arahy.Tifrunner.gnm1.ann1.N8CY10 Arachis hypogaea HOM05D009662 ORTHO05D003353 1.1e-26 124.0 168 48.2
arahy.Tifrunner.gnm1.ann1.ZY1J0Y Arachis hypogaea HOM05D002954 ORTHO05D003353 1.1e-26 124.0 163 46.0
Nitab4.5_0000051g0340 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.4e-26 123.6 128 50.0
Solyc01g010405.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 2.1e-25 119.8 138 44.9
Nitab4.5_0000386g0150 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.7e-25 119.4 157 43.3
arahy.Tifrunner.gnm1.ann1.0Q01G3 Arachis hypogaea HOM05D002954 ORTHO05D003353 6.0e-25 118.2 104 56.7
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 6.0e-25 118.2 162 40.7
Nitab4.5_0000008g0430 Nicotiana tabacum HOM05D002954 ORTHO05D015034 7.9e-25 117.9 145 46.2
VMungo1309G2137 Vigna mungo HOM05D000006 ORTHO05D000001 7.9e-25 117.9 128 50.8
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 3.9e-24 115.5 163 42.9
Solyc11g044937.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 8.7e-24 114.4 137 43.8
Sopen09g020910 Solanum pennellii HOM05D002954 ORTHO05D003353 2.8e-22 109.4 96 56.2
arahy.Tifrunner.gnm1.ann1.QKP2RW Arachis hypogaea HOM05D002954 ORTHO05D003353 4.8e-22 108.6 82 61.0
Psat0s2772g0080 Pisum sativum HOM05D002954 ORTHO05D003353 4.5e-20 102.1 171 41.5
arahy.Tifrunner.gnm1.ann1.NBL2GQ Arachis hypogaea HOM05D009662 ORTHO05D003353 7.6e-20 101.3 137 48.9
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 1.3e-19 100.5 170 37.1
arahy.Tifrunner.gnm1.ann1.41X87M Arachis hypogaea HOM05D009662 ORTHO05D003353 3.8e-19 99.0 137 49.6
arahy.Tifrunner.gnm1.ann1.35BP8C Arachis hypogaea HOM05D009662 ORTHO05D003353 6.5e-19 98.2 167 38.9
arahy.Tifrunner.gnm1.ann1.T3L04J Arachis hypogaea HOM05D009662 ORTHO05D003353 1.1e-18 97.4 167 39.5
arahy.Tifrunner.gnm1.ann1.2WW1WS Arachis hypogaea HOM05D009662 ORTHO05D003353 1.4e-18 97.1 138 48.6
arahy.Tifrunner.gnm1.ann1.B3S8NN Arachis hypogaea HOM05D002954 ORTHO05D003353 1.9e-18 96.7 104 50.0
arahy.Tifrunner.gnm1.ann1.XG7NYG Arachis hypogaea HOM05D009662 ORTHO05D003353 1.9e-18 96.7 138 48.6
arahy.Tifrunner.gnm1.ann1.4EB8G0 Arachis hypogaea HOM05D009662 ORTHO05D003353 3.2e-18 95.9 138 47.8
arahy.Tifrunner.gnm1.ann1.FG1AAR Arachis hypogaea HOM05D009662 ORTHO05D003353 4.2e-18 95.5 84 60.7
arahy.Tifrunner.gnm1.ann1.1S2QVS Arachis hypogaea HOM05D009662 ORTHO05D003353 7.1e-18 94.7 138 47.8
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 7.1e-18 94.7 155 42.6
arahy.Tifrunner.gnm1.ann1.VKQ8LP Arachis hypogaea HOM05D009662 ORTHO05D003353 7.1e-18 94.7 135 43.7
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.1e-18 94.7 163 39.3
arahy.Tifrunner.gnm1.ann1.C14DTV Arachis hypogaea HOM05D009662 ORTHO05D003353 7.9e-17 91.3 128 45.3
arahy.Tifrunner.gnm1.ann1.HMQ64L Arachis hypogaea HOM05D002954 ORTHO05D003353 1.0e-16 90.9 144 40.3
Sopen04g020530 Solanum pennellii HOM05D002954 ORTHO05D003353 1.0e-16 90.9 132 39.4
Sopen04g009500 Solanum pennellii HOM05D022806 ORTHO05D030645 1.3e-16 90.5 132 38.6
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 1.3e-16 90.5 132 38.6
arahy.Tifrunner.gnm1.ann1.JC8RXL Arachis hypogaea HOM05D009662 ORTHO05D003353 2.3e-16 89.7 138 48.6
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 2.3e-16 89.7 171 35.7
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 2.3e-16 89.7 144 40.3
Solyc10g150115.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 6.7e-16 88.2 96 50.0
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.5e-15 87.0 165 38.2
Peaxi162Scf00485g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 2.5e-15 86.3 148 36.5
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 3.3e-15 85.9 57 68.4
Solyc05g042010.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 7.4e-15 84.7 132 38.6
Nitab4.5_0000229g0050 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.3e-14 84.0 132 40.9
Nitab4.5_0001404g0070 Nicotiana tabacum HOM05D002954 ORTHO05D015034 1.3e-14 84.0 139 40.3
Nitab4.5_0000817g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.8e-14 82.8 75 54.7
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 4.8e-14 82.0 134 38.1
Nitab4.5_0003353g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.2e-14 81.6 78 52.6
arahy.Tifrunner.gnm1.ann1.R8QYAJ Arachis hypogaea HOM05D009662 ORTHO05D003353 8.2e-14 81.3 82 52.4
Nitab4.5_0003410g0070 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-13 80.9 165 37.0
Peaxi162Scf00016g01219 Petunia axillaris HOM05D002954 ORTHO05D003353 1.1e-13 80.9 78 53.8
Peaxi162Scf00173g00019 Petunia axillaris HOM05D002954 ORTHO05D003353 1.1e-13 80.9 78 53.8
arahy.Tifrunner.gnm1.ann1.27XFTQ Arachis hypogaea HOM05D009662 ORTHO05D003353 5.3e-13 78.6 137 41.6
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 5.3e-13 78.6 174 33.9
Solyc07g026873.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 5.3e-13 78.6 66 54.5
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.9e-13 78.2 86 50.0
Sopen01g012120 Solanum pennellii HOM05D000002 ORTHO05D000001 6.9e-13 78.2 159 36.5
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 1.2e-12 77.4 170 33.5
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 1.5e-12 77.0 99 39.4
Nitab4.5_0006167g0030 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.5e-12 77.0 94 46.8
Peaxi162Scf00093g00015 Petunia axillaris HOM05D002954 ORTHO05D010308 1.5e-12 77.0 78 52.6
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 2.6e-12 76.3 173 32.9
Nitab4.5_0000002g0110 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.4e-12 75.9 84 46.4
arahy.Tifrunner.gnm1.ann1.IEL8E2 Arachis hypogaea HOM05D002954 ORTHO05D003353 4.5e-12 75.5 129 38.0
Peaxi162Scf00002g05111 Petunia axillaris HOM05D002954 ORTHO05D003353 1.0e-11 74.3 75 50.7
Psat0s3286g0120 Pisum sativum HOM05D002954 ORTHO05D003353 1.0e-11 74.3 138 38.4
TPR.G36384 Trifolium pratense HOM05D002954 ORTHO05D003353 1.0e-11 74.3 48 81.2
arahy.Tifrunner.gnm1.ann1.D1MK81 Arachis hypogaea HOM05D002954 ORTHO05D003353 1.3e-11 73.9 112 40.2
Nitab4.5_0000416g0230 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.7e-11 73.6 99 44.4
Solyc12g019450.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 2.2e-11 73.2 127 33.9
A09p31580 Brassica napus HOM05D008309 ORTHO05D010308 6.5e-11 71.6 80 43.8
Nitab4.5_0007501g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-10 70.9 98 46.9
Ca_03866_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 1.4e-10 70.5 97 45.4
Nitab4.5_0007595g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.4e-10 70.5 172 32.0
C04p48940 Brassica napus HOM05D008309 ORTHO05D010308 4.2e-10 68.9 99 37.4
Nitab4.5_0000755g0260 Nicotiana tabacum HOM05D002954 ORTHO05D015034 4.2e-10 68.9 123 35.0
Psat0s1021g0160 Pisum sativum HOM05D002954 ORTHO05D003353 5.5e-10 68.6 133 37.6
A03p63400 Brassica napus HOM05D008309 ORTHO05D010308 7.1e-10 68.2 99 36.4
BraA06t25453Z Brassica rapa HOM05D008309 ORTHO05D010308 7.1e-10 68.2 99 36.4
BolC4t26644H Brassica oleracea HOM05D008309 ORTHO05D010308 1.2e-09 67.4 99 36.4
BolC9t56521H Brassica oleracea HOM05D008309 ORTHO05D010308 1.2e-09 67.4 99 36.4
Nitab4.5_0003879g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.2e-09 67.4 110 37.3
PGSC0003DMG400007737 Solanum tuberosum HOM05D002131 ORTHO05D015034 1.2e-09 67.4 112 39.3
arahy.Tifrunner.gnm1.ann1.DXNF3X Arachis hypogaea HOM05D002954 ORTHO05D003353 1.6e-09 67.0 183 31.1
AT1G40087 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 2.1e-09 66.6 106 37.7
Ca_14618_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.1e-09 66.6 105 41.0
Nitab4.5_0003920g0040 Nicotiana tabacum HOM05D002954 ORTHO05D015034 2.1e-09 66.6 124 37.9
Peaxi162Scf00417g00048 Petunia axillaris HOM05D002954 ORTHO05D003353 2.1e-09 66.6 78 46.2
A09p47040 Brassica napus HOM05D008309 ORTHO05D010308 2.7e-09 66.2 99 35.4
BraA09t40169Z Brassica rapa HOM05D008309 ORTHO05D010308 2.7e-09 66.2 99 35.4
Nitab4.5_0000140g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 2.7e-09 66.2 73 47.9
arahy.Tifrunner.gnm1.ann1.IDQF0L Arachis hypogaea HOM05D009662 ORTHO05D003353 3.5e-09 65.9 48 64.6
C04p50470 Brassica napus HOM05D008309 ORTHO05D010308 3.5e-09 65.9 117 33.3
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.5e-09 65.9 175 32.6
A04p20790 Brassica napus HOM05D008309 ORTHO05D010308 6.1e-09 65.1 99 36.4
BolC3t19893H Brassica oleracea HOM05D008309 ORTHO05D010308 6.1e-09 65.1 99 36.4
BolC8t50055H Brassica oleracea HOM05D008309 ORTHO05D010308 6.1e-09 65.1 99 36.4
BraA04t17652Z Brassica rapa HOM05D008309 ORTHO05D010308 6.1e-09 65.1 99 36.4
Nitab4.5_0000062g0230 Nicotiana tabacum HOM05D002954 ORTHO05D015034 6.1e-09 65.1 105 41.9
Psat0s1021g0240 Pisum sativum HOM05D002954 ORTHO05D003353 6.1e-09 65.1 133 36.8
Sopen09g012940 Solanum pennellii HOM05D009662 ORTHO05D000034 1.3e-08 63.9 92 42.4
CAN.G831.2 Capsicum annuum HOM05D002954 ORTHO05D003353 1.8e-08 63.5 62 48.4
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 3.0e-08 62.8 190 27.4
C06p11900 Brassica napus HOM05D008309 ORTHO05D010308 3.0e-08 62.8 98 36.7
BolC6t36323H Brassica oleracea HOM05D008309 ORTHO05D010308 3.0e-08 62.8 98 36.7
CiPaw.09G181600 Carya illinoinensis HOM05D001309 ORTHO05D000385 3.0e-08 62.8 83 42.2
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.0e-08 62.8 76 40.8
CiPaw.10G087600 Carya illinoinensis HOM05D001309 ORTHO05D000385 3.9e-08 62.4 98 37.8
MBI02_g15369_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.9e-08 62.4 75 38.7
C01p42640 Brassica napus HOM05D008309 ORTHO05D010308 5.1e-08 62.0 100 36.0
BolC2t08113H Brassica oleracea HOM05D008309 ORTHO05D010308 5.1e-08 62.0 99 35.4
CAN.G93.14 Capsicum annuum HOM05D009662 ORTHO05D003353 5.1e-08 62.0 63 46.0
Nitab4.5_0006180g0060 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.1e-08 62.0 42 61.9
A01p27270 Brassica napus HOM05D008309 ORTHO05D010308 6.7e-08 61.6 99 36.4
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.7e-08 61.6 77 44.2
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.7e-08 61.6 77 44.2
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.7e-08 61.6 77 44.2
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.7e-08 61.6 77 44.2
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.7e-08 61.6 77 44.2
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.7e-08 61.6 77 44.2
AT3G30200 Arabidopsis thaliana HOM05D008309 ORTHO05D010308 8.7e-08 61.2 110 35.5
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 8.7e-08 61.2 77 44.2
BolC2t10136H Brassica oleracea HOM05D008309 ORTHO05D010308 1.1e-07 60.8 99 33.3
CSS0036507 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.1e-07 60.8 75 42.7
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 1.1e-07 60.8 83 39.8
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.9e-07 60.1 77 42.9
CiPaw.16G105200 Carya illinoinensis HOM05D001309 ORTHO05D000385 1.9e-07 60.1 98 36.7
Lj1g0008605 Lotus japonicus HOM05D002954 ORTHO05D003353 3.3e-07 59.3 171 29.8
AL1G63190 Arabidopsis lyrata HOM05D008309 ORTHO05D010308 4.3e-07 58.9 80 36.2
AL1G66070 Arabidopsis lyrata HOM05D000107 ORTHO05D000062 4.3e-07 58.9 80 36.2
COL.COLO4_33862 Corchorus olitorius HOM05D001309 ORTHO05D000385 4.3e-07 58.9 104 36.5
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 4.3e-07 58.9 99 39.4
A05p38910 Brassica napus HOM05D008309 ORTHO05D010308 5.7e-07 58.5 99 35.4
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 5.7e-07 58.5 102 34.3
arahy.Tifrunner.gnm1.ann1.FX9Q6E Arachis hypogaea HOM05D002954 ORTHO05D003353 7.4e-07 58.2 37 70.3
arahy.Tifrunner.gnm1.ann1.VWW6CB Arachis hypogaea HOM05D002954 ORTHO05D003353 7.4e-07 58.2 37 70.3
Nitab4.5_0003952g0070 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.4e-07 58.2 122 37.7
Psat0s1021g0200 Pisum sativum HOM05D002954 ORTHO05D003353 9.7e-07 57.8 93 39.8
Psat0s10455g0040 Pisum sativum HOM05D002954 ORTHO05D003353 9.7e-07 57.8 93 39.8
Psat0s9469g0040 Pisum sativum HOM05D002954 ORTHO05D003353 9.7e-07 57.8 93 39.8
TAR362G1088 Trochodendron aralioides HOM05D001309 ORTHO05D000385 9.7e-07 57.8 99 36.4
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 1.3e-06 57.4 81 35.8
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 1.3e-06 57.4 98 36.7
COL.COLO4_21802 Corchorus olitorius HOM05D001309 ORTHO05D000385 1.3e-06 57.4 98 36.7
Peaxi162Scf00624g00076 Petunia axillaris HOM05D002954 ORTHO05D003353 1.3e-06 57.4 111 37.8
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.6e-06 57.0 79 38.0
Ca_11947_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 2.2e-06 56.6 153 32.0
ClCG06G005780 Citrullus lanatus HOM05D001309 ORTHO05D000385 2.2e-06 56.6 82 36.6
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 2.8e-06 56.2 92 38.0
arahy.Tifrunner.gnm1.ann1.0IB4TY Arachis hypogaea HOM05D002954 ORTHO05D003353 3.7e-06 55.8 116 36.2
Ca_02603_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 3.7e-06 55.8 95 35.8
Ca_23710_v3 Cicer arietinum L. HOM05D009128 ORTHO05D011389 3.7e-06 55.8 89 34.8
COL.COLO4_29219 Corchorus olitorius HOM05D001309 ORTHO05D000385 3.7e-06 55.8 97 35.1
Peaxi162Scf00318g00919 Petunia axillaris HOM05D002954 ORTHO05D003353 3.7e-06 55.8 110 35.5
TWI34G1252 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 3.7e-06 55.8 95 37.9
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.7e-06 55.8 78 35.9
TWI53G0470 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 4.8e-06 55.5 105 35.2
COL.COLO4_06576 Corchorus olitorius HOM05D001309 ORTHO05D000385 6.3e-06 55.1 78 39.7
Peaxi162Scf01294g00128 Petunia axillaris HOM05D009128 ORTHO05D011389 6.3e-06 55.1 101 34.7
Psat0s4310g0080 Pisum sativum HOM05D016237 ORTHO05D010767 6.3e-06 55.1 100 33.0
TWI15G0427 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 6.3e-06 55.1 105 35.2
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.3e-06 55.1 78 35.9
Ca_28512_v3 Cicer arietinum L. HOM05D009128 ORTHO05D011389 8.2e-06 54.7 89 36.0
ECA234G1533 Erigeron canadensis HOM05D000107 ORTHO05D000062 8.2e-06 54.7 168 28.6
Phvul.011G159900 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 8.2e-06 54.7 142 33.1
Psat0s797g0080 Pisum sativum HOM05D002954 ORTHO05D010767 8.2e-06 54.7 100 33.0


User provided reference genes

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